RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 ADIPOR1Q96A54 375 aa9.07□□□□□ -0.96
CLK3-208ENST00000562626 TESCQ96BS2 214 aa9.07□□□□□ -0.96
CLK3-208ENST00000562626 ELP4Q96EB1 424 aa9.07□□□□□ -0.96
CLK3-208ENST00000562626 GIMAP5Q96F15 307 aa9.07□□□□□ -0.96
CLK3-208ENST00000562626 VPS50Q96JG6 964 aa9.07□□□□□ -0.96
CLK3-208ENST00000562626 MAGED4Q96JG8 741 aa9.07□□□□□ -0.96
CLK3-208ENST00000562626 SIGLEC12Q96PQ1 595 aa9.07□□□□□ -0.96
CLK3-208ENST00000562626 GAL3ST4Q96RP7 486 aa9.07□□□□□ -0.96
CLK3-208ENST00000562626 ARHGAP9Q9BRR9 750 aa9.07□□□□□ -0.96
CLK3-208ENST00000562626 INPP5KQ9BT40 448 aa9.07□□□□□ -0.96
CLK3-208ENST00000562626 ITPAQ9BY32 194 aa9.07□□□□□ -0.96
CLK3-208ENST00000562626 MFRPQ9BY79 579 aa9.07□□□□□ -0.96
CLK3-208ENST00000562626 HES7Q9BYE0 225 aa9.07□□□□□ -0.96
CLK3-208ENST00000562626 DEFB126Q9BYW3 111 aa9.07□□□□□ -0.96
CLK3-208ENST00000562626 WWTR1Q9GZV5 400 aa9.07□□□□□ -0.96
CLK3-208ENST00000562626 SLC52A3Q9NQ40 469 aa9.07□□□□□ -0.96
CLK3-208ENST00000562626 SLC6A13Q9NSD5 602 aa9.07□□□□□ -0.96
CLK3-208ENST00000562626 GIMAP4Q9NUV9 329 aa9.07□□□□□ -0.96
CLK3-208ENST00000562626 LUZP4Q9P127 313 aa9.07□□□□□ -0.96
CLK3-208ENST00000562626 PSME2Q9UL46 239 aa9.07□□□□□ -0.96
CLK3-208ENST00000562626 CFAP46Q8IYW2 2715 aa9.07□□□□□ -0.96
CLK3-208ENST00000562626 DNAJC13O75165 2243 aa9.07□□□□□ -0.96
CLK3-208ENST00000562626 MKRN2OSH3BPM6 223 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 KALRNO60229 2985 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 PLOD3O60568 738 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 ITGA10O75578 1167 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 C1QL1O75973 258 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 OR2J2O76002 312 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 ZFAND5O76080 213 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 ABCB1P08183 1280 aaPredicted RBP9.06□□□□□ -0.96
CLK3-208ENST00000562626 ICAM2P13598 275 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 IDO1P14902 403 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 CAPN3P20807 821 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 NTSP30990 170 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 MRPL19P49406 292 aaKnown RBP9.06□□□□□ -0.96
CLK3-208ENST00000562626 CORO7P57737 925 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 HBA1P69905 142 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 SRSF11Q05519 484 aaKnown RBP9.06□□□□□ -0.96
CLK3-208ENST00000562626 BIKQ13323 160 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 GAB1Q13480 694 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 UBAP2LQ14157 1087 aaKnown RBP9.06□□□□□ -0.96
CLK3-208ENST00000562626 GSTA3Q16772 222 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 AGAP7PQ5VUJ5 663 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 ISLR2Q6UXK2 745 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 HSDL2Q6YN16 418 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 GK5Q6ZS86 529 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 ASB18Q6ZVZ8 466 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 R3HCC1LQ7Z5L2 792 aaKnown RBP9.06□□□□□ -0.96
CLK3-208ENST00000562626 PTRH1Q86Y79 214 aaKnown RBP9.06□□□□□ -0.96
CLK3-208ENST00000562626 PRR22Q8IZ63 422 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 Q8NA96 180 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 OR4N2Q8NGD1 307 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 OR8J2Q8NGG1 315 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 STON2Q8WXE9 905 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 VPS33AQ96AX1 596 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 OTUB1Q96FW1 271 aaPredicted RBP9.06□□□□□ -0.96
CLK3-208ENST00000562626 CHMP6Q96FZ7 201 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 C16orf58Q96GQ5 468 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 AGAP4Q96P64 663 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 RASL10BQ96S79 203 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 UBL7Q96S82 380 aaPredicted RBP9.06□□□□□ -0.96
CLK3-208ENST00000562626 BHLHE41Q9C0J9 482 aaPredicted RBP9.06□□□□□ -0.96
CLK3-208ENST00000562626 FAM107BQ9H098 131 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 NXF5Q9H1B4 397 aaKnown RBP9.06□□□□□ -0.96
CLK3-208ENST00000562626 ADNPQ9H2P0 1102 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 SERHL2Q9H4I8 314 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 SERHLQ9NQF3 203 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 ACSS1Q9NUB1 689 aaPredicted RBP9.06□□□□□ -0.96
CLK3-208ENST00000562626 ZIM2Q9NZV7 527 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 KLHL14Q9P2G3 628 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 MYOTQ9UBF9 498 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 COPS7AQ9UBW8 275 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 BCAP29Q9UHQ4 241 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 C19orf53Q9UNZ5 99 aaPredicted RBP9.06□□□□□ -0.96
CLK3-208ENST00000562626 MED12Q93074 2177 aa9.06□□□□□ -0.96
CLK3-208ENST00000562626 KIAA1549Q9HCM3 1950 aa9.05□□□□□ -0.96
CLK3-208ENST00000562626 A0A087WV62 115 aa9.05□□□□□ -0.96
CLK3-208ENST00000562626 A0A1W2PRB8 838 aa9.05□□□□□ -0.96
CLK3-208ENST00000562626 PLOD2O00469 737 aa9.05□□□□□ -0.96
CLK3-208ENST00000562626 SLC22A3O75751 556 aa9.05□□□□□ -0.96
CLK3-208ENST00000562626 OR6B1O95007 311 aa9.05□□□□□ -0.96
CLK3-208ENST00000562626 ALPPP05187 535 aa9.05□□□□□ -0.96
CLK3-208ENST00000562626 CT45A8P0DMV1 189 aa9.05□□□□□ -0.96
CLK3-208ENST00000562626 CT45A9P0DMV2 189 aa9.05□□□□□ -0.96
CLK3-208ENST00000562626 TROVE2P10155 538 aaKnown RBP eCLIP9.05□□□□□ -0.96
CLK3-208ENST00000562626 PTPN6P29350 595 aa9.05□□□□□ -0.96
CLK3-208ENST00000562626 MPIP34949 423 aa9.05□□□□□ -0.96
CLK3-208ENST00000562626 CD96P40200 585 aa9.05□□□□□ -0.96
CLK3-208ENST00000562626 SOX3P41225 446 aa9.05□□□□□ -0.96
CLK3-208ENST00000562626 KIR3DL1P43629 444 aa9.05□□□□□ -0.96
CLK3-208ENST00000562626 ARFIP2P53365 341 aa9.05□□□□□ -0.96
CLK3-208ENST00000562626 MANFP55145 182 aaKnown RBP9.05□□□□□ -0.96
CLK3-208ENST00000562626 TUBA3CQ13748 450 aa9.05□□□□□ -0.96
CLK3-208ENST00000562626 MLC1Q15049 377 aa9.05□□□□□ -0.96
CLK3-208ENST00000562626 GTDC1Q4AE62 458 aa9.05□□□□□ -0.96
CLK3-208ENST00000562626 TIGD2Q4W5G0 525 aa9.05□□□□□ -0.96
CLK3-208ENST00000562626 LACTB2Q53H82 288 aaPredicted RBP9.05□□□□□ -0.96
CLK3-208ENST00000562626 CT45A2Q5DJT8 189 aa9.05□□□□□ -0.96
CLK3-208ENST00000562626 EXOSC6Q5RKV6 272 aaKnown RBP9.05□□□□□ -0.96
CLK3-208ENST00000562626 TUBA3EQ6PEY2 450 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms