RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 FBXL4Q9UKA2 621 aa11.26□□□□□ -0.61
HDAC7-226ENST00000547259 PCNX1Q96RV3 2341 aa11.25□□□□□ -0.61
HDAC7-226ENST00000547259 IGKV3D-11A0A0A0MRZ8 115 aa11.25□□□□□ -0.61
HDAC7-226ENST00000547259 A0A1W2PS29 197 aa11.25□□□□□ -0.61
HDAC7-226ENST00000547259 CCDC154A6NI56 674 aa11.25□□□□□ -0.61
HDAC7-226ENST00000547259 PCDH17O14917 1159 aa11.25□□□□□ -0.61
HDAC7-226ENST00000547259 CFLARO15519 480 aa11.25□□□□□ -0.61
HDAC7-226ENST00000547259 LRRTM2O43300 516 aa11.25□□□□□ -0.61
HDAC7-226ENST00000547259 IFNA16P05015 189 aa11.25□□□□□ -0.61
HDAC7-226ENST00000547259 IL6P05231 212 aa11.25□□□□□ -0.61
HDAC7-226ENST00000547259 PGRP06401 933 aa11.25□□□□□ -0.61
HDAC7-226ENST00000547259 CPMP14384 443 aa11.25□□□□□ -0.61
HDAC7-226ENST00000547259 CSNK2A2P19784 350 aaPredicted RBP11.25□□□□□ -0.61
HDAC7-226ENST00000547259 EFNA1P20827 205 aaPredicted RBP11.25□□□□□ -0.61
HDAC7-226ENST00000547259 ELAVL4P26378 380 aaKnown RBP11.25□□□□□ -0.61
HDAC7-226ENST00000547259 FEN1P39748 380 aaKnown RBP11.25□□□□□ -0.61
HDAC7-226ENST00000547259 ZFP36L2P47974 494 aaKnown RBP11.25□□□□□ -0.61
HDAC7-226ENST00000547259 NCBP2P52298 156 aaKnown RBP eCLIP11.25□□□□□ -0.61
HDAC7-226ENST00000547259 EFNA3P52797 238 aa11.25□□□□□ -0.61
HDAC7-226ENST00000547259 DGKQP52824 942 aa11.25□□□□□ -0.61
HDAC7-226ENST00000547259 AP2B1P63010 937 aa11.25□□□□□ -0.61
HDAC7-226ENST00000547259 IGLV3-21P80748 117 aaPredicted RBP11.25□□□□□ -0.61
HDAC7-226ENST00000547259 SERTAD2Q14140 314 aa11.25□□□□□ -0.61
HDAC7-226ENST00000547259 RCAN2Q14206 197 aa11.25□□□□□ -0.61
HDAC7-226ENST00000547259 ZNF750Q32MQ0 723 aa11.25□□□□□ -0.61
HDAC7-226ENST00000547259 C6orf163Q5TEZ5 329 aa11.25□□□□□ -0.61
HDAC7-226ENST00000547259 FAM180AQ6UWF9 173 aa11.25□□□□□ -0.61
HDAC7-226ENST00000547259 ISLR2Q6UXK2 745 aa11.25□□□□□ -0.61
HDAC7-226ENST00000547259 LANCL3Q6ZV70 420 aa11.25□□□□□ -0.61
HDAC7-226ENST00000547259 FUNDC1Q8IVP5 155 aa11.25□□□□□ -0.61
HDAC7-226ENST00000547259 TMEM151BQ8IW70 566 aa11.25□□□□□ -0.61
HDAC7-226ENST00000547259 NATD1Q8N6N6 113 aa11.25□□□□□ -0.61
HDAC7-226ENST00000547259 PLPP5Q8NEB5 264 aa11.25□□□□□ -0.61
HDAC7-226ENST00000547259 VPS37AQ8NEZ2 397 aa11.25□□□□□ -0.61
HDAC7-226ENST00000547259 OR8J2Q8NGG1 315 aa11.25□□□□□ -0.61
HDAC7-226ENST00000547259 COQ8BQ96D53 544 aa11.25□□□□□ -0.61
HDAC7-226ENST00000547259 ERP27Q96DN0 273 aa11.25□□□□□ -0.61
HDAC7-226ENST00000547259 SPDL1Q96EA4 605 aa11.25□□□□□ -0.61
HDAC7-226ENST00000547259 ZBED6CLQ96FA7 236 aaPredicted RBP11.25□□□□□ -0.61
HDAC7-226ENST00000547259 DGAT2Q96PD7 388 aa11.25□□□□□ -0.61
HDAC7-226ENST00000547259 OR52E6Q96RD3 313 aa11.25□□□□□ -0.61
HDAC7-226ENST00000547259 PELOQ9BRX2 385 aaKnown RBP11.25□□□□□ -0.61
HDAC7-226ENST00000547259 CCDC106Q9BWC9 280 aa11.25□□□□□ -0.61
HDAC7-226ENST00000547259 ALOXE3Q9BYJ1 711 aa11.25□□□□□ -0.61
HDAC7-226ENST00000547259 PNO1Q9NRX1 252 aaKnown RBP11.25□□□□□ -0.61
HDAC7-226ENST00000547259 FAM120CQ9NX05 1096 aaKnown RBP11.25□□□□□ -0.61
HDAC7-226ENST00000547259 TAS2R7Q9NYW3 318 aa11.25□□□□□ -0.61
HDAC7-226ENST00000547259 PKDREJQ9NTG1 2253 aa11.24□□□□□ -0.61
HDAC7-226ENST00000547259 TCRBV16S1A1N1A0A5B0 115 aa11.24□□□□□ -0.61
HDAC7-226ENST00000547259 MYO1GB0I1T2 1018 aa11.24□□□□□ -0.61
HDAC7-226ENST00000547259 SNRPB2P08579 225 aaKnown RBP11.24□□□□□ -0.61
HDAC7-226ENST00000547259 SLC35E2P0CK97 266 aa11.24□□□□□ -0.61
HDAC7-226ENST00000547259 PORP16435 677 aaPredicted RBP11.24□□□□□ -0.61
HDAC7-226ENST00000547259 TNNI3P19429 210 aa11.24□□□□□ -0.61
HDAC7-226ENST00000547259 CAPN3P20807 821 aa11.24□□□□□ -0.61
HDAC7-226ENST00000547259 NT5EP21589 574 aa11.24□□□□□ -0.61
HDAC7-226ENST00000547259 MPIP34949 423 aa11.24□□□□□ -0.61
HDAC7-226ENST00000547259 GPC1P35052 558 aa11.24□□□□□ -0.61
HDAC7-226ENST00000547259 STT3AP46977 705 aa11.24□□□□□ -0.61
HDAC7-226ENST00000547259 OR4D2P58180 307 aa11.24□□□□□ -0.61
HDAC7-226ENST00000547259 EEF1A2Q05639 463 aaKnown RBP11.24□□□□□ -0.61
HDAC7-226ENST00000547259 DUSP2Q05923 314 aa11.24□□□□□ -0.61
HDAC7-226ENST00000547259 HSPB3Q12988 150 aa11.24□□□□□ -0.61
HDAC7-226ENST00000547259 BIKQ13323 160 aa11.24□□□□□ -0.61
HDAC7-226ENST00000547259 CEBPEQ15744 281 aa11.24□□□□□ -0.61
HDAC7-226ENST00000547259 INAQ16352 499 aa11.24□□□□□ -0.61
HDAC7-226ENST00000547259 MPEG1Q2M385 716 aa11.24□□□□□ -0.61
HDAC7-226ENST00000547259 ANXA8L1Q5VT79 327 aa11.24□□□□□ -0.61
HDAC7-226ENST00000547259 C1QL3Q5VWW1 255 aa11.24□□□□□ -0.61
HDAC7-226ENST00000547259 BLOC1S3Q6QNY0 202 aa11.24□□□□□ -0.61
HDAC7-226ENST00000547259 ANKRD37Q7Z713 158 aa11.24□□□□□ -0.61
HDAC7-226ENST00000547259 SNX32Q86XE0 403 aa11.24□□□□□ -0.61
HDAC7-226ENST00000547259 ST13P4Q8IZP2 240 aaPredicted RBP11.24□□□□□ -0.61
HDAC7-226ENST00000547259 BCORP1Q8N888 145 aa11.24□□□□□ -0.61
HDAC7-226ENST00000547259 GRHL3Q8TE85 626 aa11.24□□□□□ -0.61
HDAC7-226ENST00000547259 VPS33AQ96AX1 596 aa11.24□□□□□ -0.61
HDAC7-226ENST00000547259 ADAP2Q9NPF8 381 aa11.24□□□□□ -0.61
HDAC7-226ENST00000547259 OSGIN2Q9Y236 505 aa11.24□□□□□ -0.61
HDAC7-226ENST00000547259 CLDN16Q9Y5I7 305 aa11.24□□□□□ -0.61
HDAC7-226ENST00000547259 PCSK5Q92824 1860 aa11.23□□□□□ -0.61
HDAC7-226ENST00000547259 A0A1W2PRB8 838 aa11.23□□□□□ -0.61
HDAC7-226ENST00000547259 DYTNA2CJ06 578 aa11.23□□□□□ -0.61
HDAC7-226ENST00000547259 A8MUA0 341 aa11.23□□□□□ -0.61
HDAC7-226ENST00000547259 ANGPT2O15123 496 aa11.23□□□□□ -0.61
HDAC7-226ENST00000547259 CPSF4O95639 269 aaKnown RBP11.23□□□□□ -0.61
HDAC7-226ENST00000547259 C6orf47O95873 294 aa11.23□□□□□ -0.61
HDAC7-226ENST00000547259 ATP1B1P05026 303 aa11.23□□□□□ -0.61
HDAC7-226ENST00000547259 STSP08842 583 aa11.23□□□□□ -0.61
HDAC7-226ENST00000547259 CD1EP15812 388 aa11.23□□□□□ -0.61
HDAC7-226ENST00000547259 PTGER1P34995 402 aa11.23□□□□□ -0.61
HDAC7-226ENST00000547259 MANFP55145 182 aaKnown RBP11.23□□□□□ -0.61
HDAC7-226ENST00000547259 LRRC74AQ0VAA2 488 aa11.23□□□□□ -0.61
HDAC7-226ENST00000547259 MFAP5Q13361 173 aa11.23□□□□□ -0.61
HDAC7-226ENST00000547259 ELAVL1Q15717 326 aaKnown RBP11.23□□□□□ -0.61
HDAC7-226ENST00000547259 MAPKAPK3Q16644 382 aa11.23□□□□□ -0.61
HDAC7-226ENST00000547259 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.23□□□□□ -0.61
HDAC7-226ENST00000547259 VPS26BQ4G0F5 336 aa11.23□□□□□ -0.61
HDAC7-226ENST00000547259 SFT2D3Q587I9 215 aa11.23□□□□□ -0.61
HDAC7-226ENST00000547259 MTFR2Q6P444 385 aa11.23□□□□□ -0.61
HDAC7-226ENST00000547259 TMEM205Q6UW68 189 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms