RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 CXCL10P02778 98 aa13.35□□□□□ -0.27
RAPGEF3-218ENST00000548919 ALPPP05187 535 aa13.35□□□□□ -0.27
RAPGEF3-218ENST00000548919 PCBP4P57723 403 aaKnown RBP13.35□□□□□ -0.27
RAPGEF3-218ENST00000548919 DEFB103AP81534 67 aa13.35□□□□□ -0.27
RAPGEF3-218ENST00000548919 PLK5Q496M5 336 aa13.35□□□□□ -0.27
RAPGEF3-218ENST00000548919 ZNF628Q5EBL2 1059 aa13.35□□□□□ -0.27
RAPGEF3-218ENST00000548919 CLEC12AQ5QGZ9 265 aa13.35□□□□□ -0.27
RAPGEF3-218ENST00000548919 RNLSQ5VYX0 342 aa13.35□□□□□ -0.27
RAPGEF3-218ENST00000548919 LYPD8Q6UX82 237 aa13.35□□□□□ -0.27
RAPGEF3-218ENST00000548919 CADM2Q8N3J6 435 aa13.35□□□□□ -0.27
RAPGEF3-218ENST00000548919 TBC1D19Q8N5T2 526 aa13.35□□□□□ -0.27
RAPGEF3-218ENST00000548919 GALNT6Q8NCL4 622 aa13.35□□□□□ -0.27
RAPGEF3-218ENST00000548919 DTD2Q96FN9 168 aa13.35□□□□□ -0.27
RAPGEF3-218ENST00000548919 ANKRA2Q9H9E1 313 aa13.35□□□□□ -0.27
RAPGEF3-218ENST00000548919 NUP210Q8TEM1 1887 aaPredicted RBP13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 A0A1W2PRQ8 180 aa13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 TSPAN11A1L157 253 aa13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 NOTOA8MTQ0 251 aa13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 H7BY64 318 aa13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 SPINT1O43278 529 aa13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 PI15O43692 258 aa13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 LALBAP00709 142 aa13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 NR2F6P10588 404 aa13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 ACADLP28330 430 aa13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 NNMTP40261 264 aa13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 GPR1P46091 355 aa13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 QPRTQ15274 297 aa13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 TEAD2Q15562 447 aa13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 TATDN3Q17R31 274 aa13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 CCDC58Q4VC31 144 aa13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 YIF1BQ5BJH7 314 aa13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 CNIH2Q6PI25 160 aa13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 ZNF730Q6ZMV8 503 aa13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 KRT78Q8N1N4 520 aa13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 FGF11Q92914 225 aa13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 UBE2E3Q969T4 207 aa13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 PRAP1Q96NZ9 151 aa13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 B3GAT2Q9NPZ5 323 aa13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 RPRD1BQ9NQG5 326 aaKnown RBP13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 AHSPQ9NZD4 102 aa13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 SLC30A4O14863 429 aa13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 FRS3O43559 492 aa13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 CH25HO95992 272 aa13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 CCNYL3P0C7X3 344 aa13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 SLC2A2P11168 524 aaPredicted RBP13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 BUD31P41223 144 aaPredicted RBP13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 CDK5Q00535 292 aa13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 SYCE2Q6PIF2 218 aa13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 HSDL2Q6YN16 418 aa13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 Q8N402 240 aa13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 YIPF7Q8N8F6 280 aa13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 MORN4Q8NDC4 146 aa13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 ZBED6CLQ96FA7 236 aaPredicted RBP13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 TMED9Q9BVK6 235 aa13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 HDHD5Q9BXW7 423 aa13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 NEUROD4Q9HD90 331 aa13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 CNIH4Q9P003 139 aa13.34□□□□□ -0.27
RAPGEF3-218ENST00000548919 SMLR1H3BR10 107 aa13.33□□□□□ -0.27
RAPGEF3-218ENST00000548919 CASKO14936 926 aa13.33□□□□□ -0.27
RAPGEF3-218ENST00000548919 SERPIND1P05546 499 aa13.33□□□□□ -0.27
RAPGEF3-218ENST00000548919 TRAPPC2P0DI81 140 aa13.33□□□□□ -0.27
RAPGEF3-218ENST00000548919 TRAPPC2BP0DI82 140 aa13.33□□□□□ -0.27
RAPGEF3-218ENST00000548919 SLC6A11P48066 632 aa13.33□□□□□ -0.27
RAPGEF3-218ENST00000548919 EFNB1P98172 346 aa13.33□□□□□ -0.27
RAPGEF3-218ENST00000548919 EFR3AQ14156 821 aa13.33□□□□□ -0.27
RAPGEF3-218ENST00000548919 GPR19Q15760 415 aa13.33□□□□□ -0.27
RAPGEF3-218ENST00000548919 PRR23CQ6ZRP0 262 aa13.33□□□□□ -0.27
RAPGEF3-218ENST00000548919 QSOX2Q6ZRP7 698 aa13.33□□□□□ -0.27
RAPGEF3-218ENST00000548919 IL17RCQ8NAC3 791 aa13.33□□□□□ -0.27
RAPGEF3-218ENST00000548919 OR8D4Q8NGM9 314 aa13.33□□□□□ -0.27
RAPGEF3-218ENST00000548919 COQ10AQ96MF6 247 aa13.33□□□□□ -0.27
RAPGEF3-218ENST00000548919 MS4A8Q9BY19 250 aa13.33□□□□□ -0.27
RAPGEF3-218ENST00000548919 TBC1D17Q9HA65 648 aa13.33□□□□□ -0.27
RAPGEF3-218ENST00000548919 P2RX2Q9UBL9 471 aa13.33□□□□□ -0.27
RAPGEF3-218ENST00000548919 SHISA3A0PJX4 238 aa13.33□□□□□ -0.28
RAPGEF3-218ENST00000548919 LIMS3P0CW19 117 aa13.33□□□□□ -0.28
RAPGEF3-218ENST00000548919 LIMS4P0CW20 117 aa13.33□□□□□ -0.28
RAPGEF3-218ENST00000548919 SMIM11AP58511 58 aa13.33□□□□□ -0.28
RAPGEF3-218ENST00000548919 ALDH6A1Q02252 535 aaKnown RBP13.33□□□□□ -0.28
RAPGEF3-218ENST00000548919 CAMK2BQ13554 666 aa13.33□□□□□ -0.28
RAPGEF3-218ENST00000548919 C3orf38Q5JPI3 329 aa13.33□□□□□ -0.28
RAPGEF3-218ENST00000548919 LCN1P1Q5VSP4 162 aa13.33□□□□□ -0.28
RAPGEF3-218ENST00000548919 PLET1Q6UQ28 207 aa13.33□□□□□ -0.28
RAPGEF3-218ENST00000548919 KLK6Q92876 244 aa13.33□□□□□ -0.28
RAPGEF3-218ENST00000548919 UFD1Q92890 307 aa13.33□□□□□ -0.28
RAPGEF3-218ENST00000548919 MACROD1Q9BQ69 325 aa13.33□□□□□ -0.28
RAPGEF3-218ENST00000548919 SAP130Q9H0E3 1048 aa13.33□□□□□ -0.28
RAPGEF3-218ENST00000548919 TMEM245Q9H330 911 aa13.33□□□□□ -0.28
RAPGEF3-218ENST00000548919 SAGE1Q9NXZ1 904 aa13.33□□□□□ -0.28
RAPGEF3-218ENST00000548919 NLKQ9UBE8 527 aa13.33□□□□□ -0.28
RAPGEF3-218ENST00000548919 ALG5Q9Y673 324 aa13.33□□□□□ -0.28
RAPGEF3-218ENST00000548919 XIRP2A4UGR9 3374 aa13.33□□□□□ -0.28
RAPGEF3-218ENST00000548919 HEATR5BQ9P2D3 2071 aa13.33□□□□□ -0.28
RAPGEF3-218ENST00000548919 ERVH48-1M5A8F1 160 aa13.32□□□□□ -0.28
RAPGEF3-218ENST00000548919 DVL2O14641 736 aa13.32□□□□□ -0.28
RAPGEF3-218ENST00000548919 SEC14L5O43304 696 aa13.32□□□□□ -0.28
RAPGEF3-218ENST00000548919 LILRB3O75022 631 aa13.32□□□□□ -0.28
RAPGEF3-218ENST00000548919 ALX3O95076 343 aa13.32□□□□□ -0.28
RAPGEF3-218ENST00000548919 CHRM4P08173 479 aa13.32□□□□□ -0.28
RAPGEF3-218ENST00000548919 ACP2P11117 423 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms