RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 B3GNTL1Q67FW5 361 aaPredicted RBP19.75■□□□□ 0.75
CASC4-204ENST00000557945 FCRLBQ6BAA4 426 aa19.75■□□□□ 0.75
CASC4-204ENST00000557945 C9orf40Q8IXQ3 194 aa19.75■□□□□ 0.75
CASC4-204ENST00000557945 OR5L2Q8NGL0 311 aa19.75■□□□□ 0.75
CASC4-204ENST00000557945 PSMF1Q92530 271 aa19.75■□□□□ 0.75
CASC4-204ENST00000557945 GAL3ST4Q96RP7 486 aa19.75■□□□□ 0.75
CASC4-204ENST00000557945 CXorf36Q9H7Y0 433 aa19.75■□□□□ 0.75
CASC4-204ENST00000557945 SIRT3Q9NTG7 399 aaPredicted RBP19.75■□□□□ 0.75
CASC4-204ENST00000557945 TAS2R9Q9NYW1 312 aa19.75■□□□□ 0.75
CASC4-204ENST00000557945 CAPN7Q9Y6W3 813 aa19.75■□□□□ 0.75
CASC4-204ENST00000557945 COQ9O75208 318 aa19.74■□□□□ 0.75
CASC4-204ENST00000557945 LRRC74AQ0VAA2 488 aa19.74■□□□□ 0.75
CASC4-204ENST00000557945 AGAP7PQ5VUJ5 663 aa19.74■□□□□ 0.75
CASC4-204ENST00000557945 HLA-DQA1Q5Y7H0 255 aa19.74■□□□□ 0.75
CASC4-204ENST00000557945 OR2L13Q8N349 312 aa19.74■□□□□ 0.75
CASC4-204ENST00000557945 OR8K3Q8NH51 312 aa19.74■□□□□ 0.75
CASC4-204ENST00000557945 C16orf52Q8NHV5 167 aa19.74■□□□□ 0.75
CASC4-204ENST00000557945 ITCHQ96J02 903 aa19.74■□□□□ 0.75
CASC4-204ENST00000557945 CCDC115Q96NT0 180 aa19.74■□□□□ 0.75
CASC4-204ENST00000557945 AGAP4Q96P64 663 aa19.74■□□□□ 0.75
CASC4-204ENST00000557945 PANX1Q96RD7 426 aa19.74■□□□□ 0.75
CASC4-204ENST00000557945 INPP5KQ9BT40 448 aa19.74■□□□□ 0.75
CASC4-204ENST00000557945 SLC25A23Q9BV35 468 aa19.74■□□□□ 0.75
CASC4-204ENST00000557945 CDCP1Q9H5V8 836 aa19.74■□□□□ 0.75
CASC4-204ENST00000557945 LIN28AQ9H9Z2 209 aaKnown RBP19.74■□□□□ 0.75
CASC4-204ENST00000557945 ZCCHC3Q9NUD5 404 aaKnown RBP19.74■□□□□ 0.75
CASC4-204ENST00000557945 PRODH2Q9UF12 536 aa19.74■□□□□ 0.75
CASC4-204ENST00000557945 TEKT2Q9UIF3 430 aa19.74■□□□□ 0.75
CASC4-204ENST00000557945 C19orf53Q9UNZ5 99 aaPredicted RBP19.74■□□□□ 0.75
CASC4-204ENST00000557945 CFL2Q9Y281 166 aa19.74■□□□□ 0.75
CASC4-204ENST00000557945 USP24Q9UPU5 2620 aa19.74■□□□□ 0.75
CASC4-204ENST00000557945 MKRN2OSH3BPM6 223 aa19.73■□□□□ 0.75
CASC4-204ENST00000557945 NDUFAB1O14561 156 aa19.73■□□□□ 0.75
CASC4-204ENST00000557945 RFXANKO14593 260 aa19.73■□□□□ 0.75
CASC4-204ENST00000557945 EMC8O43402 210 aa19.73■□□□□ 0.75
CASC4-204ENST00000557945 NME6O75414 186 aaPredicted RBP19.73■□□□□ 0.75
CASC4-204ENST00000557945 CEACAM4O75871 244 aa19.73■□□□□ 0.75
CASC4-204ENST00000557945 SNRPB2P08579 225 aaKnown RBP19.73■□□□□ 0.75
CASC4-204ENST00000557945 IFI6P09912 130 aa19.73■□□□□ 0.75
CASC4-204ENST00000557945 CAPN3P20807 821 aa19.73■□□□□ 0.75
CASC4-204ENST00000557945 CCT3P49368 545 aaKnown RBP19.73■□□□□ 0.75
CASC4-204ENST00000557945 PRR5P85299 388 aa19.73■□□□□ 0.75
CASC4-204ENST00000557945 RHDQ02161 417 aa19.73■□□□□ 0.75
CASC4-204ENST00000557945 CRB2Q5IJ48 1285 aa19.73■□□□□ 0.75
CASC4-204ENST00000557945 C6orf10Q5SRN2 563 aa19.73■□□□□ 0.75
CASC4-204ENST00000557945 TCTN3Q6NUS6 607 aa19.73■□□□□ 0.75
CASC4-204ENST00000557945 H3F3CQ6NXT2 135 aa19.73■□□□□ 0.75
CASC4-204ENST00000557945 SLC2A7Q6PXP3 512 aa19.73■□□□□ 0.75
CASC4-204ENST00000557945 MSANTD1Q6ZTZ1 278 aa19.73■□□□□ 0.75
CASC4-204ENST00000557945 RPS19BP1Q86WX3 136 aaKnown RBP19.73■□□□□ 0.75
CASC4-204ENST00000557945 NUP43Q8NFH3 380 aa19.73■□□□□ 0.75
CASC4-204ENST00000557945 OR5AK3PQ8NH89 298 aa19.73■□□□□ 0.75
CASC4-204ENST00000557945 PSMA8Q8TAA3 256 aa19.73■□□□□ 0.75
CASC4-204ENST00000557945 BCAS4Q8TDM0 211 aa19.73■□□□□ 0.75
CASC4-204ENST00000557945 EQTNQ9NQ60 294 aa19.73■□□□□ 0.75
CASC4-204ENST00000557945 HEMK1Q9Y5R4 338 aaPredicted RBP19.73■□□□□ 0.75
CASC4-204ENST00000557945 CFAP47Q6ZTR5 3102 aa19.73■□□□□ 0.75
CASC4-204ENST00000557945 C2orf92A0A1B0GVN3 265 aa19.72■□□□□ 0.75
CASC4-204ENST00000557945 DYTNA2CJ06 578 aa19.72■□□□□ 0.75
CASC4-204ENST00000557945 WWP2O00308 870 aa19.72■□□□□ 0.75
CASC4-204ENST00000557945 ADSLP30566 484 aaPredicted RBP19.72■□□□□ 0.75
CASC4-204ENST00000557945 EMDP50402 254 aa19.72■□□□□ 0.75
CASC4-204ENST00000557945 ZNF155Q12901 538 aaPredicted RBP19.72■□□□□ 0.75
CASC4-204ENST00000557945 EBPQ15125 230 aaKnown RBP19.72■□□□□ 0.75
CASC4-204ENST00000557945 LINC00303Q3SY05 128 aa19.72■□□□□ 0.75
CASC4-204ENST00000557945 ABHD17BQ5VST6 288 aa19.72■□□□□ 0.75
CASC4-204ENST00000557945 DNAJC14Q6Y2X3 702 aaPredicted RBP19.72■□□□□ 0.75
CASC4-204ENST00000557945 TMEM64Q6YI46 380 aa19.72■□□□□ 0.75
CASC4-204ENST00000557945 C16orf47Q6ZP98 133 aaPredicted RBP19.72■□□□□ 0.75
CASC4-204ENST00000557945 LINC00696Q6ZRV3 163 aa19.72■□□□□ 0.75
CASC4-204ENST00000557945 CLEC4FQ8N1N0 589 aa19.72■□□□□ 0.75
CASC4-204ENST00000557945 CCDC197Q8NCU1 140 aa19.72■□□□□ 0.75
CASC4-204ENST00000557945 FAM120BQ96EK7 910 aaKnown RBP19.72■□□□□ 0.75
CASC4-204ENST00000557945 ZNF354BQ96LW1 612 aa19.72■□□□□ 0.75
CASC4-204ENST00000557945 WWTR1Q9GZV5 400 aa19.72■□□□□ 0.75
CASC4-204ENST00000557945 ZNF552Q9H707 407 aaPredicted RBP19.72■□□□□ 0.75
CASC4-204ENST00000557945 DOCK10Q96BY6 2186 aa19.72■□□□□ 0.75
CASC4-204ENST00000557945 RNF103-CHMP3A0A140T963 221 aa19.71■□□□□ 0.75
CASC4-204ENST00000557945 A0A1W2PP18 115 aa19.71■□□□□ 0.75
CASC4-204ENST00000557945 ANGPT2O15123 496 aa19.71■□□□□ 0.75
CASC4-204ENST00000557945 SLC22A2O15244 555 aa19.71■□□□□ 0.75
CASC4-204ENST00000557945 MAN1A2O60476 641 aa19.71■□□□□ 0.75
CASC4-204ENST00000557945 ANP32DO95626 131 aa19.71■□□□□ 0.75
CASC4-204ENST00000557945 ALPPP05187 535 aa19.71■□□□□ 0.75
CASC4-204ENST00000557945 GSNP06396 782 aa19.71■□□□□ 0.75
CASC4-204ENST00000557945 FAM87AP0C7U9 286 aa19.71■□□□□ 0.75
CASC4-204ENST00000557945 CDKN2CP42773 168 aa19.71■□□□□ 0.75
CASC4-204ENST00000557945 TP53BP2Q13625 1128 aa19.71■□□□□ 0.75
CASC4-204ENST00000557945 MAPRE2Q15555 327 aa19.71■□□□□ 0.75
CASC4-204ENST00000557945 MEP1AQ16819 746 aa19.71■□□□□ 0.75
CASC4-204ENST00000557945 ACER2Q5QJU3 275 aa19.71■□□□□ 0.75
CASC4-204ENST00000557945 ISLR2Q6UXK2 745 aa19.71■□□□□ 0.75
CASC4-204ENST00000557945 ZNF621Q6ZSS3 439 aa19.71■□□□□ 0.75
CASC4-204ENST00000557945 OR56A1Q8NGH5 318 aa19.71■□□□□ 0.75
CASC4-204ENST00000557945 NUBPLQ8TB37 319 aa19.71■□□□□ 0.75
CASC4-204ENST00000557945 MOAP1Q96BY2 351 aa19.71■□□□□ 0.75
CASC4-204ENST00000557945 MS4A4EQ96PG1 132 aa19.71■□□□□ 0.75
CASC4-204ENST00000557945 ITPAQ9BY32 194 aa19.71■□□□□ 0.75
CASC4-204ENST00000557945 FOLH1BQ9HBA9 442 aa19.71■□□□□ 0.75
CASC4-204ENST00000557945 SLC52A3Q9NQ40 469 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms