RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 ITPAQ9BY32 194 aa13.1□□□□□ -0.31
TROAP-203ENST00000546735 ANGPTL4Q9BY76 406 aa13.1□□□□□ -0.31
TROAP-203ENST00000546735 MAT2BQ9NZL9 334 aa13.1□□□□□ -0.31
TROAP-203ENST00000546735 BCAP29Q9UHQ4 241 aa13.1□□□□□ -0.31
TROAP-203ENST00000546735 ZNF180Q9UJW8 692 aa13.1□□□□□ -0.31
TROAP-203ENST00000546735 C15orf41Q9Y2V0 281 aa13.1□□□□□ -0.31
TROAP-203ENST00000546735 CCDC168Q8NDH2 2452 aa13.1□□□□□ -0.31
TROAP-203ENST00000546735 A0A087WUV0 522 aaPredicted RBP13.09□□□□□ -0.31
TROAP-203ENST00000546735 C2orf72A6NCS6 295 aa13.09□□□□□ -0.31
TROAP-203ENST00000546735 NME6O75414 186 aaPredicted RBP13.09□□□□□ -0.31
TROAP-203ENST00000546735 ZWINTO95229 277 aa13.09□□□□□ -0.31
TROAP-203ENST00000546735 OTCP00480 354 aa13.09□□□□□ -0.31
TROAP-203ENST00000546735 HPNP05981 417 aa13.09□□□□□ -0.31
TROAP-203ENST00000546735 CHN1P15882 459 aa13.09□□□□□ -0.31
TROAP-203ENST00000546735 ALDH9A1P49189 494 aa13.09□□□□□ -0.31
TROAP-203ENST00000546735 TMED10P49755 219 aaKnown RBP13.09□□□□□ -0.31
TROAP-203ENST00000546735 CDK9P50750 372 aaKnown RBP13.09□□□□□ -0.31
TROAP-203ENST00000546735 TOMM20Q15388 145 aa13.09□□□□□ -0.31
TROAP-203ENST00000546735 SLC25A35Q3KQZ1 300 aa13.09□□□□□ -0.31
TROAP-203ENST00000546735 ACSF3Q4G176 576 aaPredicted RBP13.09□□□□□ -0.31
TROAP-203ENST00000546735 WIPI1Q5MNZ9 446 aaPredicted RBP13.09□□□□□ -0.31
TROAP-203ENST00000546735 ARSKQ6UWY0 536 aa13.09□□□□□ -0.31
TROAP-203ENST00000546735 PACS2Q86VP3 889 aa13.09□□□□□ -0.31
TROAP-203ENST00000546735 ZZZ3Q8IYH5 903 aa13.09□□□□□ -0.31
TROAP-203ENST00000546735 CDYL2Q8N8U2 506 aa13.09□□□□□ -0.31
TROAP-203ENST00000546735 RELL2Q8NC24 303 aaPredicted RBP13.09□□□□□ -0.31
TROAP-203ENST00000546735 KLHL29Q96CT2 875 aa13.09□□□□□ -0.31
TROAP-203ENST00000546735 NODALQ96S42 347 aa13.09□□□□□ -0.31
TROAP-203ENST00000546735 SECISBP2Q96T21 854 aaKnown RBP13.09□□□□□ -0.31
TROAP-203ENST00000546735 UBQLN3Q9H347 655 aa13.09□□□□□ -0.31
TROAP-203ENST00000546735 EHD3Q9NZN3 535 aa13.09□□□□□ -0.31
TROAP-203ENST00000546735 TMEM216Q9P0N5 145 aa13.09□□□□□ -0.31
TROAP-203ENST00000546735 TRPS1Q9UHF7 1281 aa13.09□□□□□ -0.31
TROAP-203ENST00000546735 SNX6Q9UNH7 406 aa13.09□□□□□ -0.31
TROAP-203ENST00000546735 F8P00451 2351 aa13.09□□□□□ -0.31
TROAP-203ENST00000546735 INTS1Q8N201 2190 aaKnown RBP13.08□□□□□ -0.31
TROAP-203ENST00000546735 EXOC1LA0A1B0GW35 172 aa13.08□□□□□ -0.32
TROAP-203ENST00000546735 GOLGA6L10A6NI86 522 aa13.08□□□□□ -0.32
TROAP-203ENST00000546735 HSPB2A8KAH6 182 aa13.08□□□□□ -0.32
TROAP-203ENST00000546735 FAM47E-STBD1D6RA91 191 aa13.08□□□□□ -0.32
TROAP-203ENST00000546735 PPM1BO75688 479 aa13.08□□□□□ -0.32
TROAP-203ENST00000546735 SNX4O95219 450 aa13.08□□□□□ -0.32
TROAP-203ENST00000546735 CBX7O95931 251 aa13.08□□□□□ -0.32
TROAP-203ENST00000546735 ABCB1P08183 1280 aaPredicted RBP13.08□□□□□ -0.32
TROAP-203ENST00000546735 SNRPAP09012 282 aaKnown RBP13.08□□□□□ -0.32
TROAP-203ENST00000546735 KRT15P19012 456 aa13.08□□□□□ -0.32
TROAP-203ENST00000546735 CSNK2A2P19784 350 aaPredicted RBP13.08□□□□□ -0.32
TROAP-203ENST00000546735 BMP5P22003 454 aa13.08□□□□□ -0.32
TROAP-203ENST00000546735 CNTFP26441 200 aa13.08□□□□□ -0.32
TROAP-203ENST00000546735 GCAP28676 217 aa13.08□□□□□ -0.32
TROAP-203ENST00000546735 UQCRC1P31930 480 aa13.08□□□□□ -0.32
TROAP-203ENST00000546735 HSD17B3P37058 310 aa13.08□□□□□ -0.32
TROAP-203ENST00000546735 MRPS35P82673 323 aaKnown RBP13.08□□□□□ -0.32
TROAP-203ENST00000546735 CLCQ05315 142 aa13.08□□□□□ -0.32
TROAP-203ENST00000546735 MAP4K2Q12851 820 aa13.08□□□□□ -0.32
TROAP-203ENST00000546735 HSPB2Q16082 182 aa13.08□□□□□ -0.32
TROAP-203ENST00000546735 TRMT12Q53H54 448 aaKnown RBP13.08□□□□□ -0.32
TROAP-203ENST00000546735 UNC50Q53HI1 259 aa13.08□□□□□ -0.32
TROAP-203ENST00000546735 DCST1Q5T197 706 aa13.08□□□□□ -0.32
TROAP-203ENST00000546735 C10orf62Q5T681 223 aaPredicted RBP13.08□□□□□ -0.32
TROAP-203ENST00000546735 ANGPTL8Q6UXH0 198 aa13.08□□□□□ -0.32
TROAP-203ENST00000546735 MYRIPQ8NFW9 859 aa13.08□□□□□ -0.32
TROAP-203ENST00000546735 OR52R1Q8NGF1 315 aa13.08□□□□□ -0.32
TROAP-203ENST00000546735 HGDQ93099 445 aa13.08□□□□□ -0.32
TROAP-203ENST00000546735 CNRIP1Q96F85 164 aaPredicted RBP13.08□□□□□ -0.32
TROAP-203ENST00000546735 TMEM41AQ96HV5 264 aa13.08□□□□□ -0.32
TROAP-203ENST00000546735 C1QTNF3Q9BXJ4 246 aa13.08□□□□□ -0.32
TROAP-203ENST00000546735 TSPYL1Q9H0U9 437 aa13.08□□□□□ -0.32
TROAP-203ENST00000546735 METTL7AQ9H8H3 244 aa13.08□□□□□ -0.32
TROAP-203ENST00000546735 ANKRA2Q9H9E1 313 aa13.08□□□□□ -0.32
TROAP-203ENST00000546735 GALNT9Q9HCQ5 603 aa13.08□□□□□ -0.32
TROAP-203ENST00000546735 RYDENQ9NUL5 291 aaKnown RBP13.08□□□□□ -0.32
TROAP-203ENST00000546735 HEY2Q9UBP5 337 aa13.08□□□□□ -0.32
TROAP-203ENST00000546735 ZNF639Q9UID6 485 aa13.08□□□□□ -0.32
TROAP-203ENST00000546735 CAMK2AQ9UQM7 478 aa13.08□□□□□ -0.32
TROAP-203ENST00000546735 PLLPQ9Y342 182 aa13.08□□□□□ -0.32
TROAP-203ENST00000546735 PCDHGB3Q9Y5G1 929 aa13.08□□□□□ -0.32
TROAP-203ENST00000546735 NINQ8N4C6 2090 aa13.08□□□□□ -0.32
TROAP-203ENST00000546735 AHRRA9YTQ3 701 aa13.07□□□□□ -0.32
TROAP-203ENST00000546735 MANBAO00462 879 aa13.07□□□□□ -0.32
TROAP-203ENST00000546735 DLX3O60479 287 aa13.07□□□□□ -0.32
TROAP-203ENST00000546735 GUCY1B2O75343 617 aa13.07□□□□□ -0.32
TROAP-203ENST00000546735 SUPT7LO94864 414 aa13.07□□□□□ -0.32
TROAP-203ENST00000546735 ESRRBO95718 433 aa13.07□□□□□ -0.32
TROAP-203ENST00000546735 EPPINO95925 133 aa13.07□□□□□ -0.32
TROAP-203ENST00000546735 ATP1B1P05026 303 aa13.07□□□□□ -0.32
TROAP-203ENST00000546735 CTAGE8P0CG41 777 aa13.07□□□□□ -0.32
TROAP-203ENST00000546735 PCSK2P16519 638 aa13.07□□□□□ -0.32
TROAP-203ENST00000546735 BMP7P18075 431 aa13.07□□□□□ -0.32
TROAP-203ENST00000546735 PTPN6P29350 595 aa13.07□□□□□ -0.32
TROAP-203ENST00000546735 PTGDSP41222 190 aa13.07□□□□□ -0.32
TROAP-203ENST00000546735 HTR6P50406 440 aa13.07□□□□□ -0.32
TROAP-203ENST00000546735 AGFG1P52594 562 aaKnown RBP13.07□□□□□ -0.32
TROAP-203ENST00000546735 RPP38P78345 283 aaKnown RBP13.07□□□□□ -0.32
TROAP-203ENST00000546735 PLCXD2Q0VAA5 305 aa13.07□□□□□ -0.32
TROAP-203ENST00000546735 ZNF678Q5SXM1 525 aa13.07□□□□□ -0.32
TROAP-203ENST00000546735 TIGD3Q6B0B8 471 aa13.07□□□□□ -0.32
TROAP-203ENST00000546735 VASNQ6EMK4 673 aa13.07□□□□□ -0.32
TROAP-203ENST00000546735 YRDCQ86U90 279 aaKnown RBP13.07□□□□□ -0.32
TROAP-203ENST00000546735 CTAGE4Q8IX94 777 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms