RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 APOL2Q9BQE5 337 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 CCDC77Q9BR77 488 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 GBA3Q9H227 469 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 SH2D2AQ9NP31 389 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 SEMA4BQ9NPR2 832 aaPredicted RBP4.28□□□□□ -1.72
SCFD1-223ENST00000557076 TUBA8Q9NY65 449 aaPredicted RBP4.28□□□□□ -1.72
SCFD1-223ENST00000557076 UVRAGQ9P2Y5 699 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 LIMA1Q9UHB6 759 aaKnown RBP4.28□□□□□ -1.72
SCFD1-223ENST00000557076 PCYOX1Q9UHG3 505 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 ZNF223Q9UK11 482 aaPredicted RBP4.28□□□□□ -1.72
SCFD1-223ENST00000557076 NAALAD2Q9Y3Q0 740 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 ATG4BQ9Y4P1 393 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 IKBKGQ9Y6K9 419 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 HEATR5BQ9P2D3 2071 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 DYSFO75923 2080 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 CCDC162PA2VCL2 907 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 FRG2CA6NGY1 282 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 UNC119BA6NIH7 251 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 LRRC53A6NM62 1247 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 A8MUA0 341 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 E7ENX8 843 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 MYO1CO00159 1063 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 WWP2O00308 870 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 PRMT5O14744 637 aaPredicted RBP4.27□□□□□ -1.73
SCFD1-223ENST00000557076 PRKNO60260 465 aaPredicted RBP4.27□□□□□ -1.73
SCFD1-223ENST00000557076 GPRIN2O60269 458 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 LCMT2O60294 686 aaKnown RBP4.27□□□□□ -1.73
SCFD1-223ENST00000557076 CST8O60676 142 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 GALR3O60755 368 aaPredicted RBP4.27□□□□□ -1.73
SCFD1-223ENST00000557076 CLEC2LP0C7M8 214 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 TMIGD3P0DMS9 266 aaPredicted RBP4.27□□□□□ -1.73
SCFD1-223ENST00000557076 EGR2P11161 476 aaPredicted RBP4.27□□□□□ -1.73
SCFD1-223ENST00000557076 SKILP12757 684 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 SRD5A1P18405 259 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 MAOAP21397 527 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 MSNP26038 577 aaKnown RBP4.27□□□□□ -1.73
SCFD1-223ENST00000557076 FOXN2P32314 431 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 SOX3P41225 446 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 CPA2P48052 419 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 DNASE1L1P49184 302 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 COMPP49747 757 aaPredicted RBP4.27□□□□□ -1.73
SCFD1-223ENST00000557076 EIF3BP55884 814 aaKnown RBP4.27□□□□□ -1.73
SCFD1-223ENST00000557076 WNT3P56703 355 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 PHC1P78364 1004 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 VLDLRP98155 873 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 SRSF2Q01130 221 aaKnown RBP4.27□□□□□ -1.73
SCFD1-223ENST00000557076 FAM27E3Q08E93 113 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 FOXF2Q12947 444 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 SQLEQ14534 574 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 PRPSAP1Q14558 356 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 TMED2Q15363 201 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 MPEG1Q2M385 716 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 PDCD4Q53EL6 469 aaKnown RBP4.27□□□□□ -1.73
SCFD1-223ENST00000557076 HIST2H2BDQ6DRA6 164 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 ITPRIPL1Q6GPH6 555 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 CAPN13Q6MZZ7 669 aaPredicted RBP4.27□□□□□ -1.73
SCFD1-223ENST00000557076 OPN5Q6U736 354 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 HSDL2Q6YN16 418 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 APTXQ7Z2E3 356 aaKnown RBP4.27□□□□□ -1.73
SCFD1-223ENST00000557076 ADCK2Q7Z695 626 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 LUZP2Q86TE4 346 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 GLCCI1Q86VQ1 547 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 PLD3Q8IV08 490 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 KLHDC8BQ8IXV7 354 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 BOLLQ8N9W6 283 aaKnown RBP4.27□□□□□ -1.73
SCFD1-223ENST00000557076 OR5T3Q8NGG3 340 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 OR5L2Q8NGL0 311 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 OR8K3Q8NH51 312 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 SLC22A8Q8TCC7 542 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 SKA2Q8WVK7 121 aaPredicted RBP4.27□□□□□ -1.73
SCFD1-223ENST00000557076 TFAP2CQ92754 450 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 P3H4Q92791 437 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 LRRC45Q96CN5 670 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 WDYHV1Q96HA8 205 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 PPP1R2P1Q96PQ5 205 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 TNFRSF13CQ96RJ3 184 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 TRIB1Q96RU8 372 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 TBL1YQ9BQ87 522 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 MED18Q9BUE0 208 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 SPATA5L1Q9BVQ7 753 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 LIN28AQ9H9Z2 209 aaKnown RBP4.27□□□□□ -1.73
SCFD1-223ENST00000557076 NECTIN3Q9NQS3 549 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 ELOVL5Q9NYP7 299 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 FETUBQ9UGM5 382 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 TAC3Q9UHF0 121 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 RIMKLBQ9ULI2 386 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 BOKQ9UMX3 212 aaPredicted RBP4.27□□□□□ -1.73
SCFD1-223ENST00000557076 MMACHCQ9Y4U1 282 aa4.27□□□□□ -1.73
SCFD1-223ENST00000557076 HEATR5AQ86XA9 2040 aa4.26□□□□□ -1.73
SCFD1-223ENST00000557076 SCN3AQ9NY46 2000 aa4.26□□□□□ -1.73
SCFD1-223ENST00000557076 KIAA1549Q9HCM3 1950 aa4.26□□□□□ -1.73
SCFD1-223ENST00000557076 C15orf38-AP3S2A0A0A6YYH1 394 aa4.26□□□□□ -1.73
SCFD1-223ENST00000557076 KRT87PA6NCN2 255 aa4.26□□□□□ -1.73
SCFD1-223ENST00000557076 OR51F1A6NGY5 319 aa4.26□□□□□ -1.73
SCFD1-223ENST00000557076 MARCH11A6NNE9 402 aa4.26□□□□□ -1.73
SCFD1-223ENST00000557076 C16orf97H3BN30 126 aa4.26□□□□□ -1.73
SCFD1-223ENST00000557076 EIF3FO00303 357 aaPredicted RBP4.26□□□□□ -1.73
SCFD1-223ENST00000557076 HS3ST1O14792 307 aa4.26□□□□□ -1.73
SCFD1-223ENST00000557076 LMX1BO60663 402 aa4.26□□□□□ -1.73
SCFD1-223ENST00000557076 AVILO75366 819 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms