RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 CLDN16Q9Y5I7 305 aa7.72□□□□□ -1.17
PSEN1-223ENST00000557511 ANKUB1A6NFN9 424 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 HMGB1P1B2RPK0 211 aaPredicted RBP7.71□□□□□ -1.18
PSEN1-223ENST00000557511 TCP11X1B4DZS4 312 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 NPIPB8E9PQR5 432 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 SLCO1B7G3V0H7 640 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 PYCARD-AS1I3L0S3 204 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 ACOT7O00154 380 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 LSM1O15116 133 aaKnown RBP7.71□□□□□ -1.18
PSEN1-223ENST00000557511 PDPK1O15530 556 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 OIP5O43482 229 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 AKAP10O43572 662 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 PEX1O43933 1283 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 NME2P1O60361 137 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 LYPLA1O75608 230 aaPredicted RBP7.71□□□□□ -1.18
PSEN1-223ENST00000557511 IGKV3-11P04433 115 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 ARAFP10398 606 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 PRPS2P11908 318 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 PCSK2P16519 638 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 ZNF24P17028 368 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 NME2P22392 152 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 GNLYP22749 145 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 SOX3P41225 446 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 NR0B1P51843 470 aaKnown RBP7.71□□□□□ -1.18
PSEN1-223ENST00000557511 SLC37A1P57057 533 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 PSPHP78330 225 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 RAE1P78406 368 aaKnown RBP7.71□□□□□ -1.18
PSEN1-223ENST00000557511 FUT7Q11130 342 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 MAP4K2Q12851 820 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 EBPQ15125 230 aaKnown RBP7.71□□□□□ -1.18
PSEN1-223ENST00000557511 ZNHIT3Q15649 155 aaPredicted RBP7.71□□□□□ -1.18
PSEN1-223ENST00000557511 PDCD2Q16342 344 aaPredicted RBP7.71□□□□□ -1.18
PSEN1-223ENST00000557511 PRR30Q53SZ7 412 aaPredicted RBP7.71□□□□□ -1.18
PSEN1-223ENST00000557511 PIGGQ5H8A4 983 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 FAM71E1Q6IPT2 247 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 PAOXQ6QHF9 649 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 GK5Q6ZS86 529 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 Q6ZSR9 355 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 FAM47EQ6ZV65 393 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.71□□□□□ -1.18
PSEN1-223ENST00000557511 NATD1Q8N6N6 113 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 ZNF321PQ8N8H1 164 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 GOLM1Q8NBJ4 401 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 ST6GALNAC3Q8NDV1 305 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 MDS2Q8NDY4 140 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 FAM13CQ8NE31 585 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 ADCY4Q8NFM4 1077 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 ZNF675Q8TD23 568 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 DOK4Q8TEW6 326 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 EDARADDQ8WWZ3 215 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 NR4A3Q92570 626 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 UCN3Q969E3 161 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 MTERF3Q96E29 417 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 DTNBP1Q96EV8 351 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 ZBED6CLQ96FA7 236 aaPredicted RBP7.71□□□□□ -1.18
PSEN1-223ENST00000557511 SCMH1Q96GD3 660 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 ATP6V1G3Q96LB4 118 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 TSSK3Q96PN8 268 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 SIGLEC12Q96PQ1 595 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 NPAS2Q99743 824 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 WWTR1Q9GZV5 400 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 REEP4Q9H6H4 257 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 TRIM45Q9H8W5 580 aaPredicted RBP7.71□□□□□ -1.18
PSEN1-223ENST00000557511 LIN28AQ9H9Z2 209 aaKnown RBP7.71□□□□□ -1.18
PSEN1-223ENST00000557511 TNFRSF12AQ9NP84 129 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 SACM1LQ9NTJ5 587 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 ATAD3AQ9NVI7 634 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 THAP1Q9NVV9 213 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 TAS2R9Q9NYW1 312 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 HEY2Q9UBP5 337 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 SEC14L3Q9UDX4 400 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 ZDHHC2Q9UIJ5 367 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 ZNF223Q9UK11 482 aaPredicted RBP7.71□□□□□ -1.18
PSEN1-223ENST00000557511 LOC400499M0QZD8 3231 aa7.71□□□□□ -1.18
PSEN1-223ENST00000557511 MED13Q9UHV7 2174 aa7.7□□□□□ -1.18
PSEN1-223ENST00000557511 TNRC6AQ8NDV7 1962 aaKnown RBP7.7□□□□□ -1.18
PSEN1-223ENST00000557511 TLN1Q9Y490 2541 aaKnown RBP7.7□□□□□ -1.18
PSEN1-223ENST00000557511 ATP6AP2A0A1C7CYW4 349 aa7.7□□□□□ -1.18
PSEN1-223ENST00000557511 TRPC5OSA6NMA1 111 aa7.7□□□□□ -1.18
PSEN1-223ENST00000557511 TMEM233B4DJY2 109 aa7.7□□□□□ -1.18
PSEN1-223ENST00000557511 TFECO14948 347 aaPredicted RBP7.7□□□□□ -1.18
PSEN1-223ENST00000557511 ACOX3O15254 700 aa7.7□□□□□ -1.18
PSEN1-223ENST00000557511 PRKNO60260 465 aaPredicted RBP7.7□□□□□ -1.18
PSEN1-223ENST00000557511 ATP6AP2O75787 350 aa7.7□□□□□ -1.18
PSEN1-223ENST00000557511 NEURL1O76050 574 aa7.7□□□□□ -1.18
PSEN1-223ENST00000557511 OR6B1O95007 311 aa7.7□□□□□ -1.18
PSEN1-223ENST00000557511 AGFG2O95081 481 aa7.7□□□□□ -1.18
PSEN1-223ENST00000557511 LRATO95237 230 aa7.7□□□□□ -1.18
PSEN1-223ENST00000557511 JUNP05412 331 aaKnown RBP7.7□□□□□ -1.18
PSEN1-223ENST00000557511 DHRS4L1P0CG22 281 aa7.7□□□□□ -1.18
PSEN1-223ENST00000557511 BCKDHAP12694 445 aa7.7□□□□□ -1.18
PSEN1-223ENST00000557511 CNR1P21554 472 aa7.7□□□□□ -1.18
PSEN1-223ENST00000557511 ADH6P28332 368 aa7.7□□□□□ -1.18
PSEN1-223ENST00000557511 SSTR4P31391 388 aa7.7□□□□□ -1.18
PSEN1-223ENST00000557511 MEOX1P50221 254 aa7.7□□□□□ -1.18
PSEN1-223ENST00000557511 ST13P50502 369 aaKnown RBP7.7□□□□□ -1.18
PSEN1-223ENST00000557511 MANFP55145 182 aaKnown RBP7.7□□□□□ -1.18
PSEN1-223ENST00000557511 MRPS22P82650 360 aaKnown RBP7.7□□□□□ -1.18
PSEN1-223ENST00000557511 PLCXD2Q0VAA5 305 aa7.7□□□□□ -1.18
PSEN1-223ENST00000557511 SMU1Q2TAY7 513 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms