RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 DIAPH2O60879 1101 aa2.93□□□□□ -1.94
VRK1-207ENST00000557352 KBTBD11O94819 623 aa2.93□□□□□ -1.94
VRK1-207ENST00000557352 LUC7L3O95232 432 aaKnown RBP2.93□□□□□ -1.94
VRK1-207ENST00000557352 CTNNA2P26232 953 aa2.93□□□□□ -1.94
VRK1-207ENST00000557352 GNA11P29992 359 aa2.93□□□□□ -1.94
VRK1-207ENST00000557352 PRPHP41219 470 aa2.93□□□□□ -1.94
VRK1-207ENST00000557352 GMPSP49915 693 aaPredicted RBP2.93□□□□□ -1.94
VRK1-207ENST00000557352 IL10RBQ08334 325 aa2.93□□□□□ -1.94
VRK1-207ENST00000557352 PSMD6Q15008 389 aa2.93□□□□□ -1.94
VRK1-207ENST00000557352 LTB4RQ15722 352 aa2.93□□□□□ -1.94
VRK1-207ENST00000557352 LRRC37A5PQ49AS3 106 aa2.93□□□□□ -1.94
VRK1-207ENST00000557352 ZNF542PQ5EBM4 170 aa2.93□□□□□ -1.94
VRK1-207ENST00000557352 RPUSD3Q6P087 351 aaKnown RBP2.93□□□□□ -1.94
VRK1-207ENST00000557352 MOXD1Q6UVY6 613 aa2.93□□□□□ -1.94
VRK1-207ENST00000557352 USP50Q70EL3 339 aaPredicted RBP2.93□□□□□ -1.94
VRK1-207ENST00000557352 CCDC186Q7Z3E2 898 aa2.93□□□□□ -1.94
VRK1-207ENST00000557352 NRARPQ7Z6K4 114 aa2.93□□□□□ -1.94
VRK1-207ENST00000557352 PRR22Q8IZ63 422 aa2.93□□□□□ -1.94
VRK1-207ENST00000557352 APCDD1Q8J025 514 aa2.93□□□□□ -1.94
VRK1-207ENST00000557352 NME8Q8N427 588 aa2.93□□□□□ -1.94
VRK1-207ENST00000557352 LINC00301Q8NCQ3 95 aa2.93□□□□□ -1.94
VRK1-207ENST00000557352 OR6J1Q8NGC5 347 aa2.93□□□□□ -1.94
VRK1-207ENST00000557352 FLVCR1-AS1Q8TAF5 88 aa2.93□□□□□ -1.94
VRK1-207ENST00000557352 SLC26A7Q8TE54 656 aa2.93□□□□□ -1.94
VRK1-207ENST00000557352 C12orf42Q96LP6 360 aa2.93□□□□□ -1.94
VRK1-207ENST00000557352 RANBP9Q96S59 729 aa2.93□□□□□ -1.94
VRK1-207ENST00000557352 ALKBH7Q9BT30 221 aaPredicted RBP2.93□□□□□ -1.94
VRK1-207ENST00000557352 GTPBP2Q9BX10 602 aaKnown RBP2.93□□□□□ -1.94
VRK1-207ENST00000557352 OR10A4Q9H209 315 aa2.93□□□□□ -1.94
VRK1-207ENST00000557352 DDX19AQ9NUU7 478 aaKnown RBP2.93□□□□□ -1.94
VRK1-207ENST00000557352 WDR35Q9P2L0 1181 aa2.93□□□□□ -1.94
VRK1-207ENST00000557352 Q9UF83 564 aa2.93□□□□□ -1.94
VRK1-207ENST00000557352 STX8Q9UNK0 236 aa2.93□□□□□ -1.94
VRK1-207ENST00000557352 SLC6A5Q9Y345 797 aa2.93□□□□□ -1.94
VRK1-207ENST00000557352 CCL27Q9Y4X3 112 aa2.93□□□□□ -1.94
VRK1-207ENST00000557352 DDX49Q9Y6V7 483 aaKnown RBP2.93□□□□□ -1.94
VRK1-207ENST00000557352 ANK1P16157 1881 aa2.92□□□□□ -1.94
VRK1-207ENST00000557352 FRMPD3Q5JV73 1810 aa2.92□□□□□ -1.94
VRK1-207ENST00000557352 TRAV18A0A075B6X5 111 aa2.92□□□□□ -1.94
VRK1-207ENST00000557352 IGLON5A6NGN9 336 aa2.92□□□□□ -1.94
VRK1-207ENST00000557352 A8MXE2 369 aa2.92□□□□□ -1.94
VRK1-207ENST00000557352 C19orf81C9J6K1 198 aa2.92□□□□□ -1.94
VRK1-207ENST00000557352 E5RGE8 158 aa2.92□□□□□ -1.94
VRK1-207ENST00000557352 ZBTB5O15062 677 aa2.92□□□□□ -1.94
VRK1-207ENST00000557352 WDR46O15213 610 aaKnown RBP2.92□□□□□ -1.94
VRK1-207ENST00000557352 MLNRO43193 412 aa2.92□□□□□ -1.94
VRK1-207ENST00000557352 SRPX2O60687 465 aaPredicted RBP2.92□□□□□ -1.94
VRK1-207ENST00000557352 TBX10O75333 385 aa2.92□□□□□ -1.94
VRK1-207ENST00000557352 PLEKHA8P1O95397 391 aa2.92□□□□□ -1.94
VRK1-207ENST00000557352 ANGPTL1O95841 491 aa2.92□□□□□ -1.94
VRK1-207ENST00000557352 EEF2P13639 858 aaKnown RBP2.92□□□□□ -1.94
VRK1-207ENST00000557352 GCFC2P16383 781 aaKnown RBP2.92□□□□□ -1.94
VRK1-207ENST00000557352 CMA1P23946 247 aa2.92□□□□□ -1.94
VRK1-207ENST00000557352 RPL9P32969 192 aaKnown RBP2.92□□□□□ -1.94
VRK1-207ENST00000557352 SPRP35270 261 aaPredicted RBP2.92□□□□□ -1.94
VRK1-207ENST00000557352 RGS7P49802 495 aa2.92□□□□□ -1.94
VRK1-207ENST00000557352 NAAAQ02083 359 aa2.92□□□□□ -1.94
VRK1-207ENST00000557352 CCL14Q16627 93 aa2.92□□□□□ -1.94
VRK1-207ENST00000557352 TAZQ16635 292 aa2.92□□□□□ -1.94
VRK1-207ENST00000557352 TTC31Q49AM3 519 aaPredicted RBP2.92□□□□□ -1.94
VRK1-207ENST00000557352 SLC22A6Q4U2R8 563 aa2.92□□□□□ -1.94
VRK1-207ENST00000557352 C2orf83Q53S99 150 aa2.92□□□□□ -1.94
VRK1-207ENST00000557352 CCDC183Q5T5S1 534 aa2.92□□□□□ -1.94
VRK1-207ENST00000557352 ADCK2Q7Z695 626 aa2.92□□□□□ -1.94
VRK1-207ENST00000557352 BLIDQ8IZY5 108 aa2.92□□□□□ -1.94
VRK1-207ENST00000557352 CRYGNQ8WXF5 182 aa2.92□□□□□ -1.94
VRK1-207ENST00000557352 MRPS27Q92552 414 aaKnown RBP2.92□□□□□ -1.94
VRK1-207ENST00000557352 VPS33AQ96AX1 596 aa2.92□□□□□ -1.94
VRK1-207ENST00000557352 RAB3IPQ96QF0 476 aaPredicted RBP2.92□□□□□ -1.94
VRK1-207ENST00000557352 VCPKMTQ9H867 229 aa2.92□□□□□ -1.94
VRK1-207ENST00000557352 SP140LQ9H930 580 aa2.92□□□□□ -1.94
VRK1-207ENST00000557352 IL17CQ9P0M4 197 aa2.92□□□□□ -1.94
VRK1-207ENST00000557352 NAP1L2Q9ULW6 460 aaPredicted RBP2.92□□□□□ -1.94
VRK1-207ENST00000557352 NOL7Q9UMY1 257 aaKnown RBP2.92□□□□□ -1.94
VRK1-207ENST00000557352 NSG2Q9Y328 171 aa2.92□□□□□ -1.94
VRK1-207ENST00000557352 FRMPD4Q14CM0 1322 aa2.92□□□□□ -1.94
VRK1-207ENST00000557352 THSD7BQ9C0I4 1608 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 RALGAPA2Q2PPJ7 1873 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 CLRN2A0PK11 232 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 GOLGA6L4A6NEF3 574 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 URADA6NGE7 173 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 TMEM150CB9EJG8 249 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 F5H6K3 240 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 NDUFB10O96000 172 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 C9P02748 559 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 TCF4P15884 667 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 SSTR1P30872 391 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 PPP5CP53041 499 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 MFAP3P55082 362 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 BACE1P56817 501 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 FKBP1BP68106 108 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 KLRC3Q07444 240 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 TCP10Q12799 353 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 CAMK2DQ13557 499 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 COG2Q14746 738 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 STK38Q15208 465 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 ECSCRQ19T08 205 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 FAM174BQ3ZCQ3 159 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 VWA2Q5GFL6 755 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 KHDRBS2Q5VWX1 349 aaKnown RBP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms