RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 BICRALQ6AI39 1079 aa12.99□□□□□ -0.33
SNX6-210ENST00000557341 PACS2Q86VP3 889 aa12.99□□□□□ -0.33
SNX6-210ENST00000557341 LCA5Q86VQ0 697 aa12.99□□□□□ -0.33
SNX6-210ENST00000557341 ULK2Q8IYT8 1036 aa12.99□□□□□ -0.33
SNX6-210ENST00000557341 PRR22Q8IZ63 422 aa12.99□□□□□ -0.33
SNX6-210ENST00000557341 KLHL29Q96CT2 875 aa12.99□□□□□ -0.33
SNX6-210ENST00000557341 MTBPQ96DY7 904 aa12.99□□□□□ -0.33
SNX6-210ENST00000557341 HBEGFQ99075 208 aa12.99□□□□□ -0.33
SNX6-210ENST00000557341 FAIM2Q9BWQ8 316 aa12.99□□□□□ -0.33
SNX6-210ENST00000557341 ANGPTL4Q9BY76 406 aa12.99□□□□□ -0.33
SNX6-210ENST00000557341 NXF5Q9H1B4 397 aaKnown RBP12.99□□□□□ -0.33
SNX6-210ENST00000557341 MAT2BQ9NZL9 334 aa12.99□□□□□ -0.33
SNX6-210ENST00000557341 CES1P1Q9UKY3 287 aa12.99□□□□□ -0.33
SNX6-210ENST00000557341 PSME2Q9UL46 239 aa12.99□□□□□ -0.33
SNX6-210ENST00000557341 DTX4Q9Y2E6 619 aa12.99□□□□□ -0.33
SNX6-210ENST00000557341 PPP6CO00743 305 aa12.98□□□□□ -0.33
SNX6-210ENST00000557341 CDH16O75309 829 aa12.98□□□□□ -0.33
SNX6-210ENST00000557341 SUPT7LO94864 414 aa12.98□□□□□ -0.33
SNX6-210ENST00000557341 OR4F21O95013 312 aa12.98□□□□□ -0.33
SNX6-210ENST00000557341 KRT6AP02538 564 aa12.98□□□□□ -0.33
SNX6-210ENST00000557341 KRT6BP04259 564 aa12.98□□□□□ -0.33
SNX6-210ENST00000557341 HSD3B1P14060 373 aa12.98□□□□□ -0.33
SNX6-210ENST00000557341 CSNK2A2P19784 350 aaPredicted RBP12.98□□□□□ -0.33
SNX6-210ENST00000557341 HSD3B2P26439 372 aa12.98□□□□□ -0.33
SNX6-210ENST00000557341 FEN1P39748 380 aaKnown RBP12.98□□□□□ -0.33
SNX6-210ENST00000557341 CASP3P42574 277 aa12.98□□□□□ -0.33
SNX6-210ENST00000557341 KRT6CP48668 564 aa12.98□□□□□ -0.33
SNX6-210ENST00000557341 ALDH9A1P49189 494 aa12.98□□□□□ -0.33
SNX6-210ENST00000557341 TRA2BP62995 288 aaKnown RBP12.98□□□□□ -0.33
SNX6-210ENST00000557341 CRYZQ08257 329 aaKnown RBP12.98□□□□□ -0.33
SNX6-210ENST00000557341 CSTF3Q12996 717 aaKnown RBP12.98□□□□□ -0.33
SNX6-210ENST00000557341 DUSP8Q13202 625 aa12.98□□□□□ -0.33
SNX6-210ENST00000557341 MYBPHQ13203 477 aa12.98□□□□□ -0.33
SNX6-210ENST00000557341 RASA2Q15283 850 aa12.98□□□□□ -0.33
SNX6-210ENST00000557341 ZNF678Q5SXM1 525 aa12.98□□□□□ -0.33
SNX6-210ENST00000557341 WDR53Q7Z5U6 358 aaPredicted RBP12.98□□□□□ -0.33
SNX6-210ENST00000557341 TMEM200AQ86VY9 491 aa12.98□□□□□ -0.33
SNX6-210ENST00000557341 MMP21Q8N119 569 aa12.98□□□□□ -0.33
SNX6-210ENST00000557341 TMEM151AQ8N4L1 468 aa12.98□□□□□ -0.33
SNX6-210ENST00000557341 C1orf52Q8N6N3 182 aaKnown RBP12.98□□□□□ -0.33
SNX6-210ENST00000557341 CDYL2Q8N8U2 506 aa12.98□□□□□ -0.33
SNX6-210ENST00000557341 TMEM41AQ96HV5 264 aa12.98□□□□□ -0.33
SNX6-210ENST00000557341 TMEM237Q96Q45 408 aa12.98□□□□□ -0.33
SNX6-210ENST00000557341 ZNF382Q96SR6 550 aa12.98□□□□□ -0.33
SNX6-210ENST00000557341 ITPAQ9BY32 194 aa12.98□□□□□ -0.33
SNX6-210ENST00000557341 UBQLN3Q9H347 655 aa12.98□□□□□ -0.33
SNX6-210ENST00000557341 METTL7AQ9H8H3 244 aa12.98□□□□□ -0.33
SNX6-210ENST00000557341 BCAP29Q9UHQ4 241 aa12.98□□□□□ -0.33
SNX6-210ENST00000557341 ZNF225Q9UK10 706 aa12.98□□□□□ -0.33
SNX6-210ENST00000557341 STK38LQ9Y2H1 464 aa12.98□□□□□ -0.33
SNX6-210ENST00000557341 C15orf41Q9Y2V0 281 aa12.98□□□□□ -0.33
SNX6-210ENST00000557341 ZNF780BQ9Y6R6 833 aa12.98□□□□□ -0.33
SNX6-210ENST00000557341 MED12Q93074 2177 aa12.97□□□□□ -0.33
SNX6-210ENST00000557341 MED12LQ86YW9 2145 aa12.97□□□□□ -0.33
SNX6-210ENST00000557341 HSPB2A8KAH6 182 aa12.97□□□□□ -0.33
SNX6-210ENST00000557341 ACOX3O15254 700 aa12.97□□□□□ -0.33
SNX6-210ENST00000557341 PPM1BO75688 479 aa12.97□□□□□ -0.33
SNX6-210ENST00000557341 TRAPPC6AO75865 159 aa12.97□□□□□ -0.33
SNX6-210ENST00000557341 HPNP05981 417 aa12.97□□□□□ -0.33
SNX6-210ENST00000557341 NAGAP17050 411 aa12.97□□□□□ -0.33
SNX6-210ENST00000557341 S1PR1P21453 382 aa12.97□□□□□ -0.33
SNX6-210ENST00000557341 GCAP28676 217 aa12.97□□□□□ -0.33
SNX6-210ENST00000557341 HSD17B3P37058 310 aa12.97□□□□□ -0.33
SNX6-210ENST00000557341 CDK9P50750 372 aaKnown RBP12.97□□□□□ -0.33
SNX6-210ENST00000557341 MAP4K2Q12851 820 aa12.97□□□□□ -0.33
SNX6-210ENST00000557341 EXOSC7Q15024 291 aaKnown RBP12.97□□□□□ -0.33
SNX6-210ENST00000557341 TOMM20Q15388 145 aa12.97□□□□□ -0.33
SNX6-210ENST00000557341 HSPB2Q16082 182 aa12.97□□□□□ -0.33
SNX6-210ENST00000557341 ACSF3Q4G176 576 aaPredicted RBP12.97□□□□□ -0.33
SNX6-210ENST00000557341 TCHHL1Q5QJ38 904 aaPredicted RBP12.97□□□□□ -0.33
SNX6-210ENST00000557341 CES4AQ5XG92 561 aa12.97□□□□□ -0.33
SNX6-210ENST00000557341 FAM111BQ6SJ93 734 aa12.97□□□□□ -0.33
SNX6-210ENST00000557341 GPRIN3Q6ZVF9 776 aa12.97□□□□□ -0.33
SNX6-210ENST00000557341 LIX1LQ8IVB5 337 aa12.97□□□□□ -0.33
SNX6-210ENST00000557341 PM20D2Q8IYS1 436 aa12.97□□□□□ -0.33
SNX6-210ENST00000557341 TM4SF18Q96CE8 201 aa12.97□□□□□ -0.33
SNX6-210ENST00000557341 HSPBAP1Q96EW2 488 aa12.97□□□□□ -0.33
SNX6-210ENST00000557341 CNRIP1Q96F85 164 aaPredicted RBP12.97□□□□□ -0.33
SNX6-210ENST00000557341 LCORQ96JN0 433 aaPredicted RBP12.97□□□□□ -0.33
SNX6-210ENST00000557341 TMEM216Q9P0N5 145 aa12.97□□□□□ -0.33
SNX6-210ENST00000557341 VPS29Q9UBQ0 182 aa12.97□□□□□ -0.33
SNX6-210ENST00000557341 NFU1Q9UMS0 254 aa12.97□□□□□ -0.33
SNX6-210ENST00000557341 PLLPQ9Y342 182 aa12.97□□□□□ -0.33
SNX6-210ENST00000557341 SPG11Q96JI7 2443 aa12.97□□□□□ -0.33
SNX6-210ENST00000557341 AHRRA9YTQ3 701 aa12.96□□□□□ -0.33
SNX6-210ENST00000557341 KIF2AO00139 706 aaPredicted RBP12.96□□□□□ -0.33
SNX6-210ENST00000557341 MANBAO00462 879 aa12.96□□□□□ -0.33
SNX6-210ENST00000557341 PCDH7O60245 1069 aa12.96□□□□□ -0.33
SNX6-210ENST00000557341 ZWINTO95229 277 aa12.96□□□□□ -0.33
SNX6-210ENST00000557341 ESRRBO95718 433 aa12.96□□□□□ -0.33
SNX6-210ENST00000557341 CBX7O95931 251 aa12.96□□□□□ -0.33
SNX6-210ENST00000557341 ABCB1P08183 1280 aaPredicted RBP12.96□□□□□ -0.33
SNX6-210ENST00000557341 HMOX2P30519 316 aa12.96□□□□□ -0.33
SNX6-210ENST00000557341 PLCXD2Q0VAA5 305 aa12.96□□□□□ -0.33
SNX6-210ENST00000557341 MGAT2Q10469 447 aa12.96□□□□□ -0.33
SNX6-210ENST00000557341 UNC50Q53HI1 259 aa12.96□□□□□ -0.33
SNX6-210ENST00000557341 FNDC7Q5VTL7 733 aa12.96□□□□□ -0.33
SNX6-210ENST00000557341 FAM219BQ5XKK7 198 aa12.96□□□□□ -0.33
SNX6-210ENST00000557341 TMEM81Q6P7N7 255 aa12.96□□□□□ -0.33
SNX6-210ENST00000557341 TIFABQ6ZNK6 161 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms