RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 FAM180BQ6P0A1 224 aa8.08□□□□□ -1.12
SNRPA1-206ENST00000558059 ARHGAP11AQ6P4F7 1023 aa8.08□□□□□ -1.12
SNRPA1-206ENST00000558059 XKRXQ6PP77 449 aa8.08□□□□□ -1.12
SNRPA1-206ENST00000558059 RPTNQ6XPR3 784 aa8.08□□□□□ -1.12
SNRPA1-206ENST00000558059 C3P1Q6ZMU1 363 aa8.08□□□□□ -1.12
SNRPA1-206ENST00000558059 GK5Q6ZS86 529 aa8.08□□□□□ -1.12
SNRPA1-206ENST00000558059 FAM47EQ6ZV65 393 aa8.08□□□□□ -1.12
SNRPA1-206ENST00000558059 TRIM46Q7Z4K8 759 aa8.08□□□□□ -1.12
SNRPA1-206ENST00000558059 SLC22A16Q86VW1 577 aa8.08□□□□□ -1.12
SNRPA1-206ENST00000558059 C10orf107Q8IVU9 208 aa8.08□□□□□ -1.12
SNRPA1-206ENST00000558059 DND1Q8IYX4 353 aaKnown RBP8.08□□□□□ -1.12
SNRPA1-206ENST00000558059 TAGAPQ8N103 731 aa8.08□□□□□ -1.12
SNRPA1-206ENST00000558059 FBXW8Q8N3Y1 598 aa8.08□□□□□ -1.12
SNRPA1-206ENST00000558059 SIMC1Q8NDZ2 872 aa8.08□□□□□ -1.12
SNRPA1-206ENST00000558059 ADCY4Q8NFM4 1077 aa8.08□□□□□ -1.12
SNRPA1-206ENST00000558059 AENQ8WTP8 325 aaKnown RBP8.08□□□□□ -1.12
SNRPA1-206ENST00000558059 C16orf78Q8WTQ4 265 aa8.08□□□□□ -1.12
SNRPA1-206ENST00000558059 CTHRC1Q96CG8 243 aa8.08□□□□□ -1.12
SNRPA1-206ENST00000558059 KLHL29Q96CT2 875 aa8.08□□□□□ -1.12
SNRPA1-206ENST00000558059 FAIM2Q9BWQ8 316 aa8.08□□□□□ -1.12
SNRPA1-206ENST00000558059 GMPR2Q9P2T1 348 aaKnown RBP8.08□□□□□ -1.12
SNRPA1-206ENST00000558059 LGALS13Q9UHV8 139 aa8.08□□□□□ -1.12
SNRPA1-206ENST00000558059 CNOT11Q9UKZ1 510 aaKnown RBP8.08□□□□□ -1.12
SNRPA1-206ENST00000558059 PSME2Q9UL46 239 aa8.08□□□□□ -1.12
SNRPA1-206ENST00000558059 DTX4Q9Y2E6 619 aa8.08□□□□□ -1.12
SNRPA1-206ENST00000558059 KLF2Q9Y5W3 355 aaPredicted RBP8.08□□□□□ -1.12
SNRPA1-206ENST00000558059 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.08□□□□□ -1.12
SNRPA1-206ENST00000558059 FBN2P35556 2912 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 HCFC1P51610 2035 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 A0A1B0GVC2 190 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 GNG14A0A1W2PPG7 69 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 PRSS44E7EML9 344 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 E9PLN8 166 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 H3BQF6 201 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 ACOT7O00154 380 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 WIPF1O43516 503 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 ZNF500O60304 480 aaPredicted RBP8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 LRATO95237 230 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 SLU7O95391 586 aaKnown RBP8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 CBX7O95931 251 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 IGHG3P01860 377 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 TPOP07202 933 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 CELA3AP09093 270 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 RFPL3SP0C7P2 107 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 AGAP20933 346 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 GPX3P22352 226 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 GRNP28799 593 aaKnown RBP8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 MAGEA5P43359 124 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 FBXW4P57775 412 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 PCLAFQ15004 111 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 LTB4RQ15722 352 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 PRSS53Q2L4Q9 553 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 TRMT12Q53H54 448 aaKnown RBP8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 ZNF628Q5EBL2 1059 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 CFAP157Q5JU67 520 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 PRAMEF20Q5VT98 475 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 LIPMQ5VYY2 423 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 HLA-DQA1Q5Y7H0 255 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 WDR93Q6P2C0 686 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 PAOXQ6QHF9 649 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 TRILQ7L0X0 811 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 TRABD2AQ86V40 505 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 CD163Q86VB7 1156 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 CCDC116Q8IYX3 515 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 VWA5B2Q8N398 1253 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 RIBC1Q8N443 379 aaPredicted RBP8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 FAM109AQ8N4B1 249 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 BANPQ8N9N5 519 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 CCDC63Q8NA47 563 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 FAM13CQ8NE31 585 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 C17orf47Q8NEP4 570 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 OR5M3Q8NGP4 307 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 PHF10Q8WUB8 498 aaKnown RBP8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 EXOSC8Q96B26 276 aaKnown RBP8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 NTNG2Q96CW9 530 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 VKORC1Q9BQB6 163 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 GATA5Q9BWX5 397 aaPredicted RBP8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 EBPLQ9BY08 206 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 SHCBP1LQ9BZQ2 653 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 BRINP2Q9C0B6 783 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 NXF5Q9H1B4 397 aaKnown RBP8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 ZFP64Q9NPA5 681 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 MKS1Q9NXB0 559 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 CNIH4Q9P003 139 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 UTS2RQ9UKP6 389 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 ENTPD4Q9Y227 616 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 PLLPQ9Y342 182 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 CCL27Q9Y4X3 112 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 NPFFR2Q9Y5X5 522 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 LIPGQ9Y5X9 500 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 ZNF780BQ9Y6R6 833 aa8.07□□□□□ -1.12
SNRPA1-206ENST00000558059 ATP6AP2A0A1C7CYW4 349 aa8.06□□□□□ -1.12
SNRPA1-206ENST00000558059 ANKRD33BA6NCL7 494 aa8.06□□□□□ -1.12
SNRPA1-206ENST00000558059 LRRC3CA6NJW4 275 aa8.06□□□□□ -1.12
SNRPA1-206ENST00000558059 CAPN14A8MX76 684 aa8.06□□□□□ -1.12
SNRPA1-206ENST00000558059 TRIM13O60858 407 aa8.06□□□□□ -1.12
SNRPA1-206ENST00000558059 TRIM3O75382 744 aaPredicted RBP8.06□□□□□ -1.12
SNRPA1-206ENST00000558059 ATP6AP2O75787 350 aa8.06□□□□□ -1.12
SNRPA1-206ENST00000558059 ANXA4P09525 319 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms