RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.55□□□□□ -0.56
SLIRP-211ENST00000557623 ZGRF1Q86YA3 2104 aa11.55□□□□□ -0.56
SLIRP-211ENST00000557623 FAM9CQ8IZT9 166 aa11.55□□□□□ -0.56
SLIRP-211ENST00000557623 GOLGA6L1Q8N7Z2 621 aa11.55□□□□□ -0.56
SLIRP-211ENST00000557623 ZNF781Q8N8C0 355 aa11.55□□□□□ -0.56
SLIRP-211ENST00000557623 PSD4Q8NDX1 1056 aa11.55□□□□□ -0.56
SLIRP-211ENST00000557623 C17orf47Q8NEP4 570 aa11.55□□□□□ -0.56
SLIRP-211ENST00000557623 ADCY4Q8NFM4 1077 aa11.55□□□□□ -0.56
SLIRP-211ENST00000557623 RAB3IL1Q8TBN0 382 aa11.55□□□□□ -0.56
SLIRP-211ENST00000557623 CTHRC1Q96CG8 243 aa11.55□□□□□ -0.56
SLIRP-211ENST00000557623 ZNF764Q96H86 408 aaPredicted RBP11.55□□□□□ -0.56
SLIRP-211ENST00000557623 VIPAS39Q9H9C1 493 aa11.55□□□□□ -0.56
SLIRP-211ENST00000557623 BCAP29Q9UHQ4 241 aa11.55□□□□□ -0.56
SLIRP-211ENST00000557623 ZNF639Q9UID6 485 aa11.55□□□□□ -0.56
SLIRP-211ENST00000557623 MYO1GB0I1T2 1018 aa11.54□□□□□ -0.56
SLIRP-211ENST00000557623 PEX1O43933 1283 aa11.54□□□□□ -0.56
SLIRP-211ENST00000557623 PEX11AO75192 247 aa11.54□□□□□ -0.56
SLIRP-211ENST00000557623 NADKO95544 446 aaPredicted RBP11.54□□□□□ -0.56
SLIRP-211ENST00000557623 P04436 131 aa11.54□□□□□ -0.56
SLIRP-211ENST00000557623 SDC1P18827 310 aa11.54□□□□□ -0.56
SLIRP-211ENST00000557623 TACR1P25103 407 aa11.54□□□□□ -0.56
SLIRP-211ENST00000557623 RPL3P39023 403 aaKnown RBP11.54□□□□□ -0.56
SLIRP-211ENST00000557623 UQCRFS1P47985 274 aa11.54□□□□□ -0.56
SLIRP-211ENST00000557623 TMED10P49755 219 aaKnown RBP11.54□□□□□ -0.56
SLIRP-211ENST00000557623 MEOX1P50221 254 aa11.54□□□□□ -0.56
SLIRP-211ENST00000557623 NR0B1P51843 470 aaKnown RBP11.54□□□□□ -0.56
SLIRP-211ENST00000557623 TDGF1P3P51864 188 aa11.54□□□□□ -0.56
SLIRP-211ENST00000557623 WDR4P57081 412 aaKnown RBP11.54□□□□□ -0.56
SLIRP-211ENST00000557623 DCAF7P61962 342 aa11.54□□□□□ -0.56
SLIRP-211ENST00000557623 PMP22Q01453 160 aa11.54□□□□□ -0.56
SLIRP-211ENST00000557623 ALDH6A1Q02252 535 aaKnown RBP11.54□□□□□ -0.56
SLIRP-211ENST00000557623 MRPL49Q13405 166 aaKnown RBP11.54□□□□□ -0.56
SLIRP-211ENST00000557623 LTB4RQ15722 352 aa11.54□□□□□ -0.56
SLIRP-211ENST00000557623 SMU1Q2TAY7 513 aa11.54□□□□□ -0.56
SLIRP-211ENST00000557623 ZNF628Q5EBL2 1059 aa11.54□□□□□ -0.56
SLIRP-211ENST00000557623 FHL5Q5TD97 284 aa11.54□□□□□ -0.56
SLIRP-211ENST00000557623 CES4AQ5XG92 561 aa11.54□□□□□ -0.56
SLIRP-211ENST00000557623 ATG16L1Q676U5 607 aa11.54□□□□□ -0.56
SLIRP-211ENST00000557623 MDGA2Q7Z553 956 aa11.54□□□□□ -0.56
SLIRP-211ENST00000557623 R3HCC1LQ7Z5L2 792 aaKnown RBP11.54□□□□□ -0.56
SLIRP-211ENST00000557623 SULF2Q8IWU5 870 aa11.54□□□□□ -0.56
SLIRP-211ENST00000557623 ZNF441Q8N8Z8 693 aa11.54□□□□□ -0.56
SLIRP-211ENST00000557623 OR52R1Q8NGF1 315 aa11.54□□□□□ -0.56
SLIRP-211ENST00000557623 OR9A2Q8NGT5 310 aa11.54□□□□□ -0.56
SLIRP-211ENST00000557623 C16orf52Q8NHV5 167 aa11.54□□□□□ -0.56
SLIRP-211ENST00000557623 MGARPQ8TDB4 240 aa11.54□□□□□ -0.56
SLIRP-211ENST00000557623 ADIPOR1Q96A54 375 aa11.54□□□□□ -0.56
SLIRP-211ENST00000557623 TUBGCP3Q96CW5 907 aa11.54□□□□□ -0.56
SLIRP-211ENST00000557623 MTERF3Q96E29 417 aa11.54□□□□□ -0.56
SLIRP-211ENST00000557623 SPACA9Q96E40 222 aaPredicted RBP11.54□□□□□ -0.56
SLIRP-211ENST00000557623 EGLN2Q96KS0 407 aa11.54□□□□□ -0.56
SLIRP-211ENST00000557623 FRMD6Q96NE9 622 aa11.54□□□□□ -0.56
SLIRP-211ENST00000557623 C20orf27Q9GZN8 174 aa11.54□□□□□ -0.56
SLIRP-211ENST00000557623 REEP4Q9H6H4 257 aa11.54□□□□□ -0.56
SLIRP-211ENST00000557623 SACM1LQ9NTJ5 587 aa11.54□□□□□ -0.56
SLIRP-211ENST00000557623 HAO1Q9UJM8 370 aa11.54□□□□□ -0.56
SLIRP-211ENST00000557623 ATP6AP2A0A1C7CYW4 349 aa11.53□□□□□ -0.56
SLIRP-211ENST00000557623 ZNF354AO60765 605 aaPredicted RBP11.53□□□□□ -0.56
SLIRP-211ENST00000557623 TBX19O60806 448 aa11.53□□□□□ -0.56
SLIRP-211ENST00000557623 ATP6AP2O75787 350 aa11.53□□□□□ -0.56
SLIRP-211ENST00000557623 CBX7O95931 251 aa11.53□□□□□ -0.56
SLIRP-211ENST00000557623 FBXO45P0C2W1 286 aa11.53□□□□□ -0.56
SLIRP-211ENST00000557623 PRPS2P11908 318 aa11.53□□□□□ -0.56
SLIRP-211ENST00000557623 BCKDHAP12694 445 aa11.53□□□□□ -0.56
SLIRP-211ENST00000557623 PCSK2P16519 638 aa11.53□□□□□ -0.56
SLIRP-211ENST00000557623 CNR1P21554 472 aa11.53□□□□□ -0.56
SLIRP-211ENST00000557623 GPX3P22352 226 aa11.53□□□□□ -0.56
SLIRP-211ENST00000557623 HPCAL1P37235 193 aa11.53□□□□□ -0.56
SLIRP-211ENST00000557623 NCBP2P52298 156 aaKnown RBP eCLIP11.53□□□□□ -0.567e-14■■■□□ 15.3
SLIRP-211ENST00000557623 RPP38P78345 283 aaKnown RBP11.53□□□□□ -0.56
SLIRP-211ENST00000557623 BST1Q10588 318 aa11.53□□□□□ -0.56
SLIRP-211ENST00000557623 EXOSC7Q15024 291 aaKnown RBP11.53□□□□□ -0.56
SLIRP-211ENST00000557623 PDCD2Q16342 344 aaPredicted RBP11.53□□□□□ -0.56
SLIRP-211ENST00000557623 ZNF791Q3KP31 576 aaPredicted RBP11.53□□□□□ -0.56
SLIRP-211ENST00000557623 TRMT12Q53H54 448 aaKnown RBP11.53□□□□□ -0.56
SLIRP-211ENST00000557623 KRTCAP3Q53RY4 240 aa11.53□□□□□ -0.56
SLIRP-211ENST00000557623 C6orf136Q5SQH8 315 aa11.53□□□□□ -0.56
SLIRP-211ENST00000557623 SLC22A10Q63ZE4 541 aa11.53□□□□□ -0.56
SLIRP-211ENST00000557623 FNDC5Q8NAU1 212 aa11.53□□□□□ -0.56
SLIRP-211ENST00000557623 PPCDCQ96CD2 204 aa11.53□□□□□ -0.56
SLIRP-211ENST00000557623 HSPBAP1Q96EW2 488 aa11.53□□□□□ -0.56
SLIRP-211ENST00000557623 ATP6V1G3Q96LB4 118 aa11.53□□□□□ -0.56
SLIRP-211ENST00000557623 C3orf30Q96M34 536 aa11.53□□□□□ -0.56
SLIRP-211ENST00000557623 TSSK3Q96PN8 268 aa11.53□□□□□ -0.56
SLIRP-211ENST00000557623 SORT1Q99523 831 aa11.53□□□□□ -0.56
SLIRP-211ENST00000557623 ZNF395Q9H8N7 513 aaPredicted RBP11.53□□□□□ -0.56
SLIRP-211ENST00000557623 THAP1Q9NVV9 213 aa11.53□□□□□ -0.56
SLIRP-211ENST00000557623 SEC14L3Q9UDX4 400 aa11.53□□□□□ -0.56
SLIRP-211ENST00000557623 EXO1Q9UQ84 846 aaKnown RBP11.53□□□□□ -0.56
SLIRP-211ENST00000557623 EIF3LQ9Y262 564 aaKnown RBP11.53□□□□□ -0.56
SLIRP-211ENST00000557623 SPENQ96T58 3664 aaKnown RBP11.53□□□□□ -0.56
SLIRP-211ENST00000557623 FASNP49327 2511 aaKnown RBP11.53□□□□□ -0.56
SLIRP-211ENST00000557623 SVILO95425 2214 aa11.52□□□□□ -0.56
SLIRP-211ENST00000557623 A0A087WV62 115 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 PLOD2O00469 737 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 TP53I11O14683 189 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 ACOX3O15254 700 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 AKAP10O43572 662 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 PLOD3O60568 738 aa11.52□□□□□ -0.57
SLIRP-211ENST00000557623 COQ9O75208 318 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms