RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 SDCCAG3Q96C92 435 aa14.69□□□□□ -0.06
LMX1B-204ENST00000561065 STMN4Q9H169 189 aaPredicted RBP14.69□□□□□ -0.06
LMX1B-204ENST00000561065 ZNF703Q9H7S9 590 aaPredicted RBP14.69□□□□□ -0.06
LMX1B-204ENST00000561065 CHST11Q9NPF2 352 aa14.69□□□□□ -0.06
LMX1B-204ENST00000561065 PNPLA3Q9NST1 481 aa14.69□□□□□ -0.06
LMX1B-204ENST00000561065 GIMAP4Q9NUV9 329 aa14.69□□□□□ -0.06
LMX1B-204ENST00000561065 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.69□□□□□ -0.06
LMX1B-204ENST00000561065 CES1P1Q9UKY3 287 aa14.69□□□□□ -0.06
LMX1B-204ENST00000561065 CNOT11Q9UKZ1 510 aaKnown RBP14.69□□□□□ -0.06
LMX1B-204ENST00000561065 RAB21Q9UL25 225 aa14.69□□□□□ -0.06
LMX1B-204ENST00000561065 EMCNQ9ULC0 261 aa14.69□□□□□ -0.06
LMX1B-204ENST00000561065 DTX4Q9Y2E6 619 aa14.69□□□□□ -0.06
LMX1B-204ENST00000561065 V9GYY5 206 aaPredicted RBP14.69□□□□□ -0.06
LMX1B-204ENST00000561065 TACC2O95359 2948 aa14.69□□□□□ -0.06
LMX1B-204ENST00000561065 ARHGAP21Q5T5U3 1957 aa14.69□□□□□ -0.06
LMX1B-204ENST00000561065 FOXO6A8MYZ6 492 aa14.68□□□□□ -0.06
LMX1B-204ENST00000561065 NPIPA2E9PIF3 369 aa14.68□□□□□ -0.06
LMX1B-204ENST00000561065 NPIPA3F8WFD2 350 aa14.68□□□□□ -0.06
LMX1B-204ENST00000561065 P04436 131 aa14.68□□□□□ -0.06
LMX1B-204ENST00000561065 RFPL3SP0C7P2 107 aa14.68□□□□□ -0.06
LMX1B-204ENST00000561065 CPMP14384 443 aa14.68□□□□□ -0.06
LMX1B-204ENST00000561065 CSNK2A2P19784 350 aaPredicted RBP14.68□□□□□ -0.06
LMX1B-204ENST00000561065 SERPINB5P36952 375 aa14.68□□□□□ -0.06
LMX1B-204ENST00000561065 FUT7Q11130 342 aa14.68□□□□□ -0.06
LMX1B-204ENST00000561065 DUSP8Q13202 625 aa14.68□□□□□ -0.06
LMX1B-204ENST00000561065 RGS9BPQ6ZS82 235 aa14.68□□□□□ -0.06
LMX1B-204ENST00000561065 FRMD7Q6ZUT3 714 aa14.68□□□□□ -0.06
LMX1B-204ENST00000561065 ZNF295-AS1Q8N0V1 137 aa14.68□□□□□ -0.06
LMX1B-204ENST00000561065 TAGAPQ8N103 731 aa14.68□□□□□ -0.06
LMX1B-204ENST00000561065 FBXW8Q8N3Y1 598 aa14.68□□□□□ -0.06
LMX1B-204ENST00000561065 C1orf52Q8N6N3 182 aaKnown RBP14.68□□□□□ -0.06
LMX1B-204ENST00000561065 ACBD4Q8NC06 268 aa14.68□□□□□ -0.06
LMX1B-204ENST00000561065 SIMC1Q8NDZ2 872 aa14.68□□□□□ -0.06
LMX1B-204ENST00000561065 CHTF18Q8WVB6 975 aa14.68□□□□□ -0.06
LMX1B-204ENST00000561065 TP63Q9H3D4 680 aaPredicted RBP14.68□□□□□ -0.06
LMX1B-204ENST00000561065 GSTO2Q9H4Y5 243 aa14.68□□□□□ -0.06
LMX1B-204ENST00000561065 SPRR3Q9UBC9 169 aa14.68□□□□□ -0.06
LMX1B-204ENST00000561065 PCDHA9Q9Y5H5 950 aa14.68□□□□□ -0.06
LMX1B-204ENST00000561065 A0A1B0GVC2 190 aa14.67□□□□□ -0.06
LMX1B-204ENST00000561065 ATP6AP2A0A1C7CYW4 349 aa14.67□□□□□ -0.06
LMX1B-204ENST00000561065 SLC28A1O00337 649 aa14.67□□□□□ -0.06
LMX1B-204ENST00000561065 CTIFO43310 598 aaKnown RBP14.67□□□□□ -0.06
LMX1B-204ENST00000561065 RGS14O43566 566 aa14.67□□□□□ -0.06
LMX1B-204ENST00000561065 ATP6AP2O75787 350 aa14.67□□□□□ -0.06
LMX1B-204ENST00000561065 COX6B1P14854 86 aa14.67□□□□□ -0.06
LMX1B-204ENST00000561065 DDX5P17844 614 aaKnown RBP14.67□□□□□ -0.06
LMX1B-204ENST00000561065 S1PR1P21453 382 aa14.67□□□□□ -0.06
LMX1B-204ENST00000561065 PTGER4P35408 488 aa14.67□□□□□ -0.06
LMX1B-204ENST00000561065 MGAT2Q10469 447 aa14.67□□□□□ -0.06
LMX1B-204ENST00000561065 NTRK2Q16620 822 aa14.67□□□□□ -0.06
LMX1B-204ENST00000561065 SLC22A10Q63ZE4 541 aa14.67□□□□□ -0.06
LMX1B-204ENST00000561065 BICRALQ6AI39 1079 aa14.67□□□□□ -0.06
LMX1B-204ENST00000561065 FAM180BQ6P0A1 224 aa14.67□□□□□ -0.06
LMX1B-204ENST00000561065 SLC48A1Q6P1K1 146 aa14.67□□□□□ -0.06
LMX1B-204ENST00000561065 GALNT18Q6P9A2 607 aa14.67□□□□□ -0.06
LMX1B-204ENST00000561065 FAM13CQ8NE31 585 aa14.67□□□□□ -0.06
LMX1B-204ENST00000561065 OR7G1Q8NGA0 311 aa14.67□□□□□ -0.06
LMX1B-204ENST00000561065 OR5M9Q8NGP3 310 aa14.67□□□□□ -0.06
LMX1B-204ENST00000561065 OR5M3Q8NGP4 307 aa14.67□□□□□ -0.06
LMX1B-204ENST00000561065 ADIPOR1Q96A54 375 aa14.67□□□□□ -0.06
LMX1B-204ENST00000561065 TM4SF18Q96CE8 201 aa14.67□□□□□ -0.06
LMX1B-204ENST00000561065 SIRT5Q9NXA8 310 aa14.67□□□□□ -0.06
LMX1B-204ENST00000561065 TIMM22Q9Y584 194 aa14.67□□□□□ -0.06
LMX1B-204ENST00000561065 FAM215AQ9Y5M1 114 aa14.67□□□□□ -0.06
LMX1B-204ENST00000561065 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.67□□□□□ -0.06
LMX1B-204ENST00000561065 INTS1Q8N201 2190 aaKnown RBP14.67□□□□□ -0.06
LMX1B-204ENST00000561065 POLQO75417 2590 aa14.67□□□□□ -0.06
LMX1B-204ENST00000561065 PCDH7O60245 1069 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 BCAS2O75934 225 aaPredicted RBP14.66□□□□□ -0.06
LMX1B-204ENST00000561065 NT5EP21589 574 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 SERPINB3P29508 390 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 NRG3P56975 720 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 NUP107P57740 925 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 FBXW4P57775 412 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 LTB4RQ15722 352 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 PRICKLE4Q2TBC4 344 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 RTL6Q6ICC9 239 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 PAOXQ6QHF9 649 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 FAM111BQ6SJ93 734 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 TRIM46Q7Z4K8 759 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 GDF7Q7Z4P5 450 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 C10orf107Q8IVU9 208 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 KIRREL3Q8IZU9 778 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 PPP1R14CQ8TAE6 165 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 FAM111AQ96PZ2 611 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 KCNA7Q96RP8 456 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 CCT7Q99832 543 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 ACPTQ9BZG2 426 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 OR10A5Q9H207 317 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 MAT2BQ9NZL9 334 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 HEY2Q9UBP5 337 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 RNF6Q9Y252 685 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 KIAA1549Q9HCM3 1950 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 C2orf92A0A1B0GVN3 265 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 OR14I1A6ND48 311 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 AQP7O14520 342 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 AZIN1O14977 448 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 NPHS1O60500 1241 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 ERAL1O75616 437 aaKnown RBP14.66□□□□□ -0.06
LMX1B-204ENST00000561065 SNUPNO95149 360 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms