RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 BAHD1Q8TBE0 780 aaPredicted RBP16.73■□□□□ 0.27
SNX1-208ENST00000559844 UTP15Q8TED0 518 aaKnown RBP16.73■□□□□ 0.27
SNX1-208ENST00000559844 SERINC2Q96SA4 455 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 PIP5K1AQ99755 562 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 NPLQ9BXD5 320 aaPredicted RBP16.73■□□□□ 0.27
SNX1-208ENST00000559844 OR51I1Q9H343 314 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 UCK1Q9HA47 277 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 ZNF780BQ9Y6R6 833 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 ENPP4Q9Y6X5 453 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 LILRA5A6NI73 299 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 GLOD5A6NK44 160 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 PRAMEF10O60809 474 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 PRKRAO75569 313 aaKnown RBP16.73■□□□□ 0.27
SNX1-208ENST00000559844 NR2F6P10588 404 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 ANXA8P13928 327 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 TNFRSF1BP20333 461 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 MATN1P21941 496 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 EEF1B2P24534 225 aaKnown RBP16.73■□□□□ 0.27
SNX1-208ENST00000559844 PPP2R1BP30154 601 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 BUD31P41223 144 aaPredicted RBP16.73■□□□□ 0.27
SNX1-208ENST00000559844 XCR1P46094 333 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 OR1E2P47887 323 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 PPM1FP49593 454 aaPredicted RBP16.73■□□□□ 0.27
SNX1-208ENST00000559844 GNA13Q14344 377 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 MEP1AQ16819 746 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 PERM1Q5SV97 790 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 C18orf63Q68DL7 685 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 SZRD1Q7Z422 152 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 SAMD14Q8IZD0 417 aaPredicted RBP16.73■□□□□ 0.27
SNX1-208ENST00000559844 KCT2Q8NC54 265 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 OR4C15Q8NGM1 316 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 IFI44Q8TCB0 444 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 FBLIM1Q8WUP2 373 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 RAB8BQ92930 207 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 CNRIP1Q96F85 164 aaPredicted RBP16.73■□□□□ 0.27
SNX1-208ENST00000559844 MAPKAP1Q9BPZ7 522 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 ZFYVE21Q9BQ24 234 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 RSL24D1Q9UHA3 163 aaKnown RBP16.73■□□□□ 0.27
SNX1-208ENST00000559844 PILRAQ9UKJ1 303 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 GMPPBQ9Y5P6 360 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 CEP250Q9BV73 2442 aa16.72■□□□□ 0.27
SNX1-208ENST00000559844 A0A0J9YVX5 310 aa16.72■□□□□ 0.27
SNX1-208ENST00000559844 H3BSA7 217 aa16.72■□□□□ 0.27
SNX1-208ENST00000559844 SLC28A2O43868 658 aa16.72■□□□□ 0.27
SNX1-208ENST00000559844 SERPINB7O75635 380 aa16.72■□□□□ 0.27
SNX1-208ENST00000559844 SMIM10L1P0DMW3 83 aa16.72■□□□□ 0.27
SNX1-208ENST00000559844 RHCEP18577 417 aa16.72■□□□□ 0.27
SNX1-208ENST00000559844 YAP1P46937 504 aaKnown RBP16.72■□□□□ 0.27
SNX1-208ENST00000559844 OR1D5P58170 312 aa16.72■□□□□ 0.27
SNX1-208ENST00000559844 ABHD13Q7L211 337 aa16.72■□□□□ 0.27
SNX1-208ENST00000559844 PIP4P1Q86T03 277 aa16.72■□□□□ 0.27
SNX1-208ENST00000559844 ZNF655Q8N720 491 aaPredicted RBP16.72■□□□□ 0.27
SNX1-208ENST00000559844 SMYD1Q8NB12 490 aa16.72■□□□□ 0.27
SNX1-208ENST00000559844 SUN3Q8TAQ9 357 aa16.72■□□□□ 0.27
SNX1-208ENST00000559844 RSC1A1Q92681 617 aa16.72■□□□□ 0.27
SNX1-208ENST00000559844 PROX1Q92786 737 aa16.72■□□□□ 0.27
SNX1-208ENST00000559844 TMIGD2Q96BF3 282 aa16.72■□□□□ 0.27
SNX1-208ENST00000559844 NMD3Q96D46 503 aaKnown RBP16.72■□□□□ 0.27
SNX1-208ENST00000559844 SMIM10Q96HG1 83 aa16.72■□□□□ 0.27
SNX1-208ENST00000559844 CDC6Q99741 560 aa16.72■□□□□ 0.27
SNX1-208ENST00000559844 TUBA1CQ9BQE3 449 aa16.72■□□□□ 0.27
SNX1-208ENST00000559844 PRDM9Q9NQV7 894 aa16.72■□□□□ 0.27
SNX1-208ENST00000559844 PAPOLBQ9NRJ5 636 aaKnown RBP16.72■□□□□ 0.27
SNX1-208ENST00000559844 SH3GLB1Q9Y371 365 aa16.72■□□□□ 0.27
SNX1-208ENST00000559844 A0A0J9YY10 115 aa16.71■□□□□ 0.27
SNX1-208ENST00000559844 ABCB7O75027 752 aa16.71■□□□□ 0.27
SNX1-208ENST00000559844 UBXN7O94888 489 aa16.71■□□□□ 0.27
SNX1-208ENST00000559844 MFN2O95140 757 aa16.71■□□□□ 0.27
SNX1-208ENST00000559844 FHP07954 510 aa16.71■□□□□ 0.27
SNX1-208ENST00000559844 PNLIPP16233 465 aa16.71■□□□□ 0.27
SNX1-208ENST00000559844 IL7RP16871 459 aa16.71■□□□□ 0.27
SNX1-208ENST00000559844 TYRP1P17643 537 aa16.71■□□□□ 0.27
SNX1-208ENST00000559844 CD247P20963 164 aa16.71■□□□□ 0.27
SNX1-208ENST00000559844 POLR2IP36954 125 aaKnown RBP16.71■□□□□ 0.27
SNX1-208ENST00000559844 GPR3P46089 330 aa16.71■□□□□ 0.27
SNX1-208ENST00000559844 CLK3P49761 638 aaKnown RBP16.71■□□□□ 0.27
SNX1-208ENST00000559844 EPHA4P54764 986 aa16.71■□□□□ 0.27
SNX1-208ENST00000559844 CDH12P55289 794 aa16.71■□□□□ 0.27
SNX1-208ENST00000559844 PRR5P85299 388 aa16.71■□□□□ 0.27
SNX1-208ENST00000559844 IL5RAQ01344 420 aa16.71■□□□□ 0.27
SNX1-208ENST00000559844 TNFRSF17Q02223 184 aa16.71■□□□□ 0.27
SNX1-208ENST00000559844 RAPSNQ13702 412 aa16.71■□□□□ 0.27
SNX1-208ENST00000559844 NR1D2Q14995 579 aa16.71■□□□□ 0.27
SNX1-208ENST00000559844 CTU2Q2VPK5 515 aaKnown RBP16.71■□□□□ 0.27
SNX1-208ENST00000559844 RPS26P11Q5JNZ5 115 aaPredicted RBP16.71■□□□□ 0.27
SNX1-208ENST00000559844 KCTD8Q6ZWB6 473 aa16.71■□□□□ 0.27
SNX1-208ENST00000559844 KRT73Q86Y46 540 aa16.71■□□□□ 0.27
SNX1-208ENST00000559844 SLC44A2Q8IWA5 706 aaPredicted RBP16.71■□□□□ 0.27
SNX1-208ENST00000559844 CCDC116Q8IYX3 515 aa16.71■□□□□ 0.27
SNX1-208ENST00000559844 GALNT15Q8N3T1 639 aa16.71■□□□□ 0.27
SNX1-208ENST00000559844 OR10G2Q8NGC3 310 aa16.71■□□□□ 0.27
SNX1-208ENST00000559844 BBS10Q8TAM1 723 aa16.71■□□□□ 0.27
SNX1-208ENST00000559844 ZNF566Q969W8 418 aa16.71■□□□□ 0.27
SNX1-208ENST00000559844 RERGQ96A58 199 aaPredicted RBP16.71■□□□□ 0.27
SNX1-208ENST00000559844 FCRL4Q96PJ5 515 aa16.71■□□□□ 0.27
SNX1-208ENST00000559844 CCDC3Q9BQI4 270 aa16.71■□□□□ 0.27
SNX1-208ENST00000559844 GABARAPL3Q9BY60 117 aa16.71■□□□□ 0.27
SNX1-208ENST00000559844 SERHL2Q9H4I8 314 aa16.71■□□□□ 0.27
SNX1-208ENST00000559844 C3orf14Q9HBI5 128 aa16.71■□□□□ 0.27
SNX1-208ENST00000559844 TRPC4Q9UBN4 977 aa16.71■□□□□ 0.27
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