RNA–Protein interactions for RNA: ENST00000552491.5

LIMA1-212, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 2,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-212ENST00000552491 KIAA1549LQ6ZVL6 1849 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 COL4A3Q01955 1670 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 CXorf51AA0A1B0GTR3 108 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.12□□□□□ -1.59
LIMA1-212ENST00000552491 QSOX1O00391 747 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 PLPP1O14494 284 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 PLOD3O60568 738 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 LEFTY1O75610 366 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 RAB36O95755 333 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 LIMS3P0CW19 117 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 LIMS4P0CW20 117 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 CPN2P22792 545 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 ERP29P30040 261 aaKnown RBP5.12□□□□□ -1.59
LIMA1-212ENST00000552491 VIPR1P32241 457 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 MAP2K3P46734 347 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 GIPRP48546 466 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 METAP1P53582 386 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 WNT4P56705 351 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 POLR2LP62875 67 aaKnown RBP5.12□□□□□ -1.59
LIMA1-212ENST00000552491 HSPB3Q12988 150 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 QPRTQ15274 297 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 PLK5Q496M5 336 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 CRTC2Q53ET0 693 aaPredicted RBP5.12□□□□□ -1.59
LIMA1-212ENST00000552491 SLC25A30Q5SVS4 291 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 TPGS2Q68CL5 300 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 TIGD3Q6B0B8 471 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 QSOX2Q6ZRP7 698 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 C6orf120Q7Z4R8 191 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 C11orf74Q86VG3 221 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 PEX5LQ8IYB4 626 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 CFAP206Q8IYR0 622 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 TRAM1L1Q8N609 369 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 ZNF366Q8N895 744 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 AMER3Q8N944 861 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 TMEM145Q8NBT3 493 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 ZNF485Q8NCK3 441 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 MORN4Q8NDC4 146 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 ENKURQ8TC29 256 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 GLYATL1Q969I3 302 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 KCTD7Q96MP8 289 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 TEFMQ96QE5 360 aaKnown RBP5.12□□□□□ -1.59
LIMA1-212ENST00000552491 CITED4Q96RK1 184 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 MED18Q9BUE0 208 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 ACAT2Q9BWD1 397 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 POLDIP3Q9BY77 421 aaKnown RBP5.12□□□□□ -1.59
LIMA1-212ENST00000552491 MRPL9Q9BYD2 267 aaKnown RBP5.12□□□□□ -1.59
LIMA1-212ENST00000552491 NLNQ9BYT8 704 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 KCNK12Q9HB15 430 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 RRAGCQ9HB90 399 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 A4GALTQ9NPC4 353 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 MIEF1Q9NQG6 463 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 KLHL21Q9UJP4 597 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 PLAGL1Q9UM63 463 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 ICKQ9UPZ9 632 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 PCYT1BQ9Y5K3 369 aaPredicted RBP5.12□□□□□ -1.59
LIMA1-212ENST00000552491 NUMA1Q14980 2115 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 MYO7AQ13402 2215 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 COL4A6Q14031 1691 aa5.12□□□□□ -1.59
LIMA1-212ENST00000552491 LOC102723532A0A0G2JNH3 316 aa5.11□□□□□ -1.59
LIMA1-212ENST00000552491 C5orf58C9J3I9 102 aa5.11□□□□□ -1.59
LIMA1-212ENST00000552491 K7ESM1 405 aa5.11□□□□□ -1.59
LIMA1-212ENST00000552491 MEN1O00255 615 aa5.11□□□□□ -1.59
LIMA1-212ENST00000552491 LEFTY2O00292 366 aa5.11□□□□□ -1.59
LIMA1-212ENST00000552491 PPM1DO15297 605 aa5.11□□□□□ -1.59
LIMA1-212ENST00000552491 TPD52L2O43399 206 aaKnown RBP5.11□□□□□ -1.59
LIMA1-212ENST00000552491 LILRB5O75023 590 aa5.11□□□□□ -1.59
LIMA1-212ENST00000552491 ATG13O75143 517 aa5.11□□□□□ -1.59
LIMA1-212ENST00000552491 TRIM3O75382 744 aaPredicted RBP5.11□□□□□ -1.59
LIMA1-212ENST00000552491 NME6O75414 186 aaPredicted RBP5.11□□□□□ -1.59
LIMA1-212ENST00000552491 PDE9AO76083 593 aa5.11□□□□□ -1.59
LIMA1-212ENST00000552491 HLA-DQB1P01920 261 aa5.11□□□□□ -1.59
LIMA1-212ENST00000552491 SOD2P04179 222 aa5.11□□□□□ -1.59
LIMA1-212ENST00000552491 SLC2A2P11168 524 aaPredicted RBP5.11□□□□□ -1.59
LIMA1-212ENST00000552491 DDX5P17844 614 aaKnown RBP5.11□□□□□ -1.59
LIMA1-212ENST00000552491 WEE1P30291 646 aa5.11□□□□□ -1.59
LIMA1-212ENST00000552491 EVI2BP34910 448 aa5.11□□□□□ -1.59
LIMA1-212ENST00000552491 MAPK9P45984 424 aa5.11□□□□□ -1.59
LIMA1-212ENST00000552491 EPHB3P54753 998 aa5.11□□□□□ -1.59
LIMA1-212ENST00000552491 CTBP2P56545 445 aa5.11□□□□□ -1.59
LIMA1-212ENST00000552491 RAB25P57735 213 aa5.11□□□□□ -1.59
LIMA1-212ENST00000552491 DCDC1P59894 354 aa5.11□□□□□ -1.59
LIMA1-212ENST00000552491 CDK5Q00535 292 aa5.11□□□□□ -1.59
LIMA1-212ENST00000552491 C19orf57Q0VDD7 668 aa5.11□□□□□ -1.59
LIMA1-212ENST00000552491 MAP4K2Q12851 820 aa5.11□□□□□ -1.59
LIMA1-212ENST00000552491 TPBGQ13641 420 aa5.11□□□□□ -1.59
LIMA1-212ENST00000552491 GRIN2CQ14957 1233 aa5.11□□□□□ -1.59
LIMA1-212ENST00000552491 LCN1P1Q5VSP4 162 aa5.11□□□□□ -1.59
LIMA1-212ENST00000552491 PLET1Q6UQ28 207 aa5.11□□□□□ -1.59
LIMA1-212ENST00000552491 NXPE4Q6UWF7 544 aa5.11□□□□□ -1.59
LIMA1-212ENST00000552491 B3GLCTQ6Y288 498 aa5.11□□□□□ -1.59
LIMA1-212ENST00000552491 TRILQ7L0X0 811 aa5.11□□□□□ -1.59
LIMA1-212ENST00000552491 SLC9B2Q86UD5 537 aa5.11□□□□□ -1.59
LIMA1-212ENST00000552491 LHFPL3Q86UP9 236 aa5.11□□□□□ -1.59
LIMA1-212ENST00000552491 ADIPOR2Q86V24 386 aa5.11□□□□□ -1.59
LIMA1-212ENST00000552491 IQCHQ86VS3 1027 aa5.11□□□□□ -1.59
LIMA1-212ENST00000552491 Q8N402 240 aa5.11□□□□□ -1.59
LIMA1-212ENST00000552491 VN1R2Q8NFZ6 395 aa5.11□□□□□ -1.59
LIMA1-212ENST00000552491 OR4K5Q8NGD3 323 aa5.11□□□□□ -1.59
LIMA1-212ENST00000552491 OR8D4Q8NGM9 314 aa5.11□□□□□ -1.59
LIMA1-212ENST00000552491 OR6T1Q8NGN1 323 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms