RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 RGNQ15493 299 aa16.86■□□□□ 0.29
CLPX-203ENST00000558958 SAMD4BQ5PRF9 694 aaKnown RBP16.86■□□□□ 0.29
CLPX-203ENST00000558958 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.86■□□□□ 0.29
CLPX-203ENST00000558958 ANGPTL8Q6UXH0 198 aa16.86■□□□□ 0.29
CLPX-203ENST00000558958 SZRD1Q7Z422 152 aa16.86■□□□□ 0.29
CLPX-203ENST00000558958 CPEB2Q7Z5Q1 589 aaKnown RBP16.86■□□□□ 0.29
CLPX-203ENST00000558958 RNF130Q86XS8 419 aa16.86■□□□□ 0.29
CLPX-203ENST00000558958 C10orf111Q8N326 155 aa16.86■□□□□ 0.29
CLPX-203ENST00000558958 OR52N2Q8NGI0 321 aa16.86■□□□□ 0.29
CLPX-203ENST00000558958 GIMAP5Q96F15 307 aa16.86■□□□□ 0.29
CLPX-203ENST00000558958 SENP5Q96HI0 755 aaPredicted RBP16.86■□□□□ 0.29
CLPX-203ENST00000558958 MMADHCQ9H3L0 296 aaPredicted RBP16.86■□□□□ 0.29
CLPX-203ENST00000558958 C19orf25Q9UFG5 118 aaPredicted RBP16.86■□□□□ 0.29
CLPX-203ENST00000558958 CD300AQ9UGN4 299 aa16.86■□□□□ 0.29
CLPX-203ENST00000558958 PACSIN3Q9UKS6 424 aa16.86■□□□□ 0.29
CLPX-203ENST00000558958 ERVK-19Q9WJR5 959 aa16.86■□□□□ 0.29
CLPX-203ENST00000558958 PCDHGA6Q9Y5G7 932 aa16.86■□□□□ 0.29
CLPX-203ENST00000558958 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.86■□□□□ 0.29
CLPX-203ENST00000558958 LOC102723996A0A087X1L8 192 aa16.85■□□□□ 0.29
CLPX-203ENST00000558958 IGHV3-20A0A0C4DH32 117 aa16.85■□□□□ 0.29
CLPX-203ENST00000558958 DDAH2O95865 285 aa16.85■□□□□ 0.29
CLPX-203ENST00000558958 HMGN2P05204 90 aaKnown RBP16.85■□□□□ 0.29
CLPX-203ENST00000558958 LIPCP11150 499 aa16.85■□□□□ 0.29
CLPX-203ENST00000558958 SPINK2P20155 84 aa16.85■□□□□ 0.29
CLPX-203ENST00000558958 MMP11P24347 488 aa16.85■□□□□ 0.29
CLPX-203ENST00000558958 SSTR4P31391 388 aa16.85■□□□□ 0.29
CLPX-203ENST00000558958 EEFSECP57772 596 aaKnown RBP16.85■□□□□ 0.29
CLPX-203ENST00000558958 KCNJ2P63252 427 aa16.85■□□□□ 0.29
CLPX-203ENST00000558958 DUSP8Q13202 625 aa16.85■□□□□ 0.29
CLPX-203ENST00000558958 CEACAM7Q14002 265 aa16.85■□□□□ 0.29
CLPX-203ENST00000558958 SPATS1Q496A3 300 aa16.85■□□□□ 0.29
CLPX-203ENST00000558958 PIGGQ5H8A4 983 aa16.85■□□□□ 0.29
CLPX-203ENST00000558958 COX20Q5RI15 118 aa16.85■□□□□ 0.29
CLPX-203ENST00000558958 PGM2L1Q6PCE3 622 aa16.85■□□□□ 0.29
CLPX-203ENST00000558958 IL22RA1Q8N6P7 574 aa16.85■□□□□ 0.29
CLPX-203ENST00000558958 C8orf44Q96CB5 159 aa16.85■□□□□ 0.29
CLPX-203ENST00000558958 FBXL20Q96IG2 436 aa16.85■□□□□ 0.29
CLPX-203ENST00000558958 CLPTM1LQ96KA5 538 aa16.85■□□□□ 0.29
CLPX-203ENST00000558958 MS4A4EQ96PG1 132 aa16.85■□□□□ 0.29
CLPX-203ENST00000558958 ECSITQ9BQ95 431 aa16.85■□□□□ 0.29
CLPX-203ENST00000558958 WDR77Q9BQA1 342 aaPredicted RBP16.85■□□□□ 0.29
CLPX-203ENST00000558958 CNPPD1Q9BV87 410 aa16.85■□□□□ 0.29
CLPX-203ENST00000558958 RAD21L1Q9H4I0 556 aa16.85■□□□□ 0.29
CLPX-203ENST00000558958 HS3ST3B1Q9Y662 390 aa16.85■□□□□ 0.29
CLPX-203ENST00000558958 PRORSD1PA6NEY8 169 aa16.84■□□□□ 0.29
CLPX-203ENST00000558958 BCAS2O75934 225 aaPredicted RBP16.84■□□□□ 0.29
CLPX-203ENST00000558958 CLPSP04118 112 aa16.84■□□□□ 0.29
CLPX-203ENST00000558958 IGKV3-11P04433 115 aa16.84■□□□□ 0.29
CLPX-203ENST00000558958 MAGEA8P43361 318 aa16.84■□□□□ 0.29
CLPX-203ENST00000558958 ID4P47928 161 aa16.84■□□□□ 0.29
CLPX-203ENST00000558958 GZMMP51124 257 aa16.84■□□□□ 0.29
CLPX-203ENST00000558958 CASP9P55211 416 aa16.84■□□□□ 0.29
CLPX-203ENST00000558958 RPS26P62854 115 aaKnown RBP16.84■□□□□ 0.29
CLPX-203ENST00000558958 LIPEQ05469 1076 aa16.84■□□□□ 0.29
CLPX-203ENST00000558958 FADDQ13158 208 aa16.84■□□□□ 0.29
CLPX-203ENST00000558958 SSPNQ14714 243 aa16.84■□□□□ 0.29
CLPX-203ENST00000558958 CALHM3Q86XJ0 350 aa16.84■□□□□ 0.29
CLPX-203ENST00000558958 ULK2Q8IYT8 1036 aa16.84■□□□□ 0.29
CLPX-203ENST00000558958 FBXW8Q8N3Y1 598 aa16.84■□□□□ 0.29
CLPX-203ENST00000558958 RNF148Q8N7C7 305 aa16.84■□□□□ 0.29
CLPX-203ENST00000558958 MORN4Q8NDC4 146 aa16.84■□□□□ 0.29
CLPX-203ENST00000558958 OR7G1Q8NGA0 311 aa16.84■□□□□ 0.29
CLPX-203ENST00000558958 OR52R1Q8NGF1 315 aa16.84■□□□□ 0.29
CLPX-203ENST00000558958 OR10A6Q8NH74 314 aa16.84■□□□□ 0.29
CLPX-203ENST00000558958 MIPOL1Q8TD10 442 aa16.84■□□□□ 0.29
CLPX-203ENST00000558958 SLC2A12Q8TD20 617 aa16.84■□□□□ 0.29
CLPX-203ENST00000558958 ZNF721Q8TF20 911 aa16.84■□□□□ 0.29
CLPX-203ENST00000558958 UTP4Q969X6 686 aaKnown RBP16.84■□□□□ 0.29
CLPX-203ENST00000558958 SLC35G5Q96KT7 338 aa16.84■□□□□ 0.29
CLPX-203ENST00000558958 ART5Q96L15 291 aa16.84■□□□□ 0.29
CLPX-203ENST00000558958 ZNF583Q96ND8 569 aa16.84■□□□□ 0.29
CLPX-203ENST00000558958 SERHL2Q9H4I8 314 aa16.84■□□□□ 0.29
CLPX-203ENST00000558958 GMPR2Q9P2T1 348 aaKnown RBP16.84■□□□□ 0.29
CLPX-203ENST00000558958 KCND3Q9UK17 655 aa16.84■□□□□ 0.29
CLPX-203ENST00000558958 SAGE2PA6NJ88 616 aa16.83■□□□□ 0.28
CLPX-203ENST00000558958 ANKRD65E5RJM6 399 aa16.83■□□□□ 0.28
CLPX-203ENST00000558958 DNAJA2O60884 412 aa16.83■□□□□ 0.28
CLPX-203ENST00000558958 COQ9O75208 318 aa16.83■□□□□ 0.28
CLPX-203ENST00000558958 PDE5AO76074 875 aa16.83■□□□□ 0.28
CLPX-203ENST00000558958 HSD17B1P14061 328 aa16.83■□□□□ 0.28
CLPX-203ENST00000558958 CRATP43155 626 aa16.83■□□□□ 0.28
CLPX-203ENST00000558958 GSK3BP49841 420 aa16.83■□□□□ 0.28
CLPX-203ENST00000558958 EMDP50402 254 aa16.83■□□□□ 0.28
CLPX-203ENST00000558958 LASP1Q14847 261 aaKnown RBP16.83■□□□□ 0.28
CLPX-203ENST00000558958 TGIF1Q15583 401 aa16.83■□□□□ 0.28
CLPX-203ENST00000558958 TBC1D25Q3MII6 688 aa16.83■□□□□ 0.28
CLPX-203ENST00000558958 MFSD12Q6NUT3 480 aa16.83■□□□□ 0.28
CLPX-203ENST00000558958 PAPD4Q6PIY7 484 aaKnown RBP16.83■□□□□ 0.28
CLPX-203ENST00000558958 SERPINA11Q86U17 422 aa16.83■□□□□ 0.28
CLPX-203ENST00000558958 HORMAD2Q8N7B1 307 aa16.83■□□□□ 0.28
CLPX-203ENST00000558958 ZNF615Q8N8J6 731 aa16.83■□□□□ 0.28
CLPX-203ENST00000558958 NFAM1Q8NET5 270 aaPredicted RBP16.83■□□□□ 0.28
CLPX-203ENST00000558958 NACC2Q96BF6 587 aa16.83■□□□□ 0.28
CLPX-203ENST00000558958 C16orf58Q96GQ5 468 aa16.83■□□□□ 0.28
CLPX-203ENST00000558958 LPAR4Q99677 370 aa16.83■□□□□ 0.28
CLPX-203ENST00000558958 OR8D2Q9GZM6 311 aa16.83■□□□□ 0.28
CLPX-203ENST00000558958 OR10A5Q9H207 317 aa16.83■□□□□ 0.28
CLPX-203ENST00000558958 ALG2Q9H553 416 aa16.83■□□□□ 0.28
CLPX-203ENST00000558958 PIF1Q9H611 641 aa16.83■□□□□ 0.28
CLPX-203ENST00000558958 EQTNQ9NQ60 294 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms