RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 CLEC4FQ8N1N0 589 aa12.1□□□□□ -0.47
RAB5C-206ENST00000550406 OR2L13Q8N349 312 aa12.1□□□□□ -0.47
RAB5C-206ENST00000550406 ZNF441Q8N8Z8 693 aa12.1□□□□□ -0.47
RAB5C-206ENST00000550406 EXD3Q8N9H8 876 aa12.1□□□□□ -0.47
RAB5C-206ENST00000550406 OR8K3Q8NH51 312 aa12.1□□□□□ -0.47
RAB5C-206ENST00000550406 GOT1L1Q8NHS2 421 aaPredicted RBP12.1□□□□□ -0.47
RAB5C-206ENST00000550406 ZFP28Q8NHY6 868 aa12.1□□□□□ -0.47
RAB5C-206ENST00000550406 THAP3Q8WTV1 239 aaPredicted RBP12.1□□□□□ -0.47
RAB5C-206ENST00000550406 ADIPOR1Q96A54 375 aa12.1□□□□□ -0.47
RAB5C-206ENST00000550406 ERP27Q96DN0 273 aa12.1□□□□□ -0.47
RAB5C-206ENST00000550406 FAM120BQ96EK7 910 aaKnown RBP12.1□□□□□ -0.47
RAB5C-206ENST00000550406 GIMAP5Q96F15 307 aa12.1□□□□□ -0.47
RAB5C-206ENST00000550406 MAGED4Q96JG8 741 aa12.1□□□□□ -0.47
RAB5C-206ENST00000550406 ART5Q96L15 291 aa12.1□□□□□ -0.47
RAB5C-206ENST00000550406 CCDC115Q96NT0 180 aa12.1□□□□□ -0.47
RAB5C-206ENST00000550406 DEFB126Q9BYW3 111 aa12.1□□□□□ -0.47
RAB5C-206ENST00000550406 MYLK2Q9H1R3 596 aa12.1□□□□□ -0.47
RAB5C-206ENST00000550406 CDCP1Q9H5V8 836 aa12.1□□□□□ -0.47
RAB5C-206ENST00000550406 SLC6A13Q9NSD5 602 aa12.1□□□□□ -0.47
RAB5C-206ENST00000550406 TMEM45AQ9NWC5 275 aa12.1□□□□□ -0.47
RAB5C-206ENST00000550406 FAM120CQ9NX05 1096 aaKnown RBP12.1□□□□□ -0.47
RAB5C-206ENST00000550406 GPR83Q9NYM4 423 aa12.1□□□□□ -0.47
RAB5C-206ENST00000550406 PTGFRNQ9P2B2 879 aa12.1□□□□□ -0.47
RAB5C-206ENST00000550406 BCAP29Q9UHQ4 241 aa12.1□□□□□ -0.47
RAB5C-206ENST00000550406 DSPP15924 2871 aaKnown RBP12.09□□□□□ -0.47
RAB5C-206ENST00000550406 DYRK3O43781 588 aa12.09□□□□□ -0.47
RAB5C-206ENST00000550406 ZFAND5O76080 213 aa12.09□□□□□ -0.47
RAB5C-206ENST00000550406 SLITRK5O94991 958 aa12.09□□□□□ -0.47
RAB5C-206ENST00000550406 NADKO95544 446 aaPredicted RBP12.09□□□□□ -0.47
RAB5C-206ENST00000550406 CPSF4O95639 269 aaKnown RBP12.09□□□□□ -0.47
RAB5C-206ENST00000550406 FAM107AO95990 144 aa12.09□□□□□ -0.47
RAB5C-206ENST00000550406 ABCB1P08183 1280 aaPredicted RBP12.09□□□□□ -0.47
RAB5C-206ENST00000550406 PTPN6P29350 595 aa12.09□□□□□ -0.47
RAB5C-206ENST00000550406 GPC1P35052 558 aa12.09□□□□□ -0.47
RAB5C-206ENST00000550406 MLF1P58340 268 aa12.09□□□□□ -0.47
RAB5C-206ENST00000550406 EBPQ15125 230 aaKnown RBP12.09□□□□□ -0.47
RAB5C-206ENST00000550406 VPS26BQ4G0F5 336 aa12.09□□□□□ -0.47
RAB5C-206ENST00000550406 TIGD2Q4W5G0 525 aa12.09□□□□□ -0.47
RAB5C-206ENST00000550406 PAGE3Q5JUK9 113 aa12.09□□□□□ -0.47
RAB5C-206ENST00000550406 EXOSC6Q5RKV6 272 aaKnown RBP12.09□□□□□ -0.47
RAB5C-206ENST00000550406 SLC2A7Q6PXP3 512 aa12.09□□□□□ -0.47
RAB5C-206ENST00000550406 MTDHQ86UE4 582 aaKnown RBP12.09□□□□□ -0.47
RAB5C-206ENST00000550406 RPS19BP1Q86WX3 136 aaKnown RBP12.09□□□□□ -0.47
RAB5C-206ENST00000550406 SPDL1Q96EA4 605 aa12.09□□□□□ -0.47
RAB5C-206ENST00000550406 C16orf58Q96GQ5 468 aa12.09□□□□□ -0.47
RAB5C-206ENST00000550406 SMAD5Q99717 465 aaKnown RBP12.09□□□□□ -0.47
RAB5C-206ENST00000550406 CCDC106Q9BWC9 280 aa12.09□□□□□ -0.47
RAB5C-206ENST00000550406 WWTR1Q9GZV5 400 aa12.09□□□□□ -0.47
RAB5C-206ENST00000550406 EPS8L2Q9H6S3 715 aa12.09□□□□□ -0.47
RAB5C-206ENST00000550406 TAS2R9Q9NYW1 312 aa12.09□□□□□ -0.47
RAB5C-206ENST00000550406 ARMCX1Q9P291 453 aa12.09□□□□□ -0.47
RAB5C-206ENST00000550406 COPS7AQ9UBW8 275 aa12.09□□□□□ -0.47
RAB5C-206ENST00000550406 PCDHGA9Q9Y5G4 932 aaKnown RBP12.09□□□□□ -0.47
RAB5C-206ENST00000550406 HEMK1Q9Y5R4 338 aaPredicted RBP12.09□□□□□ -0.47
RAB5C-206ENST00000550406 OR6C76A6NM76 312 aa12.08□□□□□ -0.48
RAB5C-206ENST00000550406 WWP2O00308 870 aa12.08□□□□□ -0.48
RAB5C-206ENST00000550406 NR5A2O00482 541 aa12.08□□□□□ -0.48
RAB5C-206ENST00000550406 CFLARO15519 480 aa12.08□□□□□ -0.48
RAB5C-206ENST00000550406 EMC8O43402 210 aa12.08□□□□□ -0.48
RAB5C-206ENST00000550406 GSNP06396 782 aa12.08□□□□□ -0.48
RAB5C-206ENST00000550406 FAM87AP0C7U9 286 aa12.08□□□□□ -0.48
RAB5C-206ENST00000550406 HOXB9P17482 250 aaPredicted RBP12.08□□□□□ -0.48
RAB5C-206ENST00000550406 MAP3K8P41279 467 aa12.08□□□□□ -0.48
RAB5C-206ENST00000550406 CCT3P49368 545 aaKnown RBP12.08□□□□□ -0.48
RAB5C-206ENST00000550406 RHDQ02161 417 aa12.08□□□□□ -0.48
RAB5C-206ENST00000550406 CRB2Q5IJ48 1285 aa12.08□□□□□ -0.48
RAB5C-206ENST00000550406 C6orf163Q5TEZ5 329 aa12.08□□□□□ -0.48
RAB5C-206ENST00000550406 ZNF468Q5VIY5 522 aaPredicted RBP12.08□□□□□ -0.48
RAB5C-206ENST00000550406 IGFL2Q6UWQ7 119 aa12.08□□□□□ -0.48
RAB5C-206ENST00000550406 LYPD8Q6UX82 237 aa12.08□□□□□ -0.48
RAB5C-206ENST00000550406 MSANTD1Q6ZTZ1 278 aa12.08□□□□□ -0.48
RAB5C-206ENST00000550406 WDR53Q7Z5U6 358 aaPredicted RBP12.08□□□□□ -0.48
RAB5C-206ENST00000550406 RETREG3Q86VR2 466 aa12.08□□□□□ -0.48
RAB5C-206ENST00000550406 TREML1Q86YW5 311 aa12.08□□□□□ -0.48
RAB5C-206ENST00000550406 NUP43Q8NFH3 380 aa12.08□□□□□ -0.48
RAB5C-206ENST00000550406 OR4A15Q8NGL6 344 aa12.08□□□□□ -0.48
RAB5C-206ENST00000550406 NUBPLQ8TB37 319 aa12.08□□□□□ -0.48
RAB5C-206ENST00000550406 GTF2H4Q92759 462 aa12.08□□□□□ -0.48
RAB5C-206ENST00000550406 HOXB13Q92826 284 aaPredicted RBP12.08□□□□□ -0.48
RAB5C-206ENST00000550406 ABHD17AQ96GS6 310 aa12.08□□□□□ -0.48
RAB5C-206ENST00000550406 VSTM2LQ96N03 204 aa12.08□□□□□ -0.48
RAB5C-206ENST00000550406 LMF1Q96S06 567 aa12.08□□□□□ -0.48
RAB5C-206ENST00000550406 SLC25A23Q9BV35 468 aa12.08□□□□□ -0.48
RAB5C-206ENST00000550406 ITPAQ9BY32 194 aa12.08□□□□□ -0.48
RAB5C-206ENST00000550406 FOLH1BQ9HBA9 442 aa12.08□□□□□ -0.48
RAB5C-206ENST00000550406 SLAMF8Q9P0V8 285 aa12.08□□□□□ -0.48
RAB5C-206ENST00000550406 MYOTQ9UBF9 498 aa12.08□□□□□ -0.48
RAB5C-206ENST00000550406 ARL2BPQ9Y2Y0 163 aa12.08□□□□□ -0.48
RAB5C-206ENST00000550406 CACNA1GO43497 2377 aa12.08□□□□□ -0.48
RAB5C-206ENST00000550406 CCDC154A6NI56 674 aa12.07□□□□□ -0.48
RAB5C-206ENST00000550406 FBP2O00757 339 aa12.07□□□□□ -0.48
RAB5C-206ENST00000550406 PRAMEF2O60811 474 aa12.07□□□□□ -0.48
RAB5C-206ENST00000550406 BCAS2O75934 225 aaPredicted RBP12.07□□□□□ -0.48
RAB5C-206ENST00000550406 OR2J2O76002 312 aa12.07□□□□□ -0.48
RAB5C-206ENST00000550406 CT45A8P0DMV1 189 aa12.07□□□□□ -0.48
RAB5C-206ENST00000550406 CT45A9P0DMV2 189 aa12.07□□□□□ -0.48
RAB5C-206ENST00000550406 KCNK10P57789 538 aa12.07□□□□□ -0.48
RAB5C-206ENST00000550406 AP2B1P63010 937 aa12.07□□□□□ -0.48
RAB5C-206ENST00000550406 KCNAB2Q13303 367 aa12.07□□□□□ -0.48
RAB5C-206ENST00000550406 MFAP5Q13361 173 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms