RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 PRKAA2P54646 552 aa14.99□□□□□ -0.01
VPS29-207ENST00000549970 TRA2BP62995 288 aaKnown RBP14.99□□□□□ -0.01
VPS29-207ENST00000549970 DUSP2Q05923 314 aa14.99□□□□□ -0.01
VPS29-207ENST00000549970 MGAT2Q10469 447 aa14.99□□□□□ -0.01
VPS29-207ENST00000549970 CSTF3Q12996 717 aaKnown RBP14.99□□□□□ -0.01
VPS29-207ENST00000549970 EXOSC7Q15024 291 aaKnown RBP14.99□□□□□ -0.01
VPS29-207ENST00000549970 TBCELQ5QJ74 424 aa14.99□□□□□ -0.01
VPS29-207ENST00000549970 TMEM198Q66K66 360 aa14.99□□□□□ -0.01
VPS29-207ENST00000549970 RTL6Q6ICC9 239 aa14.99□□□□□ -0.01
VPS29-207ENST00000549970 LIX1Q8N485 282 aa14.99□□□□□ -0.01
VPS29-207ENST00000549970 SPPL2AQ8TCT8 520 aa14.99□□□□□ -0.01
VPS29-207ENST00000549970 MZB1Q8WU39 189 aa14.99□□□□□ -0.01
VPS29-207ENST00000549970 LURAP1Q96LR2 239 aa14.99□□□□□ -0.01
VPS29-207ENST00000549970 RILPQ96NA2 401 aa14.99□□□□□ -0.01
VPS29-207ENST00000549970 KCNA7Q96RP8 456 aa14.99□□□□□ -0.01
VPS29-207ENST00000549970 TTYH2Q9BSA4 534 aa14.99□□□□□ -0.01
VPS29-207ENST00000549970 ACPTQ9BZG2 426 aa14.99□□□□□ -0.01
VPS29-207ENST00000549970 NXF5Q9H1B4 397 aaKnown RBP14.99□□□□□ -0.01
VPS29-207ENST00000549970 KCNJ16Q9NPI9 418 aa14.99□□□□□ -0.01
VPS29-207ENST00000549970 PFDN4Q9NQP4 134 aa14.99□□□□□ -0.01
VPS29-207ENST00000549970 QPCTLQ9NXS2 382 aa14.99□□□□□ -0.01
VPS29-207ENST00000549970 HEY2Q9UBP5 337 aa14.99□□□□□ -0.01
VPS29-207ENST00000549970 FETUBQ9UGM5 382 aa14.99□□□□□ -0.01
VPS29-207ENST00000549970 MCM8Q9UJA3 840 aa14.99□□□□□ -0.01
VPS29-207ENST00000549970 PSME2Q9UL46 239 aa14.99□□□□□ -0.01
VPS29-207ENST00000549970 ZNF780BQ9Y6R6 833 aa14.99□□□□□ -0.01
VPS29-207ENST00000549970 EXPH5Q8NEV8 1989 aa14.98□□□□□ -0.01
VPS29-207ENST00000549970 PCDH7O60245 1069 aa14.98□□□□□ -0.01
VPS29-207ENST00000549970 WDR1O75083 606 aa14.98□□□□□ -0.01
VPS29-207ENST00000549970 TRIM3O75382 744 aaPredicted RBP14.98□□□□□ -0.01
VPS29-207ENST00000549970 GSTA1P08263 222 aa14.98□□□□□ -0.01
VPS29-207ENST00000549970 GLI4P10075 376 aa14.98□□□□□ -0.01
VPS29-207ENST00000549970 ABCD3P28288 659 aa14.98□□□□□ -0.01
VPS29-207ENST00000549970 SSTR2P30874 369 aa14.98□□□□□ -0.01
VPS29-207ENST00000549970 MASP1P48740 699 aa14.98□□□□□ -0.01
VPS29-207ENST00000549970 HMGCS1Q01581 520 aa14.98□□□□□ -0.01
VPS29-207ENST00000549970 MAP4K2Q12851 820 aa14.98□□□□□ -0.01
VPS29-207ENST00000549970 LCP2Q13094 533 aa14.98□□□□□ -0.01
VPS29-207ENST00000549970 DUSP8Q13202 625 aa14.98□□□□□ -0.01
VPS29-207ENST00000549970 LTB4RQ15722 352 aa14.98□□□□□ -0.01
VPS29-207ENST00000549970 C1orf185Q5T7R7 199 aa14.98□□□□□ -0.01
VPS29-207ENST00000549970 SIMC1Q8NDZ2 872 aa14.98□□□□□ -0.01
VPS29-207ENST00000549970 C17orf47Q8NEP4 570 aa14.98□□□□□ -0.01
VPS29-207ENST00000549970 CHTF18Q8WVB6 975 aa14.98□□□□□ -0.01
VPS29-207ENST00000549970 TRIM44Q96DX7 344 aaPredicted RBP14.98□□□□□ -0.01
VPS29-207ENST00000549970 L3HYPDHQ96EM0 354 aa14.98□□□□□ -0.01
VPS29-207ENST00000549970 CNRIP1Q96F85 164 aaPredicted RBP14.98□□□□□ -0.01
VPS29-207ENST00000549970 APIPQ96GX9 242 aa14.98□□□□□ -0.01
VPS29-207ENST00000549970 ITPAQ9BY32 194 aa14.98□□□□□ -0.01
VPS29-207ENST00000549970 ACKR4Q9NPB9 350 aa14.98□□□□□ -0.01
VPS29-207ENST00000549970 UTS2RQ9UKP6 389 aa14.98□□□□□ -0.01
VPS29-207ENST00000549970 CFL2Q9Y281 166 aa14.98□□□□□ -0.01
VPS29-207ENST00000549970 DLGAP4Q9Y2H0 992 aa14.98□□□□□ -0.01
VPS29-207ENST00000549970 STK38LQ9Y2H1 464 aa14.98□□□□□ -0.01
VPS29-207ENST00000549970 PLLPQ9Y342 182 aa14.98□□□□□ -0.01
VPS29-207ENST00000549970 TIMM22Q9Y584 194 aa14.98□□□□□ -0.01
VPS29-207ENST00000549970 HCFC1P51610 2035 aa14.98□□□□□ -0.01
VPS29-207ENST00000549970 A0A0G2JNJ9 132 aa14.97□□□□□ -0.01
VPS29-207ENST00000549970 GNG14A0A1W2PPG7 69 aa14.97□□□□□ -0.01
VPS29-207ENST00000549970 A0A1W2PPM1 405 aa14.97□□□□□ -0.01
VPS29-207ENST00000549970 ANKRD33BA6NCL7 494 aa14.97□□□□□ -0.01
VPS29-207ENST00000549970 FOXO6A8MYZ6 492 aa14.97□□□□□ -0.01
VPS29-207ENST00000549970 TRAPPC6AO75865 159 aa14.97□□□□□ -0.01
VPS29-207ENST00000549970 TOXO94900 526 aa14.97□□□□□ -0.01
VPS29-207ENST00000549970 CBX7O95931 251 aa14.97□□□□□ -0.01
VPS29-207ENST00000549970 ENO1P06733 434 aaKnown RBP14.97□□□□□ -0.01
VPS29-207ENST00000549970 IL3P08700 152 aa14.97□□□□□ -0.01
VPS29-207ENST00000549970 PCSK2P16519 638 aa14.97□□□□□ -0.01
VPS29-207ENST00000549970 CASP3P42574 277 aa14.97□□□□□ -0.01
VPS29-207ENST00000549970 PKNOX1P55347 436 aa14.97□□□□□ -0.01
VPS29-207ENST00000549970 RPP38P78345 283 aaKnown RBP14.97□□□□□ -0.01
VPS29-207ENST00000549970 RAE1P78406 368 aaKnown RBP14.97□□□□□ -0.01
VPS29-207ENST00000549970 MRPS35P82673 323 aaKnown RBP14.97□□□□□ -0.01
VPS29-207ENST00000549970 TFF3Q07654 80 aa14.97□□□□□ -0.01
VPS29-207ENST00000549970 TRMT12Q53H54 448 aaKnown RBP14.97□□□□□ -0.01
VPS29-207ENST00000549970 SCIMPQ6UWF3 145 aa14.97□□□□□ -0.01
VPS29-207ENST00000549970 PACS2Q86VP3 889 aa14.97□□□□□ -0.01
VPS29-207ENST00000549970 CCNYL1Q8N7R7 359 aa14.97□□□□□ -0.01
VPS29-207ENST00000549970 GBP7Q8N8V2 638 aaPredicted RBP14.97□□□□□ -0.01
VPS29-207ENST00000549970 ACBD4Q8NC06 268 aa14.97□□□□□ -0.01
VPS29-207ENST00000549970 OR52R1Q8NGF1 315 aa14.97□□□□□ -0.01
VPS29-207ENST00000549970 NEIL3Q8TAT5 605 aa14.97□□□□□ -0.01
VPS29-207ENST00000549970 EXOSC8Q96B26 276 aaKnown RBP14.97□□□□□ -0.01
VPS29-207ENST00000549970 ZNF681Q96N22 645 aa14.97□□□□□ -0.01
VPS29-207ENST00000549970 SECISBP2Q96T21 854 aaKnown RBP14.97□□□□□ -0.01
VPS29-207ENST00000549970 GSTO2Q9H4Y5 243 aa14.97□□□□□ -0.01
VPS29-207ENST00000549970 NPDC1Q9NQX5 325 aaPredicted RBP14.97□□□□□ -0.01
VPS29-207ENST00000549970 Q9UFV3 132 aa14.97□□□□□ -0.01
VPS29-207ENST00000549970 DCDC2Q9UHG0 476 aa14.97□□□□□ -0.01
VPS29-207ENST00000549970 ZNF639Q9UID6 485 aa14.97□□□□□ -0.01
VPS29-207ENST00000549970 EMCNQ9ULC0 261 aa14.97□□□□□ -0.01
VPS29-207ENST00000549970 PDZD2O15018 2839 aa14.96□□□□□ -0.01
VPS29-207ENST00000549970 C15orf38-AP3S2A0A0A6YYH1 394 aa14.96□□□□□ -0.01
VPS29-207ENST00000549970 GLRA3O75311 464 aa14.96□□□□□ -0.01
VPS29-207ENST00000549970 PPM1BO75688 479 aa14.96□□□□□ -0.01
VPS29-207ENST00000549970 SNX4O95219 450 aa14.96□□□□□ -0.01
VPS29-207ENST00000549970 TACC2O95359 2948 aa14.96□□□□□ -0.01
VPS29-207ENST00000549970 SHBGP04278 402 aa14.96□□□□□ -0.01
VPS29-207ENST00000549970 ABCB1P08183 1280 aaPredicted RBP14.96□□□□□ -0.01
VPS29-207ENST00000549970 MYL2P10916 166 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms