RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 UCK2Q9BZX2 261 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 NXF5Q9H1B4 397 aaKnown RBP10.95□□□□□ -0.66
HERC1-202ENST00000558324 C12orf65Q9H3J6 166 aaKnown RBP10.95□□□□□ -0.66
HERC1-202ENST00000558324 GSTO2Q9H4Y5 243 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 MID1IP1Q9NPA3 183 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 HEY2Q9UBP5 337 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 B4GALT7Q9UBV7 327 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 DCDC2Q9UHG0 476 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 MCM8Q9UJA3 840 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 UTS2RQ9UKP6 389 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 PSME2Q9UL46 239 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 DLGAP4Q9Y2H0 992 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 STK38LQ9Y2H1 464 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 PLLPQ9Y342 182 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 A0A1B0GVC2 190 aa10.94□□□□□ -0.66
HERC1-202ENST00000558324 G3V2L1 256 aa10.94□□□□□ -0.66
HERC1-202ENST00000558324 UBFD1O14562 309 aaKnown RBP10.94□□□□□ -0.66
HERC1-202ENST00000558324 SUSD5O60279 629 aa10.94□□□□□ -0.66
HERC1-202ENST00000558324 ENO1P06733 434 aaKnown RBP10.94□□□□□ -0.66
HERC1-202ENST00000558324 PCSK2P16519 638 aa10.94□□□□□ -0.66
HERC1-202ENST00000558324 S1PR1P21453 382 aa10.94□□□□□ -0.66
HERC1-202ENST00000558324 ABCD3P28288 659 aa10.94□□□□□ -0.66
HERC1-202ENST00000558324 CHRNB4P30926 498 aa10.94□□□□□ -0.66
HERC1-202ENST00000558324 TIA1P31483 386 aaKnown RBP eCLIP10.94□□□□□ -0.66
HERC1-202ENST00000558324 MASP1P48740 699 aa10.94□□□□□ -0.66
HERC1-202ENST00000558324 FOXA1P55317 472 aa10.94□□□□□ -0.66
HERC1-202ENST00000558324 PKNOX1P55347 436 aa10.94□□□□□ -0.66
HERC1-202ENST00000558324 RAE1P78406 368 aaKnown RBP10.94□□□□□ -0.66
HERC1-202ENST00000558324 MGAT2Q10469 447 aa10.94□□□□□ -0.66
HERC1-202ENST00000558324 DUSP8Q13202 625 aa10.94□□□□□ -0.66
HERC1-202ENST00000558324 TOMM20Q15388 145 aa10.94□□□□□ -0.66
HERC1-202ENST00000558324 TRMT12Q53H54 448 aaKnown RBP10.94□□□□□ -0.66
HERC1-202ENST00000558324 SPDYAQ5MJ70 313 aa10.94□□□□□ -0.66
HERC1-202ENST00000558324 WLSQ5T9L3 541 aa10.94□□□□□ -0.66
HERC1-202ENST00000558324 DESI1Q6ICB0 168 aa10.94□□□□□ -0.66
HERC1-202ENST00000558324 ZYG11AQ6WRX3 759 aa10.94□□□□□ -0.66
HERC1-202ENST00000558324 MEX3BQ6ZN04 569 aaKnown RBP10.94□□□□□ -0.66
HERC1-202ENST00000558324 ACAD11Q709F0 780 aa10.94□□□□□ -0.66
HERC1-202ENST00000558324 GBP7Q8N8V2 638 aaPredicted RBP10.94□□□□□ -0.66
HERC1-202ENST00000558324 CCDC63Q8NA47 563 aa10.94□□□□□ -0.66
HERC1-202ENST00000558324 OR52R1Q8NGF1 315 aa10.94□□□□□ -0.66
HERC1-202ENST00000558324 SPPL2AQ8TCT8 520 aa10.94□□□□□ -0.66
HERC1-202ENST00000558324 ASB5Q8WWX0 329 aa10.94□□□□□ -0.66
HERC1-202ENST00000558324 SARAFQ96BY9 339 aa10.94□□□□□ -0.66
HERC1-202ENST00000558324 RILPQ96NA2 401 aa10.94□□□□□ -0.66
HERC1-202ENST00000558324 SHCBP1LQ9BZQ2 653 aa10.94□□□□□ -0.66
HERC1-202ENST00000558324 ANKRA2Q9H9E1 313 aa10.94□□□□□ -0.66
HERC1-202ENST00000558324 EHD3Q9NZN3 535 aa10.94□□□□□ -0.66
HERC1-202ENST00000558324 FAM215AQ9Y5M1 114 aa10.94□□□□□ -0.66
HERC1-202ENST00000558324 C15orf38-AP3S2A0A0A6YYH1 394 aa10.93□□□□□ -0.66
HERC1-202ENST00000558324 ENO4A6NNW6 628 aa10.93□□□□□ -0.66
HERC1-202ENST00000558324 HCN1O60741 890 aa10.93□□□□□ -0.66
HERC1-202ENST00000558324 TRIM3O75382 744 aaPredicted RBP10.93□□□□□ -0.66
HERC1-202ENST00000558324 NME6O75414 186 aaPredicted RBP10.93□□□□□ -0.66
HERC1-202ENST00000558324 CRCPO75575 148 aa10.93□□□□□ -0.66
HERC1-202ENST00000558324 TRAPPC6AO75865 159 aa10.93□□□□□ -0.66
HERC1-202ENST00000558324 CBX7O95931 251 aa10.93□□□□□ -0.66
HERC1-202ENST00000558324 PROCP04070 461 aa10.93□□□□□ -0.66
HERC1-202ENST00000558324 NAGLUP54802 743 aa10.93□□□□□ -0.66
HERC1-202ENST00000558324 TRA2BP62995 288 aaKnown RBP10.93□□□□□ -0.66
HERC1-202ENST00000558324 PLCXD2Q0VAA5 305 aa10.93□□□□□ -0.66
HERC1-202ENST00000558324 MAP4K2Q12851 820 aa10.93□□□□□ -0.66
HERC1-202ENST00000558324 IMPG1Q17R60 797 aa10.93□□□□□ -0.66
HERC1-202ENST00000558324 SPIN4Q56A73 249 aa10.93□□□□□ -0.66
HERC1-202ENST00000558324 TBCELQ5QJ74 424 aa10.93□□□□□ -0.66
HERC1-202ENST00000558324 C1orf185Q5T7R7 199 aa10.93□□□□□ -0.66
HERC1-202ENST00000558324 TMEM198Q66K66 360 aa10.93□□□□□ -0.66
HERC1-202ENST00000558324 RTL6Q6ICC9 239 aa10.93□□□□□ -0.66
HERC1-202ENST00000558324 B3GNT6Q6ZMB0 384 aa10.93□□□□□ -0.66
HERC1-202ENST00000558324 CCDC116Q8IYX3 515 aa10.93□□□□□ -0.66
HERC1-202ENST00000558324 ZNF295-AS1Q8N0V1 137 aa10.93□□□□□ -0.66
HERC1-202ENST00000558324 C4orf33Q8N1A6 199 aa10.93□□□□□ -0.66
HERC1-202ENST00000558324 OR9A2Q8NGT5 310 aa10.93□□□□□ -0.66
HERC1-202ENST00000558324 C16orf78Q8WTQ4 265 aa10.93□□□□□ -0.66
HERC1-202ENST00000558324 KAT2AQ92830 837 aa10.93□□□□□ -0.66
HERC1-202ENST00000558324 OMA1Q96E52 524 aa10.93□□□□□ -0.66
HERC1-202ENST00000558324 ZNF681Q96N22 645 aa10.93□□□□□ -0.66
HERC1-202ENST00000558324 TTYH2Q9BSA4 534 aa10.93□□□□□ -0.66
HERC1-202ENST00000558324 METTL7AQ9H8H3 244 aa10.93□□□□□ -0.66
HERC1-202ENST00000558324 CFL2Q9Y281 166 aa10.93□□□□□ -0.66
HERC1-202ENST00000558324 EML6Q6ZMW3 1958 aa10.93□□□□□ -0.66
HERC1-202ENST00000558324 CENPEQ02224 2701 aa10.93□□□□□ -0.66
HERC1-202ENST00000558324 CCDC151A5D8V7 595 aa10.92□□□□□ -0.66
HERC1-202ENST00000558324 ANKRD33BA6NCL7 494 aa10.92□□□□□ -0.66
HERC1-202ENST00000558324 COPEO14579 308 aa10.92□□□□□ -0.66
HERC1-202ENST00000558324 GNB5O14775 395 aa10.92□□□□□ -0.66
HERC1-202ENST00000558324 PLIN3O60664 434 aa10.92□□□□□ -0.66
HERC1-202ENST00000558324 WDR1O75083 606 aa10.92□□□□□ -0.66
HERC1-202ENST00000558324 PPM1BO75688 479 aa10.92□□□□□ -0.66
HERC1-202ENST00000558324 ABCB1P08183 1280 aaPredicted RBP10.92□□□□□ -0.66
HERC1-202ENST00000558324 ANXA4P09525 319 aaPredicted RBP10.92□□□□□ -0.66
HERC1-202ENST00000558324 GLI4P10075 376 aa10.92□□□□□ -0.66
HERC1-202ENST00000558324 SOX18P35713 384 aa10.92□□□□□ -0.66
HERC1-202ENST00000558324 CCT5P48643 541 aa10.92□□□□□ -0.66
HERC1-202ENST00000558324 RPP38P78345 283 aaKnown RBP10.92□□□□□ -0.66
HERC1-202ENST00000558324 GTF3C1Q12789 2109 aa10.92□□□□□ -0.66
HERC1-202ENST00000558324 ZNF628Q5EBL2 1059 aa10.92□□□□□ -0.66
HERC1-202ENST00000558324 CFAP157Q5JU67 520 aa10.92□□□□□ -0.66
HERC1-202ENST00000558324 PACS2Q86VP3 889 aa10.92□□□□□ -0.66
HERC1-202ENST00000558324 C17orf47Q8NEP4 570 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms