RNA–Protein interactions for RNA: ENST00000553710.1

KTN1-211, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-211ENST00000553710 SUCLG1P53597 346 aaKnown RBP0.64□□□□□ -2.31
KTN1-211ENST00000553710 BAATQ14032 418 aaPredicted RBP0.64□□□□□ -2.31
KTN1-211ENST00000553710 SERTAD2Q14140 314 aa0.64□□□□□ -2.31
KTN1-211ENST00000553710 PCLAFQ15004 111 aa0.64□□□□□ -2.31
KTN1-211ENST00000553710 PPA1Q15181 289 aa0.64□□□□□ -2.31
KTN1-211ENST00000553710 DEFB115Q30KQ5 88 aa0.64□□□□□ -2.31
KTN1-211ENST00000553710 ODF2Q5BJF6 829 aa0.64□□□□□ -2.31
KTN1-211ENST00000553710 C6orf163Q5TEZ5 329 aa0.64□□□□□ -2.31
KTN1-211ENST00000553710 SLC27A4Q6P1M0 643 aa0.64□□□□□ -2.31
KTN1-211ENST00000553710 ZFP2Q6ZN57 461 aa0.64□□□□□ -2.31
KTN1-211ENST00000553710 ZNF836Q6ZNA1 936 aa0.64□□□□□ -2.31
KTN1-211ENST00000553710 TMEM179BQ7Z7N9 219 aa0.64□□□□□ -2.31
KTN1-211ENST00000553710 MMAAQ8IVH4 418 aaKnown RBP0.64□□□□□ -2.31
KTN1-211ENST00000553710 ELMOD1Q8N336 334 aa0.64□□□□□ -2.31
KTN1-211ENST00000553710 DCAF4L2Q8NA75 395 aa0.64□□□□□ -2.31
KTN1-211ENST00000553710 CD99L2Q8TCZ2 262 aa0.64□□□□□ -2.31
KTN1-211ENST00000553710 TFB1MQ8WVM0 346 aaKnown RBP0.64□□□□□ -2.31
KTN1-211ENST00000553710 SMPDL3AQ92484 453 aa0.64□□□□□ -2.31
KTN1-211ENST00000553710 SLC35E1Q96K37 410 aa0.64□□□□□ -2.31
KTN1-211ENST00000553710 ALKBH7Q9BT30 221 aaPredicted RBP0.64□□□□□ -2.31
KTN1-211ENST00000553710 C19orf24Q9BVV8 132 aa0.64□□□□□ -2.31
KTN1-211ENST00000553710 TEX12Q9BXU0 123 aa0.64□□□□□ -2.31
KTN1-211ENST00000553710 MRPL1Q9BYD6 325 aaKnown RBP0.64□□□□□ -2.31
KTN1-211ENST00000553710 SLC17A9Q9BYT1 436 aa0.64□□□□□ -2.31
KTN1-211ENST00000553710 NACAP1Q9BZK3 213 aa0.64□□□□□ -2.31
KTN1-211ENST00000553710 SNX25Q9H3E2 840 aa0.64□□□□□ -2.31
KTN1-211ENST00000553710 DPEP2Q9H4A9 486 aa0.64□□□□□ -2.31
KTN1-211ENST00000553710 DPEP3Q9H4B8 488 aa0.64□□□□□ -2.31
KTN1-211ENST00000553710 XAB2Q9HCS7 855 aaKnown RBP0.64□□□□□ -2.31
KTN1-211ENST00000553710 ZDHHC4Q9NPG8 344 aa0.64□□□□□ -2.31
KTN1-211ENST00000553710 STOX2Q9P2F5 926 aaPredicted RBP0.64□□□□□ -2.31
KTN1-211ENST00000553710 MLXQ9UH92 298 aa0.64□□□□□ -2.31
KTN1-211ENST00000553710 NSG2Q9Y328 171 aa0.64□□□□□ -2.31
KTN1-211ENST00000553710 SH3GLB1Q9Y371 365 aa0.64□□□□□ -2.31
KTN1-211ENST00000553710 CACNG2Q9Y698 323 aa0.64□□□□□ -2.31
KTN1-211ENST00000553710 FGD5Q6ZNL6 1462 aa0.64□□□□□ -2.31
KTN1-211ENST00000553710 ABCA4P78363 2273 aa0.64□□□□□ -2.31
KTN1-211ENST00000553710 LYSTQ99698 3801 aa0.64□□□□□ -2.31
KTN1-211ENST00000553710 ACACAQ13085 2346 aa0.64□□□□□ -2.31
KTN1-211ENST00000553710 CADP27708 2225 aa0.64□□□□□ -2.31
KTN1-211ENST00000553710 LRRC37A2A6NM11 1700 aa0.64□□□□□ -2.31
KTN1-211ENST00000553710 ANKRD26Q9UPS8 1709 aa0.64□□□□□ -2.31
KTN1-211ENST00000553710 ABCA5Q8WWZ7 1642 aa0.64□□□□□ -2.31
KTN1-211ENST00000553710 ZFYVE16Q7Z3T8 1539 aa0.64□□□□□ -2.31
KTN1-211ENST00000553710 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.64□□□□□ -2.31
KTN1-211ENST00000553710 SPATA31E1Q6ZUB1 1445 aa0.64□□□□□ -2.31
KTN1-211ENST00000553710 MED13Q9UHV7 2174 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 COL4A1P02462 1669 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 TOPAZ1Q8N9V7 1692 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 SAMD9LQ8IVG5 1584 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 CCDC88BA6NC98 1476 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 PZPP20742 1482 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 GRIN2BQ13224 1484 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 TRBV6-6A0A0A6YYG2 114 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 SYNDIG1LA6NDD5 238 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 TMEM150CB9EJG8 249 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 J3QKU1 62 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 PGRMC2O15173 223 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 WDHD1O75717 1129 aaPredicted RBP0.63□□□□□ -2.31
KTN1-211ENST00000553710 MBD4O95243 580 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 TBX18O95935 607 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 CCDC159P0C7I6 412 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 GABRR1P24046 479 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 GCH1P30793 250 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 ID1P41134 155 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 SLC1A3P43003 542 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 OR3A4PP47883 348 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 CAV2P51636 162 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 LIMK1P53667 647 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 NAP1L1P55209 391 aaKnown RBP0.63□□□□□ -2.31
KTN1-211ENST00000553710 UBASH3AP57075 661 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 ARF3P61204 181 aaPredicted RBP0.63□□□□□ -2.31
KTN1-211ENST00000553710 ARF1P84077 181 aaKnown RBP0.63□□□□□ -2.31
KTN1-211ENST00000553710 FUT7Q11130 342 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 KRTAP13-4Q3LI77 160 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 SUSD4Q5VX71 490 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 ZNF770Q6IQ21 691 aaPredicted RBP0.63□□□□□ -2.31
KTN1-211ENST00000553710 MOB1BQ7L9L4 216 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 SLC43A2Q8N370 569 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 CADM2Q8N3J6 435 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 FBXW8Q8N3Y1 598 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 C8orf46Q8TAG6 207 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 GRK7Q8WTQ7 553 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 ARNTL2Q8WYA1 636 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 PIWIL1Q96J94 861 aaKnown RBP0.63□□□□□ -2.31
KTN1-211ENST00000553710 CAPNS2Q96L46 248 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 FOPNLQ96NB1 174 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 UBQLN3Q9H347 655 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 SYNCQ9H7C4 482 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 GIMAP4Q9NUV9 329 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 OLAHQ9NV23 265 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 FLVCR1Q9Y5Y0 555 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 USH2AO75445 5202 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 TUBGCP6Q96RT7 1819 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 ITSN1Q15811 1721 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 DNAH7Q8WXX0 4024 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 EFCAB5A4FU69 1503 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 NEXMIFQ5QGS0 1516 aa0.63□□□□□ -2.31
KTN1-211ENST00000553710 SRRM2Q9UQ35 2752 aaKnown RBP0.62□□□□□ -2.31
KTN1-211ENST00000553710 QRICH2Q9H0J4 1663 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms