RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 PDYNP01213 254 aa17.17■□□□□ 0.34
CPSF2-203ENST00000554290 IL2RAP01589 272 aa17.17■□□□□ 0.34
CPSF2-203ENST00000554290 ATP1B1P05026 303 aa17.17■□□□□ 0.34
CPSF2-203ENST00000554290 RPS17P08708 135 aaKnown RBP17.17■□□□□ 0.34
CPSF2-203ENST00000554290 S1PR1P21453 382 aa17.17■□□□□ 0.34
CPSF2-203ENST00000554290 BMP5P22003 454 aa17.17■□□□□ 0.34
CPSF2-203ENST00000554290 ABCD3P28288 659 aa17.17■□□□□ 0.34
CPSF2-203ENST00000554290 UQCRC1P31930 480 aa17.17■□□□□ 0.34
CPSF2-203ENST00000554290 TIMP3P35625 211 aa17.17■□□□□ 0.34
CPSF2-203ENST00000554290 KIR2DL3P43628 341 aa17.17■□□□□ 0.34
CPSF2-203ENST00000554290 PRICKLE4Q2TBC4 344 aa17.17■□□□□ 0.34
CPSF2-203ENST00000554290 VASNQ6EMK4 673 aa17.17■□□□□ 0.34
CPSF2-203ENST00000554290 SEM1Q6ZVN7 128 aa17.17■□□□□ 0.34
CPSF2-203ENST00000554290 NUP54Q7Z3B4 507 aa17.17■□□□□ 0.34
CPSF2-203ENST00000554290 PRR22Q8IZ63 422 aa17.17■□□□□ 0.34
CPSF2-203ENST00000554290 MMGT1Q8N4V1 131 aa17.17■□□□□ 0.34
CPSF2-203ENST00000554290 ZNF483Q8TF39 744 aaPredicted RBP17.17■□□□□ 0.34
CPSF2-203ENST00000554290 HSPBAP1Q96EW2 488 aa17.17■□□□□ 0.34
CPSF2-203ENST00000554290 FAIM2Q9BWQ8 316 aa17.17■□□□□ 0.34
CPSF2-203ENST00000554290 NXF5Q9H1B4 397 aaKnown RBP17.17■□□□□ 0.34
CPSF2-203ENST00000554290 UBQLN3Q9H347 655 aa17.17■□□□□ 0.34
CPSF2-203ENST00000554290 METTL7AQ9H8H3 244 aa17.17■□□□□ 0.34
CPSF2-203ENST00000554290 DNAJB12Q9NXW2 375 aaKnown RBP17.17■□□□□ 0.34
CPSF2-203ENST00000554290 CES1P1Q9UKY3 287 aa17.17■□□□□ 0.34
CPSF2-203ENST00000554290 A0A087WUV0 522 aaPredicted RBP17.16■□□□□ 0.34
CPSF2-203ENST00000554290 ABCB1P08183 1280 aaPredicted RBP17.16■□□□□ 0.34
CPSF2-203ENST00000554290 CEACAM8P31997 349 aaPredicted RBP17.16■□□□□ 0.34
CPSF2-203ENST00000554290 FEN1P39748 380 aaKnown RBP17.16■□□□□ 0.34
CPSF2-203ENST00000554290 ASCL1P50553 236 aa17.16■□□□□ 0.34
CPSF2-203ENST00000554290 ART1P52961 327 aa17.16■□□□□ 0.34
CPSF2-203ENST00000554290 CDH13P55290 713 aa17.16■□□□□ 0.34
CPSF2-203ENST00000554290 TRA2BP62995 288 aaKnown RBP17.16■□□□□ 0.34
CPSF2-203ENST00000554290 LGSNQ5TDP6 509 aa17.16■□□□□ 0.34
CPSF2-203ENST00000554290 FNDC7Q5VTL7 733 aa17.16■□□□□ 0.34
CPSF2-203ENST00000554290 LETMD1Q6P1Q0 360 aa17.16■□□□□ 0.34
CPSF2-203ENST00000554290 FAM111BQ6SJ93 734 aa17.16■□□□□ 0.34
CPSF2-203ENST00000554290 RPS27LQ71UM5 84 aaKnown RBP17.16■□□□□ 0.34
CPSF2-203ENST00000554290 ZZZ3Q8IYH5 903 aa17.16■□□□□ 0.34
CPSF2-203ENST00000554290 MNS1Q8NEH6 495 aa17.16■□□□□ 0.34
CPSF2-203ENST00000554290 TNIP2Q8NFZ5 429 aa17.16■□□□□ 0.34
CPSF2-203ENST00000554290 OR1J4Q8NGS1 313 aa17.16■□□□□ 0.34
CPSF2-203ENST00000554290 DCAKDQ8WVC6 231 aa17.16■□□□□ 0.34
CPSF2-203ENST00000554290 KLHL29Q96CT2 875 aa17.16■□□□□ 0.34
CPSF2-203ENST00000554290 C1QTNF3Q9BXJ4 246 aa17.16■□□□□ 0.34
CPSF2-203ENST00000554290 POLDIP3Q9BY77 421 aaKnown RBP17.16■□□□□ 0.34
CPSF2-203ENST00000554290 PRDM14Q9GZV8 571 aa17.16■□□□□ 0.34
CPSF2-203ENST00000554290 ZNF629Q9UEG4 869 aaPredicted RBP17.16■□□□□ 0.34
CPSF2-203ENST00000554290 TRPS1Q9UHF7 1281 aa17.16■□□□□ 0.34
CPSF2-203ENST00000554290 DMGDHQ9UI17 866 aaKnown RBP17.16■□□□□ 0.34
CPSF2-203ENST00000554290 CAMK2AQ9UQM7 478 aa17.16■□□□□ 0.34
CPSF2-203ENST00000554290 SLC6A5Q9Y345 797 aa17.16■□□□□ 0.34
CPSF2-203ENST00000554290 ZNF780BQ9Y6R6 833 aa17.16■□□□□ 0.34
CPSF2-203ENST00000554290 A8MT66 165 aa17.15■□□□□ 0.34
CPSF2-203ENST00000554290 PPP6CO00743 305 aa17.15■□□□□ 0.34
CPSF2-203ENST00000554290 ACOX3O15254 700 aa17.15■□□□□ 0.34
CPSF2-203ENST00000554290 CTAG2O75638 210 aa17.15■□□□□ 0.34
CPSF2-203ENST00000554290 SNRPAP09012 282 aaKnown RBP17.15■□□□□ 0.34
CPSF2-203ENST00000554290 DNAJA1P31689 397 aaKnown RBP17.15■□□□□ 0.34
CPSF2-203ENST00000554290 GCKP35557 465 aa17.15■□□□□ 0.34
CPSF2-203ENST00000554290 ALDH9A1P49189 494 aa17.15■□□□□ 0.34
CPSF2-203ENST00000554290 DCAF7P61962 342 aa17.15■□□□□ 0.34
CPSF2-203ENST00000554290 MGAT2Q10469 447 aa17.15■□□□□ 0.34
CPSF2-203ENST00000554290 GALNT1Q10472 559 aaPredicted RBP17.15■□□□□ 0.34
CPSF2-203ENST00000554290 EXOSC7Q15024 291 aaKnown RBP17.15■□□□□ 0.34
CPSF2-203ENST00000554290 NNATQ16517 81 aa17.15■□□□□ 0.34
CPSF2-203ENST00000554290 NHSL2Q5HYW2 709 aa17.15■□□□□ 0.34
CPSF2-203ENST00000554290 TEX35Q5T0J7 233 aa17.15■□□□□ 0.34
CPSF2-203ENST00000554290 NSUN5P2Q63ZY6 315 aa17.15■□□□□ 0.34
CPSF2-203ENST00000554290 TIGD3Q6B0B8 471 aa17.15■□□□□ 0.34
CPSF2-203ENST00000554290 SLC30A6Q6NXT4 461 aa17.15■□□□□ 0.34
CPSF2-203ENST00000554290 UHMK1Q8TAS1 419 aaKnown RBP17.15■□□□□ 0.34
CPSF2-203ENST00000554290 TM4SF18Q96CE8 201 aa17.15■□□□□ 0.34
CPSF2-203ENST00000554290 LCORQ96JN0 433 aaPredicted RBP17.15■□□□□ 0.34
CPSF2-203ENST00000554290 C16orf45Q96MC5 204 aaPredicted RBP17.15■□□□□ 0.34
CPSF2-203ENST00000554290 MAT2BQ9NZL9 334 aa17.15■□□□□ 0.34
CPSF2-203ENST00000554290 VPS29Q9UBQ0 182 aa17.15■□□□□ 0.34
CPSF2-203ENST00000554290 ZNF639Q9UID6 485 aa17.15■□□□□ 0.34
CPSF2-203ENST00000554290 FOXD3Q9UJU5 478 aaPredicted RBP17.15■□□□□ 0.34
CPSF2-203ENST00000554290 EDARQ9UNE0 448 aa17.15■□□□□ 0.34
CPSF2-203ENST00000554290 DTX4Q9Y2E6 619 aa17.15■□□□□ 0.34
CPSF2-203ENST00000554290 A0A1B0GTL3 188 aa17.14■□□□□ 0.33
CPSF2-203ENST00000554290 GNB5O14775 395 aa17.14■□□□□ 0.33
CPSF2-203ENST00000554290 KRT6AP02538 564 aa17.14■□□□□ 0.33
CPSF2-203ENST00000554290 KRT6BP04259 564 aa17.14■□□□□ 0.33
CPSF2-203ENST00000554290 HSD3B1P14060 373 aa17.14■□□□□ 0.33
CPSF2-203ENST00000554290 BMP7P18075 431 aa17.14■□□□□ 0.33
CPSF2-203ENST00000554290 TSPAN8P19075 237 aa17.14■□□□□ 0.33
CPSF2-203ENST00000554290 TAC1P20366 129 aa17.14■□□□□ 0.33
CPSF2-203ENST00000554290 HSD3B2P26439 372 aa17.14■□□□□ 0.33
CPSF2-203ENST00000554290 PTPN6P29350 595 aa17.14■□□□□ 0.33
CPSF2-203ENST00000554290 KRT6CP48668 564 aa17.14■□□□□ 0.33
CPSF2-203ENST00000554290 CLCQ05315 142 aa17.14■□□□□ 0.33
CPSF2-203ENST00000554290 PLCXD2Q0VAA5 305 aa17.14■□□□□ 0.33
CPSF2-203ENST00000554290 SNTA1Q13424 505 aa17.14■□□□□ 0.33
CPSF2-203ENST00000554290 SNTB1Q13884 538 aaKnown RBP17.14■□□□□ 0.33
CPSF2-203ENST00000554290 GLE1Q53GS7 698 aaKnown RBP17.14■□□□□ 0.33
CPSF2-203ENST00000554290 WIPI1Q5MNZ9 446 aaPredicted RBP17.14■□□□□ 0.33
CPSF2-203ENST00000554290 TMEM81Q6P7N7 255 aa17.14■□□□□ 0.33
CPSF2-203ENST00000554290 ANGPTL8Q6UXH0 198 aa17.14■□□□□ 0.33
CPSF2-203ENST00000554290 TMEM151AQ8N4L1 468 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms