RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 COL28A1Q2UY09 1125 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 ZNF750Q32MQ0 723 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 VPS26BQ4G0F5 336 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 FHL5Q5TD97 284 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 ABHD17BQ5VST6 288 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 HLA-DQA1Q5Y7H0 255 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 ANKRD26P1Q6NSI1 321 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 PAOXQ6QHF9 649 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 IGFL2Q6UWQ7 119 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 IGFL3Q6UXB1 125 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 RPS19BP1Q86WX3 136 aaKnown RBP13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 PSMF1Q92530 271 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 TTC9Q92623 222 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 SPDL1Q96EA4 605 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 HSPBAP1Q96EW2 488 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 ITCHQ96J02 903 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 TEX37Q96LM6 180 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 MS4A4EQ96PG1 132 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 MESP1Q9BRJ9 268 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 NUDT9Q9BW91 350 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 FAM107BQ9H098 131 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 EPS8L2Q9H6S3 715 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 SAR1AQ9NR31 198 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 GIN1Q9NXP7 522 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 MYOTQ9UBF9 498 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 YARS2Q9Y2Z4 477 aaKnown RBP13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 CAPN7Q9Y6W3 813 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 COL6A6A6NMZ7 2263 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 TLN1Q9Y490 2541 aaKnown RBP13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 MGAQ8IWI9 3026 aa13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 C2orf92A0A1B0GVN3 265 aa13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 A0A1W2PP18 115 aa13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 A0A1W2PS29 197 aa13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 CCDC154A6NI56 674 aa13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 BBIP1A8MTZ0 92 aa13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 CAPN14A8MX76 684 aa13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 ABCB7O75027 752 aa13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 NPPAP01160 153 aa13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 CT62P0C5K7 136 aa13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 NAGAP17050 411 aa13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 UQCRC2P22695 453 aa13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 MC3RP41968 323 aa13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 PPICP45877 212 aa13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 PRIM2P49643 509 aa13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 TMED10P49755 219 aaKnown RBP13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 ANXA11P50995 505 aaKnown RBP13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 MLF1P58340 268 aa13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 HBA1P69905 142 aa13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 MFAP5Q13361 173 aa13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 EBPQ15125 230 aaKnown RBP13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 ZNHIT3Q15649 155 aaPredicted RBP13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 AGKQ53H12 422 aa13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 FAM111BQ6SJ93 734 aa13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 DGAT2L6Q6ZPD8 337 aa13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 ZNF551Q7Z340 670 aaPredicted RBP13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 FUNDC1Q8IVP5 155 aa13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 TAGAPQ8N103 731 aa13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 ADCY4Q8NFM4 1077 aa13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 OR7G2Q8NG99 324 aa13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 C16orf52Q8NHV5 167 aa13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 SLC22A8Q8TCC7 542 aa13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 BRIX1Q8TDN6 353 aaKnown RBP13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 HOXB13Q92826 284 aaPredicted RBP13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 MARK4Q96L34 752 aa13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 PHF12Q96QT6 1004 aa13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 WWTR1Q9GZV5 400 aa13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 ZNF552Q9H707 407 aaPredicted RBP13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 CCDC167Q9P0B6 97 aa13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 BCAP29Q9UHQ4 241 aa13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 ZNF223Q9UK11 482 aaPredicted RBP13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 HEMK1Q9Y5R4 338 aaPredicted RBP13.1□□□□□ -0.31
SUPT16H-208ENST00000557652 DUXAA6NLW8 204 aa13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 UPK1AO00322 258 aa13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 RFXANKO14593 260 aa13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 TO15178 435 aa13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 ERN1O75460 977 aaKnown RBP13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 DNAJB5O75953 348 aa13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 C6orf47O95873 294 aa13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 CLPSP04118 112 aa13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 SNRPB2P08579 225 aaKnown RBP13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 DRD5P21918 477 aa13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 PPIBP23284 216 aaKnown RBP13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 SSTR4P31391 388 aa13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 TRHRP34981 398 aaPredicted RBP13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 SOX18P35713 384 aa13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 CASRP41180 1078 aa13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 ZFP36L2P47974 494 aaKnown RBP13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 CCT3P49368 545 aaKnown RBP13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 EMDP50402 254 aa13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 NME5P56597 212 aa13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 NRG3P56975 720 aa13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 PHC1P78364 1004 aa13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 MRPS35P82673 323 aaKnown RBP13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 KCNAB2Q13303 367 aa13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 LTB4RQ15722 352 aa13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 TRMT12Q53H54 448 aaKnown RBP13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 ACER2Q5QJU3 275 aa13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 FAM180BQ6P0A1 224 aa13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 TMEM107Q6UX40 140 aa13.09□□□□□ -0.31
SUPT16H-208ENST00000557652 C9orf40Q8IXQ3 194 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms