RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 LTB4RQ15722 352 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 TBR1Q16650 682 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 MEP1AQ16819 746 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 PRSS53Q2L4Q9 553 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 MPEG1Q2M385 716 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 VPS26BQ4G0F5 336 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 TIGD2Q4W5G0 525 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 TRMT12Q53H54 448 aaKnown RBP7.1□□□□□ -1.27
TDP1-214ENST00000556063 C6orf10Q5SRN2 563 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 ZCCHC12Q6PEW1 402 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 C19orf48Q6RUI8 117 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 TMEM107Q6UX40 140 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 ISLR2Q6UXK2 745 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 TMEM64Q6YI46 380 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 ANKRD46Q86W74 232 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 RPS19BP1Q86WX3 136 aaKnown RBP7.1□□□□□ -1.27
TDP1-214ENST00000556063 HPS6Q86YV9 775 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 TAGAPQ8N103 731 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 APCDD1LQ8NCL9 501 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 OR52R1Q8NGF1 315 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 OR4A15Q8NGL6 344 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 OR9I1Q8NGQ6 314 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 DNAJB8Q8NHS0 232 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 PSMA8Q8TAA3 256 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 SLC22A8Q8TCC7 542 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 SFXN5Q8TD22 340 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 BCAS4Q8TDM0 211 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 BRIX1Q8TDN6 353 aaKnown RBP7.1□□□□□ -1.27
TDP1-214ENST00000556063 MAGED4Q96JG8 741 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 CCDC115Q96NT0 180 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 MS4A4EQ96PG1 132 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 LRRC37BQ96QE4 947 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 GAL3ST4Q96RP7 486 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 LMF1Q96S06 567 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 MESP1Q9BRJ9 268 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 NUDT9Q9BW91 350 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 NMUR2Q9GZQ4 415 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 OR10A5Q9H207 317 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 ADNPQ9H2P0 1102 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 EPS8L2Q9H6S3 715 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 SLAMF7Q9NQ25 335 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 ZCCHC3Q9NUD5 404 aaKnown RBP7.1□□□□□ -1.27
TDP1-214ENST00000556063 ZNF639Q9UID6 485 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 TUBD1Q9UJT1 453 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 LEF1Q9UJU2 399 aaPredicted RBP7.1□□□□□ -1.27
TDP1-214ENST00000556063 VPS4AQ9UN37 437 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 FAF1Q9UNN5 650 aaPredicted RBP7.1□□□□□ -1.27
TDP1-214ENST00000556063 C19orf53Q9UNZ5 99 aaPredicted RBP7.1□□□□□ -1.27
TDP1-214ENST00000556063 NDUFAF1Q9Y375 327 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 PCDHGB7Q9Y5F8 929 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 PCDHGA9Q9Y5G4 932 aaKnown RBP7.1□□□□□ -1.27
TDP1-214ENST00000556063 EPG5Q9HCE0 2579 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 BBIP1A8MTZ0 92 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 CAPN14A8MX76 684 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 C9JVG2 144 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 UPK1AO00322 258 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 ERN1O75460 977 aaKnown RBP7.09□□□□□ -1.27
TDP1-214ENST00000556063 CEACAM4O75871 244 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 KRT75O95678 551 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 CBX7O95931 251 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 CT62P0C5K7 136 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 ZCCHC18P0CG32 403 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 S1PR1P21453 382 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 UQCRC2P22695 453 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 KRT20P35900 424 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 MAGEA8P43361 318 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 CDK9P50750 372 aaKnown RBP7.09□□□□□ -1.27
TDP1-214ENST00000556063 PRKAG1P54619 331 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 POLE2P56282 527 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 WNT3P56703 355 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 NRG3P56975 720 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 HBA1P69905 142 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 PHC1P78364 1004 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 TXNL4AP83876 142 aaKnown RBP7.09□□□□□ -1.27
TDP1-214ENST00000556063 Q0VFX4 171 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 MGAT2Q10469 447 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 ZNF155Q12901 538 aaPredicted RBP7.09□□□□□ -1.27
TDP1-214ENST00000556063 MFAP5Q13361 173 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 CYLC2Q14093 348 aaPredicted RBP7.09□□□□□ -1.27
TDP1-214ENST00000556063 UBAP2LQ14157 1087 aaKnown RBP7.09□□□□□ -1.27
TDP1-214ENST00000556063 EXOSC7Q15024 291 aaKnown RBP7.09□□□□□ -1.27
TDP1-214ENST00000556063 COL28A1Q2UY09 1125 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 MMEL1Q495T6 779 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 ACER2Q5QJU3 275 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 H3F3CQ6NXT2 135 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 DGAT2L6Q6ZPD8 337 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 ZNF621Q6ZSS3 439 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 MTDHQ86UE4 582 aaKnown RBP7.09□□□□□ -1.27
TDP1-214ENST00000556063 FUNDC1Q8IVP5 155 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 DND1Q8IYX4 353 aaKnown RBP7.09□□□□□ -1.27
TDP1-214ENST00000556063 CLECL1Q8IZS7 167 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 OR2L13Q8N349 312 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 KIF2BQ8N4N8 673 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 TMEM156Q8N614 296 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 SLC15A4Q8N697 577 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 SIRT6Q8N6T7 355 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 HORMAD2Q8N7B1 307 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 ZNF615Q8N8J6 731 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 CDRT4Q8N9R6 151 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 PCYOX1LQ8NBM8 494 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms