RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 PIGAP37287 484 aa14.25□□□□□ -0.13
CCDC113-203ENST00000561517 DNASE1L1P49184 302 aa14.25□□□□□ -0.13
CCDC113-203ENST00000561517 PLGLB1Q02325 96 aa14.25□□□□□ -0.13
CCDC113-203ENST00000561517 ZNF844Q08AG5 666 aa14.25□□□□□ -0.13
CCDC113-203ENST00000561517 EXOSC7Q15024 291 aaKnown RBP14.25□□□□□ -0.13
CCDC113-203ENST00000561517 KIAA0040Q15053 153 aa14.25□□□□□ -0.13
CCDC113-203ENST00000561517 LTB4RQ15722 352 aa14.25□□□□□ -0.13
CCDC113-203ENST00000561517 TRMT12Q53H54 448 aaKnown RBP14.25□□□□□ -0.13
CCDC113-203ENST00000561517 ZNF628Q5EBL2 1059 aa14.25□□□□□ -0.13
CCDC113-203ENST00000561517 HIST2H2BCQ6DN03 193 aa14.25□□□□□ -0.13
CCDC113-203ENST00000561517 FAM71E1Q6IPT2 247 aa14.25□□□□□ -0.13
CCDC113-203ENST00000561517 SLC22A16Q86VW1 577 aa14.25□□□□□ -0.13
CCDC113-203ENST00000561517 CCDC116Q8IYX3 515 aa14.25□□□□□ -0.13
CCDC113-203ENST00000561517 OR10G3Q8NGC4 313 aa14.25□□□□□ -0.13
CCDC113-203ENST00000561517 ITLN2Q8WWU7 325 aaPredicted RBP14.25□□□□□ -0.13
CCDC113-203ENST00000561517 EXOSC8Q96B26 276 aaKnown RBP14.25□□□□□ -0.13
CCDC113-203ENST00000561517 ERP27Q96DN0 273 aa14.25□□□□□ -0.13
CCDC113-203ENST00000561517 MECRQ9BV79 373 aa14.25□□□□□ -0.13
CCDC113-203ENST00000561517 MYNNQ9NPC7 610 aa14.25□□□□□ -0.13
CCDC113-203ENST00000561517 SLC35C2Q9NQQ7 365 aa14.25□□□□□ -0.13
CCDC113-203ENST00000561517 TUBA8Q9NY65 449 aaPredicted RBP14.25□□□□□ -0.13
CCDC113-203ENST00000561517 TAS2R7Q9NYW3 318 aa14.25□□□□□ -0.13
CCDC113-203ENST00000561517 SENP1Q9P0U3 644 aa14.25□□□□□ -0.13
CCDC113-203ENST00000561517 SH3BGRL2Q9UJC5 107 aa14.25□□□□□ -0.13
CCDC113-203ENST00000561517 CNOT11Q9UKZ1 510 aaKnown RBP14.25□□□□□ -0.13
CCDC113-203ENST00000561517 ANKRD33BA6NCL7 494 aa14.24□□□□□ -0.13
CCDC113-203ENST00000561517 FAM166BA8MTA8 275 aa14.24□□□□□ -0.13
CCDC113-203ENST00000561517 CAPN14A8MX76 684 aa14.24□□□□□ -0.13
CCDC113-203ENST00000561517 SLC28A1O00337 649 aa14.24□□□□□ -0.13
CCDC113-203ENST00000561517 ZNHIT1O43257 154 aa14.24□□□□□ -0.13
CCDC113-203ENST00000561517 CHRNGP07510 517 aa14.24□□□□□ -0.13
CCDC113-203ENST00000561517 PCSK2P16519 638 aa14.24□□□□□ -0.13
CCDC113-203ENST00000561517 PTGS2P35354 604 aa14.24□□□□□ -0.13
CCDC113-203ENST00000561517 ETV4P43268 484 aa14.24□□□□□ -0.13
CCDC113-203ENST00000561517 TMED10P49755 219 aaKnown RBP14.24□□□□□ -0.13
CCDC113-203ENST00000561517 NRG3P56975 720 aa14.24□□□□□ -0.13
CCDC113-203ENST00000561517 C2orf80Q0P641 193 aa14.24□□□□□ -0.13
CCDC113-203ENST00000561517 RPS6KA2Q15349 733 aa14.24□□□□□ -0.13
CCDC113-203ENST00000561517 KRT71Q3SY84 523 aa14.24□□□□□ -0.13
CCDC113-203ENST00000561517 KANK2Q63ZY3 851 aa14.24□□□□□ -0.13
CCDC113-203ENST00000561517 NOXRED1Q6NXP6 359 aa14.24□□□□□ -0.13
CCDC113-203ENST00000561517 TMEM64Q6YI46 380 aa14.24□□□□□ -0.13
CCDC113-203ENST00000561517 Q6ZSR9 355 aa14.24□□□□□ -0.13
CCDC113-203ENST00000561517 DOLPP1Q86YN1 238 aa14.24□□□□□ -0.13
CCDC113-203ENST00000561517 FAM109AQ8N4B1 249 aa14.24□□□□□ -0.13
CCDC113-203ENST00000561517 TMEM251Q8N6I4 163 aa14.24□□□□□ -0.13
CCDC113-203ENST00000561517 SIMC1Q8NDZ2 872 aa14.24□□□□□ -0.13
CCDC113-203ENST00000561517 FAM13CQ8NE31 585 aa14.24□□□□□ -0.13
CCDC113-203ENST00000561517 FAM57AQ8TBR7 257 aa14.24□□□□□ -0.13
CCDC113-203ENST00000561517 NXF5Q9H1B4 397 aaKnown RBP14.24□□□□□ -0.13
CCDC113-203ENST00000561517 DEFB127Q9H1M4 99 aa14.24□□□□□ -0.13
CCDC113-203ENST00000561517 TUBB1Q9H4B7 451 aa14.24□□□□□ -0.13
CCDC113-203ENST00000561517 PFDN4Q9NQP4 134 aa14.24□□□□□ -0.13
CCDC113-203ENST00000561517 GIMAP4Q9NUV9 329 aa14.24□□□□□ -0.13
CCDC113-203ENST00000561517 BCAP29Q9UHQ4 241 aa14.24□□□□□ -0.13
CCDC113-203ENST00000561517 ENTPD4Q9Y227 616 aa14.24□□□□□ -0.13
CCDC113-203ENST00000561517 MEMO1Q9Y316 297 aa14.24□□□□□ -0.13
CCDC113-203ENST00000561517 POLR3HQ9Y535 204 aaPredicted RBP14.24□□□□□ -0.13
CCDC113-203ENST00000561517 PTGDR2Q9Y5Y4 395 aa14.24□□□□□ -0.13
CCDC113-203ENST00000561517 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.24□□□□□ -0.13
CCDC113-203ENST00000561517 MED12Q93074 2177 aa14.23□□□□□ -0.13
CCDC113-203ENST00000561517 PRRG2O14669 202 aa14.23□□□□□ -0.13
CCDC113-203ENST00000561517 TP53I11O14683 189 aa14.23□□□□□ -0.13
CCDC113-203ENST00000561517 CDC40O60508 579 aaKnown RBP eCLIP14.23□□□□□ -0.13
CCDC113-203ENST00000561517 SEC22BO75396 215 aa14.23□□□□□ -0.13
CCDC113-203ENST00000561517 BCAS2O75934 225 aaPredicted RBP14.23□□□□□ -0.13
CCDC113-203ENST00000561517 IGHG3P01860 377 aa14.23□□□□□ -0.13
CCDC113-203ENST00000561517 NEFHP12036 1026 aa14.23□□□□□ -0.13
CCDC113-203ENST00000561517 NAGAP17050 411 aa14.23□□□□□ -0.13
CCDC113-203ENST00000561517 SERPINB5P36952 375 aa14.23□□□□□ -0.13
CCDC113-203ENST00000561517 EMDP50402 254 aa14.23□□□□□ -0.13
CCDC113-203ENST00000561517 MRPS35P82673 323 aaKnown RBP14.23□□□□□ -0.13
CCDC113-203ENST00000561517 ADORA2A-AS1P86434 159 aa14.23□□□□□ -0.13
CCDC113-203ENST00000561517 PRSS53Q2L4Q9 553 aa14.23□□□□□ -0.13
CCDC113-203ENST00000561517 UGT3A2Q3SY77 523 aa14.23□□□□□ -0.13
CCDC113-203ENST00000561517 ARL13AQ5H913 290 aaPredicted RBP14.23□□□□□ -0.13
CCDC113-203ENST00000561517 PRAMEF20Q5VT98 475 aa14.23□□□□□ -0.13
CCDC113-203ENST00000561517 ARHGAP11AQ6P4F7 1023 aa14.23□□□□□ -0.13
CCDC113-203ENST00000561517 PAOXQ6QHF9 649 aa14.23□□□□□ -0.13
CCDC113-203ENST00000561517 RPTNQ6XPR3 784 aa14.23□□□□□ -0.13
CCDC113-203ENST00000561517 IKBIPQ70UQ0 350 aa14.23□□□□□ -0.13
CCDC113-203ENST00000561517 ZNF808Q8N4W9 903 aaPredicted RBP14.23□□□□□ -0.13
CCDC113-203ENST00000561517 OR52R1Q8NGF1 315 aa14.23□□□□□ -0.13
CCDC113-203ENST00000561517 OR6Y1Q8NGX8 325 aa14.23□□□□□ -0.13
CCDC113-203ENST00000561517 OR2T11Q8NH01 316 aa14.23□□□□□ -0.13
CCDC113-203ENST00000561517 SPPL2AQ8TCT8 520 aa14.23□□□□□ -0.13
CCDC113-203ENST00000561517 NTNG2Q96CW9 530 aa14.23□□□□□ -0.13
CCDC113-203ENST00000561517 HSPBAP1Q96EW2 488 aa14.23□□□□□ -0.13
CCDC113-203ENST00000561517 FCRL1Q96LA6 429 aa14.23□□□□□ -0.13
CCDC113-203ENST00000561517 PHF12Q96QT6 1004 aa14.23□□□□□ -0.13
CCDC113-203ENST00000561517 SECISBP2Q96T21 854 aaKnown RBP14.23□□□□□ -0.13
CCDC113-203ENST00000561517 ITPAQ9BY32 194 aa14.23□□□□□ -0.13
CCDC113-203ENST00000561517 LRTM1Q9HBL6 345 aa14.23□□□□□ -0.13
CCDC113-203ENST00000561517 C1orf109Q9NX04 203 aa14.23□□□□□ -0.13
CCDC113-203ENST00000561517 PRODH2Q9UF12 536 aa14.23□□□□□ -0.13
CCDC113-203ENST00000561517 EXO1Q9UQ84 846 aaKnown RBP14.23□□□□□ -0.13
CCDC113-203ENST00000561517 DNAJC15Q9Y5T4 150 aa14.23□□□□□ -0.13
CCDC113-203ENST00000561517 ARHGAP21Q5T5U3 1957 aa14.23□□□□□ -0.13
CCDC113-203ENST00000561517 A0A1B0GVC2 190 aa14.22□□□□□ -0.13
CCDC113-203ENST00000561517 LRRC3CA6NJW4 275 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms