RNA–Protein interactions for RNA: ENST00000545549.1

LINC01965-204, Transcript of long intergenic non-protein coding RNA 1965, humanhuman

TSL 4 BASIC

Gene LINC01965, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01965-204ENST00000545549 USP51Q70EK9 711 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 TUBA1AQ71U36 451 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 EIF3MQ7L2H7 374 aaKnown RBP3.41□□□□□ -1.86
LINC01965-204ENST00000545549 PAGE2Q7Z2X7 111 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 HSD11B1LQ7Z5J1 315 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 C11orf96Q7Z7L8 435 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 TSPAN33Q86UF1 283 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 TSPYL5Q86VY4 417 aaPredicted RBP3.41□□□□□ -1.86
LINC01965-204ENST00000545549 P2RY8Q86VZ1 359 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 THOC6Q86W42 341 aaKnown RBP3.41□□□□□ -1.86
LINC01965-204ENST00000545549 CACUL1Q86Y37 369 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 KRT73Q86Y46 540 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 NRROSQ86YC3 692 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 MCEMP1Q8IX19 187 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 RIMKLAQ8IXN7 391 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 SYTL1Q8IYJ3 562 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 PHACTR4Q8IZ21 702 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 NRSN1Q8IZ57 195 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 SDR16C5Q8N3Y7 309 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 STX19Q8N4C7 294 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 OXR1Q8N573 874 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 TRAM1L1Q8N609 369 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 CLDN19Q8N6F1 224 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 AMER2Q8N7J2 671 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 L3MBTL4Q8NA19 623 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 TTC29Q8NA56 475 aaPredicted RBP3.41□□□□□ -1.86
LINC01965-204ENST00000545549 SMYD1Q8NB12 490 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 PLA2G15Q8NCC3 412 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 C11orf65Q8NCR3 313 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 PIK3C3Q8NEB9 887 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 ZNF548Q8NEK5 533 aaPredicted RBP3.41□□□□□ -1.86
LINC01965-204ENST00000545549 KBTBD8Q8NFY9 601 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 OR4A15Q8NGL6 344 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 OR13F1Q8NGS4 319 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 OR4C6Q8NH72 309 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 C9orf43Q8TAL5 461 aaPredicted RBP3.41□□□□□ -1.86
LINC01965-204ENST00000545549 FNDC8Q8TC99 324 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 SPPL2AQ8TCT8 520 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 GIPC3Q8TF64 312 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 KCNE4Q8WWG9 221 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 OR1E3Q8WZA6 343 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 USP7Q93009 1102 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 SH3KBP1Q96B97 665 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 TBC1D20Q96BZ9 403 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 FBXL8Q96CD0 374 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 PPCDCQ96CD2 204 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 MTERF3Q96E29 417 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 OTUB1Q96FW1 271 aaPredicted RBP3.41□□□□□ -1.86
LINC01965-204ENST00000545549 CEP19Q96LK0 163 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 TEX37Q96LM6 180 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 APOLD1Q96LR9 279 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 Q96MT0 163 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 COG8Q96MW5 612 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 ZNF583Q96ND8 569 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 DACH2Q96NX9 599 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 TSSK3Q96PN8 268 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 TEFMQ96QE5 360 aaKnown RBP3.41□□□□□ -1.86
LINC01965-204ENST00000545549 HBEGFQ99075 208 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 EPYCQ99645 322 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 CCM2Q9BSQ5 444 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 DUSP26Q9BV47 211 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 SPATA5L1Q9BVQ7 753 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 BOCQ9BWV1 1114 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 DGCR6LQ9BY27 220 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 KRTAP4-6Q9BYQ5 205 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 NLNQ9BYT8 704 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 PRRG3Q9BZD7 231 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 DPH1Q9BZG8 443 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 TRIT1Q9H3H1 467 aaKnown RBP3.41□□□□□ -1.86
LINC01965-204ENST00000545549 TCEAL2Q9H3H9 227 aaPredicted RBP3.41□□□□□ -1.86
LINC01965-204ENST00000545549 GAREM1Q9H706 876 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 KAT8Q9H7Z6 458 aaKnown RBP3.41□□□□□ -1.86
LINC01965-204ENST00000545549 FGF22Q9HCT0 170 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 MIEF1Q9NQG6 463 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 NECTIN3Q9NQS3 549 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 TM7SF3Q9NS93 570 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 IRAK4Q9NWZ3 460 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 UCKL1Q9NWZ5 548 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 RHBDL2Q9NX52 303 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 THUMPD1Q9NXG2 353 aaKnown RBP3.41□□□□□ -1.86
LINC01965-204ENST00000545549 PDP1Q9P0J1 537 aaPredicted RBP3.41□□□□□ -1.86
LINC01965-204ENST00000545549 VAPAQ9P0L0 249 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 SH3BP4Q9P0V3 963 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 SPASTQ9UBP0 616 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 B4GALT6Q9UBX8 382 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 DAPK2Q9UIK4 370 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 BTNL2Q9UIR0 455 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 NCKAP1Q9Y2A7 1128 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 B3GNT3Q9Y2A9 372 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 SLC17A4Q9Y2C5 497 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 CA5BQ9Y2D0 317 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 POFUT2Q9Y2G5 429 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 WBP11Q9Y2W2 641 aaKnown RBP3.41□□□□□ -1.86
LINC01965-204ENST00000545549 PCDHGA1Q9Y5H4 931 aa3.41□□□□□ -1.86
LINC01965-204ENST00000545549 PCYT1BQ9Y5K3 369 aaPredicted RBP3.41□□□□□ -1.86
LINC01965-204ENST00000545549 ZNF106Q9H2Y7 1883 aaKnown RBP3.41□□□□□ -1.86
LINC01965-204ENST00000545549 TACC2O95359 2948 aa3.4□□□□□ -1.86
LINC01965-204ENST00000545549 RYR3Q15413 4870 aa3.4□□□□□ -1.86
LINC01965-204ENST00000545549 IGLV3-16A0A075B6K0 115 aa3.4□□□□□ -1.87
LINC01965-204ENST00000545549 TBC1D3DA0A087WVF3 549 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms