RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 MRPS30Q9NP92 439 aaKnown RBP9.47□□□□□ -0.89
LRRC28-216ENST00000559819 ANKMY1Q9P2S6 941 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 NDOR1Q9UHB4 597 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 GPR55Q9Y2T6 319 aaPredicted RBP9.47□□□□□ -0.89
LRRC28-216ENST00000559819 UNC80Q8N2C7 3258 aa9.46□□□□□ -0.89
LRRC28-216ENST00000559819 MED26O95402 600 aa9.46□□□□□ -0.89
LRRC28-216ENST00000559819 PTNP21246 168 aa9.46□□□□□ -0.89
LRRC28-216ENST00000559819 PPP2R1BP30154 601 aa9.46□□□□□ -0.89
LRRC28-216ENST00000559819 MAT2AP31153 395 aaKnown RBP9.46□□□□□ -0.89
LRRC28-216ENST00000559819 CRYBB2P43320 205 aa9.46□□□□□ -0.89
LRRC28-216ENST00000559819 GSTM5P46439 218 aa9.46□□□□□ -0.89
LRRC28-216ENST00000559819 KHKP50053 298 aa9.46□□□□□ -0.89
LRRC28-216ENST00000559819 HOXC5Q00444 222 aa9.46□□□□□ -0.89
LRRC28-216ENST00000559819 MXD1Q05195 221 aa9.46□□□□□ -0.89
LRRC28-216ENST00000559819 SFSWAPQ12872 951 aaKnown RBP9.46□□□□□ -0.89
LRRC28-216ENST00000559819 SELENBP1Q13228 472 aa9.46□□□□□ -0.89
LRRC28-216ENST00000559819 LTB4RQ15722 352 aa9.46□□□□□ -0.89
LRRC28-216ENST00000559819 ZIC1Q15915 447 aa9.46□□□□□ -0.89
LRRC28-216ENST00000559819 LIPKQ5VXJ0 399 aa9.46□□□□□ -0.89
LRRC28-216ENST00000559819 GDPD3Q7L5L3 318 aa9.46□□□□□ -0.89
LRRC28-216ENST00000559819 VRK2Q86Y07 508 aa9.46□□□□□ -0.89
LRRC28-216ENST00000559819 CELF2-AS1Q8N7Q2 184 aa9.46□□□□□ -0.89
LRRC28-216ENST00000559819 ACOT4Q8N9L9 421 aa9.46□□□□□ -0.89
LRRC28-216ENST00000559819 MORN4Q8NDC4 146 aa9.46□□□□□ -0.89
LRRC28-216ENST00000559819 OR52I1Q8NGK6 324 aa9.46□□□□□ -0.89
LRRC28-216ENST00000559819 OR8J1Q8NGP2 316 aa9.46□□□□□ -0.89
LRRC28-216ENST00000559819 FCRL4Q96PJ5 515 aa9.46□□□□□ -0.89
LRRC28-216ENST00000559819 POLR2J2Q9GZM3 115 aaKnown RBP9.46□□□□□ -0.89
LRRC28-216ENST00000559819 SMURF1Q9HCE7 757 aa9.46□□□□□ -0.89
LRRC28-216ENST00000559819 SNTG1Q9NSN8 517 aa9.46□□□□□ -0.89
LRRC28-216ENST00000559819 EHD3Q9NZN3 535 aa9.46□□□□□ -0.89
LRRC28-216ENST00000559819 APOBEC3BQ9UH17 382 aaKnown RBP9.46□□□□□ -0.89
LRRC28-216ENST00000559819 ACSL5Q9ULC5 683 aa9.46□□□□□ -0.89
LRRC28-216ENST00000559819 NTNG1Q9Y2I2 539 aa9.46□□□□□ -0.89
LRRC28-216ENST00000559819 GPR52Q9Y2T5 361 aa9.46□□□□□ -0.89
LRRC28-216ENST00000559819 RPL36Q9Y3U8 105 aaKnown RBP9.46□□□□□ -0.89
LRRC28-216ENST00000559819 ASB4Q9Y574 426 aa9.46□□□□□ -0.89
LRRC28-216ENST00000559819 DNMT3AQ9Y6K1 912 aaPredicted RBP9.46□□□□□ -0.89
LRRC28-216ENST00000559819 HEATR5BQ9P2D3 2071 aa9.46□□□□□ -0.9
LRRC28-216ENST00000559819 DRD2P14416 443 aa9.46□□□□□ -0.9
LRRC28-216ENST00000559819 HIST1H1TP22492 207 aaPredicted RBP9.46□□□□□ -0.9
LRRC28-216ENST00000559819 ETV5P41161 510 aa9.46□□□□□ -0.9
LRRC28-216ENST00000559819 PCYT1AP49585 367 aa9.46□□□□□ -0.9
LRRC28-216ENST00000559819 ETV1P50549 477 aa9.46□□□□□ -0.9
LRRC28-216ENST00000559819 MLLT1Q03111 559 aaPredicted RBP9.46□□□□□ -0.9
LRRC28-216ENST00000559819 RUNX3Q13761 415 aa9.46□□□□□ -0.9
LRRC28-216ENST00000559819 SLC9A5Q14940 896 aa9.46□□□□□ -0.9
LRRC28-216ENST00000559819 MLC1Q15049 377 aa9.46□□□□□ -0.9
LRRC28-216ENST00000559819 NCF4Q15080 339 aa9.46□□□□□ -0.9
LRRC28-216ENST00000559819 TIMM50Q3ZCQ8 353 aa9.46□□□□□ -0.9
LRRC28-216ENST00000559819 FLYWCH1Q4VC44 716 aa9.46□□□□□ -0.9
LRRC28-216ENST00000559819 ZMAT1Q5H9K5 638 aa9.46□□□□□ -0.9
LRRC28-216ENST00000559819 MEDAGQ5VYS4 303 aa9.46□□□□□ -0.9
LRRC28-216ENST00000559819 ABHD17CQ6PCB6 329 aa9.46□□□□□ -0.9
LRRC28-216ENST00000559819 SHFQ7M4L6 423 aa9.46□□□□□ -0.9
LRRC28-216ENST00000559819 KRT73Q86Y46 540 aa9.46□□□□□ -0.9
LRRC28-216ENST00000559819 RAB42Q8N4Z0 105 aa9.46□□□□□ -0.9
LRRC28-216ENST00000559819 NANOGP1Q8N7R0 232 aa9.46□□□□□ -0.9
LRRC28-216ENST00000559819 GPR151Q8TDV0 419 aa9.46□□□□□ -0.9
LRRC28-216ENST00000559819 GANCQ8TET4 914 aa9.46□□□□□ -0.9
LRRC28-216ENST00000559819 RASSF5Q8WWW0 418 aa9.46□□□□□ -0.9
LRRC28-216ENST00000559819 LRR1Q96L50 414 aa9.46□□□□□ -0.9
LRRC28-216ENST00000559819 CEP19Q96LK0 163 aa9.46□□□□□ -0.9
LRRC28-216ENST00000559819 FAIM2Q9BWQ8 316 aa9.46□□□□□ -0.9
LRRC28-216ENST00000559819 C6orf106Q9H6K1 298 aaPredicted RBP9.46□□□□□ -0.9
LRRC28-216ENST00000559819 CPNE5Q9HCH3 593 aa9.46□□□□□ -0.9
LRRC28-216ENST00000559819 POLMQ9NP87 494 aaPredicted RBP9.46□□□□□ -0.9
LRRC28-216ENST00000559819 PRDM7Q9NQW5 492 aa9.46□□□□□ -0.9
LRRC28-216ENST00000559819 TAS2R7Q9NYW3 318 aa9.46□□□□□ -0.9
LRRC28-216ENST00000559819 CFL2Q9Y281 166 aa9.46□□□□□ -0.9
LRRC28-216ENST00000559819 YARS2Q9Y2Z4 477 aaKnown RBP9.46□□□□□ -0.9
LRRC28-216ENST00000559819 DENND4AQ7Z401 1863 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 A0A1W2PRQ8 180 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 SMIM30A4D0T7 59 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 C5orf67F2Z3F1 127 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 RGS5O15539 181 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 SLITRK5O94991 958 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 LGI1O95970 557 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 CEACAM5P06731 702 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 CA3P07451 260 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 CLEC2LP0C7M8 214 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 DDX5P17844 614 aaKnown RBP9.45□□□□□ -0.9
LRRC28-216ENST00000559819 ATP5A1P25705 553 aaKnown RBP9.45□□□□□ -0.9
LRRC28-216ENST00000559819 TNFSF8P32971 234 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 MC3RP41968 323 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 MAGEA10P43363 369 aaPredicted RBP9.45□□□□□ -0.9
LRRC28-216ENST00000559819 MAN2A2P49641 1150 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 TMED10P49755 219 aaKnown RBP9.45□□□□□ -0.9
LRRC28-216ENST00000559819 TRA2BP62995 288 aaKnown RBP9.45□□□□□ -0.9
LRRC28-216ENST00000559819 CHRNEQ04844 493 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 GPM6BQ13491 265 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 SYT14P1Q58G82 188 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 SPANXN2Q5MJ10 180 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 PRICKLE2Q7Z3G6 844 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 OR9A2Q8NGT5 310 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 OR2L8Q8NGY9 312 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 BBS10Q8TAM1 723 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 KAT2AQ92830 837 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 TMEM203Q969S6 136 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 ZNF764Q96H86 408 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms