RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 MYO6Q9UM54 1294 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 CORO2BQ9UQ03 480 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 SLC6A5Q9Y345 797 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 SNX13Q9Y5W8 968 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 A0A096LNT2 108 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 UQCRHLA0A096LP55 91 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 A0A1W2PNV4 684 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 E7ENX8 843 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 H0Y3Z8 333 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 FAM229AH3BQW9 127 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 GFYI3L273 518 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 HAT1O14929 419 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 EMC8O43402 210 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 TNFSF13O75888 250 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 VENTXO95231 258 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 FTCDO95954 541 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 PLAUP00749 431 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 CYP1A2P05177 515 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 CD8BP10966 210 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 APEHP13798 732 aaKnown RBP4.66□□□□□ -1.66
CKAP4-203ENST00000553039 MSNP26038 577 aaKnown RBP4.66□□□□□ -1.66
CKAP4-203ENST00000553039 DPP4P27487 766 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 PTPN6P29350 595 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 ADRA1AP35348 466 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 KLK7P49862 253 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 HK2P52789 917 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 RPP38P78345 283 aaKnown RBP4.66□□□□□ -1.66
CKAP4-203ENST00000553039 SRYQ05066 204 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 RGS1Q08116 209 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 MGAT2Q10469 447 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 GALNT1Q10472 559 aaPredicted RBP4.66□□□□□ -1.66
CKAP4-203ENST00000553039 SLC13A2Q13183 592 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 MSLNQ13421 630 aaPredicted RBP4.66□□□□□ -1.66
CKAP4-203ENST00000553039 RCN2Q14257 317 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 IQCB1Q15051 598 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 ELAVL1Q15717 326 aaKnown RBP4.66□□□□□ -1.66
CKAP4-203ENST00000553039 ZNF791Q3KP31 576 aaPredicted RBP4.66□□□□□ -1.66
CKAP4-203ENST00000553039 DEFB134Q4QY38 66 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 FASTKD1Q53R41 847 aaKnown RBP4.66□□□□□ -1.66
CKAP4-203ENST00000553039 HSP90AA4PQ58FG1 418 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 AWAT1Q58HT5 328 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 FAM182AQ5T1J6 154 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 PTRHD1Q6GMV3 140 aaKnown RBP4.66□□□□□ -1.66
CKAP4-203ENST00000553039 VN1R4Q7Z5H5 301 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 PEG10Q86TG7 708 aaKnown RBP4.66□□□□□ -1.66
CKAP4-203ENST00000553039 PDSS2Q86YH6 399 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 RFX6Q8HWS3 928 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 ZNF567Q8N184 647 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 TC2NQ8N9U0 490 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 ZNF540Q8NDQ6 660 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 OR5T3Q8NGG3 340 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 ZCCHC10Q8TBK6 192 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 WFDC12Q8WWY7 111 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 RAPGEF5Q92565 580 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 TP53INP1Q96A56 240 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 MSI2Q96DH6 328 aaKnown RBP4.66□□□□□ -1.66
CKAP4-203ENST00000553039 ZNF845Q96IR2 970 aaPredicted RBP4.66□□□□□ -1.66
CKAP4-203ENST00000553039 DNAJC1Q96KC8 554 aaKnown RBP4.66□□□□□ -1.66
CKAP4-203ENST00000553039 ZNF597Q96LX8 424 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 MACROD1Q9BQ69 325 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 TUBA1CQ9BQE3 449 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 HDHD5Q9BXW7 423 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 PITHD1Q9GZP4 211 aaPredicted RBP4.66□□□□□ -1.66
CKAP4-203ENST00000553039 OR10A4Q9H209 315 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 RHBGQ9H310 441 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 ZMAT3Q9HA38 289 aaKnown RBP4.66□□□□□ -1.66
CKAP4-203ENST00000553039 NECTIN3Q9NQS3 549 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 PRTFDC1Q9NRG1 225 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 ABCF3Q9NUQ8 709 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 NOP53Q9NZM5 478 aaKnown RBP4.66□□□□□ -1.66
CKAP4-203ENST00000553039 ASH2LQ9UBL3 628 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 COPS7AQ9UBW8 275 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 ZNF148Q9UQR1 794 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 MRPS33Q9Y291 106 aaKnown RBP4.66□□□□□ -1.66
CKAP4-203ENST00000553039 RNF115Q9Y4L5 304 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 PCDHGB1Q9Y5G3 927 aa4.66□□□□□ -1.66
CKAP4-203ENST00000553039 MED12Q93074 2177 aa4.65□□□□□ -1.66
CKAP4-203ENST00000553039 PRAMEF25A6NGN4 478 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 ZNF860A6NHJ4 632 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 GOLGA6L6A8MZA4 724 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 HACD1B0YJ81 288 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 NDUFS8O00217 210 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 EIF3FO00303 357 aaPredicted RBP4.65□□□□□ -1.67
CKAP4-203ENST00000553039 CCL22O00626 93 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 PRMT5O14744 637 aaPredicted RBP4.65□□□□□ -1.67
CKAP4-203ENST00000553039 CLOCKO15516 846 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 DYRK3O43781 588 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 ZBTB14O43829 449 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 PRKNO60260 465 aaPredicted RBP4.65□□□□□ -1.67
CKAP4-203ENST00000553039 OR1I1O60431 355 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 NDUFS7O75251 213 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 TRIM3O75382 744 aaPredicted RBP4.65□□□□□ -1.67
CKAP4-203ENST00000553039 GAS8O95995 478 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 CATP04040 527 aaKnown RBP4.65□□□□□ -1.67
CKAP4-203ENST00000553039 ALDOAP04075 364 aaKnown RBP4.65□□□□□ -1.67
CKAP4-203ENST00000553039 SERPIND1P05546 499 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 PTMAP06454 111 aaKnown RBP4.65□□□□□ -1.67
CKAP4-203ENST00000553039 TPM3P06753 285 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 PRSS56P0CW18 603 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms