RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 SUN3Q8TAQ9 357 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 DNAJB14Q8TBM8 379 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 CT55Q8WUE5 264 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 ADAMTS14Q8WXS8 1223 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 GTF2H4Q92759 462 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 KAT2AQ92830 837 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 MR1Q95460 341 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 C8orf44Q96CB5 159 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 SLC7A6OSQ96CW6 309 aaPredicted RBP4.88□□□□□ -1.63
SPG11-220ENST00000559933 CLPTM1LQ96KA5 538 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 OR52E6Q96RD3 313 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 TAAR9Q96RI9 348 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 ZBTB18Q99592 522 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 DUSP26Q9BV47 211 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 FAIM2Q9BWQ8 316 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 KRTAP9-9Q9BYP9 154 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 KRTAP9-4Q9BYQ2 154 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 ROGDIQ9GZN7 287 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 VN1R1Q9GZP7 353 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 GLIPR2Q9H4G4 154 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 IKZF5Q9H5V7 419 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 RPF2Q9H7B2 306 aaKnown RBP4.88□□□□□ -1.63
SPG11-220ENST00000559933 CXorf36Q9H7Y0 433 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 LYRM4Q9HD34 91 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 FBXO8Q9NRD0 319 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 SIRT3Q9NTG7 399 aaPredicted RBP4.88□□□□□ -1.63
SPG11-220ENST00000559933 SLC25A37Q9NYZ2 338 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 IFT80Q9P2H3 777 aaPredicted RBP4.88□□□□□ -1.63
SPG11-220ENST00000559933 TAGLN3Q9UI15 199 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 PHF11Q9UIL8 331 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 CROTQ9UKG9 612 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 SRPK3Q9UPE1 567 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 POLR3KQ9Y2Y1 108 aaPredicted RBP4.88□□□□□ -1.63
SPG11-220ENST00000559933 SPTBN4Q9H254 2564 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 ANKRD11Q6UB99 2663 aaPredicted RBP4.88□□□□□ -1.63
SPG11-220ENST00000559933 A0A088AWK7 358 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 LOC101059948A0A1B0GTJ6 334 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 A0A1W2PP18 115 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 A0A1W2PRB8 838 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.87□□□□□ -1.63
SPG11-220ENST00000559933 H0YIG0 161 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 EBAG9O00559 213 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 ANGPT2O15123 496 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 CFLARO15519 480 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 RRP9O43818 475 aaKnown RBP4.87□□□□□ -1.63
SPG11-220ENST00000559933 RECKO95980 971 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 HPXP02790 462 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 UMODP07911 640 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 CELA2AP08217 269 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 ZGLP1P0C6A0 271 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 CPMP14384 443 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 ZNF10P21506 573 aaPredicted RBP4.87□□□□□ -1.63
SPG11-220ENST00000559933 PTPN6P29350 595 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 MSX2P35548 267 aaPredicted RBP4.87□□□□□ -1.63
SPG11-220ENST00000559933 CPOXP36551 454 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 BUD31P41223 144 aaPredicted RBP4.87□□□□□ -1.63
SPG11-220ENST00000559933 MC3RP41968 323 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 TSFMP43897 325 aaKnown RBP4.87□□□□□ -1.63
SPG11-220ENST00000559933 ERFP50548 548 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 PGDP52209 483 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 SLC7A2P52569 658 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 ARSFP54793 590 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 C21orf58P58505 322 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 KCNJ2P63252 427 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 HBA1P69905 142 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 DCDP81605 110 aaKnown RBP4.87□□□□□ -1.63
SPG11-220ENST00000559933 MXRA7P84157 204 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 EEF1A2Q05639 463 aaKnown RBP4.87□□□□□ -1.63
SPG11-220ENST00000559933 ACTN3Q08043 901 aaPredicted RBP4.87□□□□□ -1.63
SPG11-220ENST00000559933 ABHD18Q0P651 414 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 SLC13A2Q13183 592 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 IL10RAQ13651 578 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 IL11RAQ14626 422 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 KRT72Q14CN4 511 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 HEPACAMQ14CZ8 416 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 EXOSC7Q15024 291 aaKnown RBP4.87□□□□□ -1.63
SPG11-220ENST00000559933 NNATQ16517 81 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 MAPKAPK3Q16644 382 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 FAM214AQ32MH5 1076 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 MMEL1Q495T6 779 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 TRMT12Q53H54 448 aaKnown RBP4.87□□□□□ -1.63
SPG11-220ENST00000559933 MANEAQ5SRI9 462 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 C6orf10Q5SRN2 563 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 FAM91A1Q658Y4 838 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 C6orf15Q6UXA7 325 aaPredicted RBP4.87□□□□□ -1.63
SPG11-220ENST00000559933 CEACAM20Q6UY09 585 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 DLEU7Q6UYE1 221 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 CCDC121Q6ZUS5 278 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 ZNF771Q7L3S4 317 aaPredicted RBP4.87□□□□□ -1.63
SPG11-220ENST00000559933 CAMKMTQ7Z624 323 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 DHDDSQ86SQ9 333 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 SPPL2CQ8IUH8 684 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 LILRA2Q8N149 483 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 LRRC25Q8N386 305 aaPredicted RBP4.87□□□□□ -1.63
SPG11-220ENST00000559933 RNF148Q8N7C7 305 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 ENDOVQ8N8Q3 282 aaKnown RBP4.87□□□□□ -1.63
SPG11-220ENST00000559933 FAM156AQ8NDB6 213 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 OR7G2Q8NG99 324 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 RP9Q8TA86 221 aaKnown RBP4.87□□□□□ -1.63
SPG11-220ENST00000559933 STT3BQ8TCJ2 826 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms