RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 BEND6Q5SZJ8 279 aaPredicted RBP6.22□□□□□ -1.41
LDHA-223ENST00000545215 KLHL35Q6PF15 583 aa6.22□□□□□ -1.41
LDHA-223ENST00000545215 OTOAQ7RTW8 1153 aa6.22□□□□□ -1.41
LDHA-223ENST00000545215 WDR53Q7Z5U6 358 aaPredicted RBP6.22□□□□□ -1.41
LDHA-223ENST00000545215 LCA5Q86VQ0 697 aa6.22□□□□□ -1.41
LDHA-223ENST00000545215 AMZ2Q86W34 360 aa6.22□□□□□ -1.41
LDHA-223ENST00000545215 ZC3HC1Q86WB0 502 aaKnown RBP6.22□□□□□ -1.41
LDHA-223ENST00000545215 DENND6AQ8IWF6 608 aa6.22□□□□□ -1.41
LDHA-223ENST00000545215 GSPT2Q8IYD1 628 aaKnown RBP6.22□□□□□ -1.41
LDHA-223ENST00000545215 RASGEF1AQ8N9B8 481 aa6.22□□□□□ -1.41
LDHA-223ENST00000545215 ATG16L2Q8NAA4 619 aa6.22□□□□□ -1.41
LDHA-223ENST00000545215 OR11G2Q8NGC1 345 aa6.22□□□□□ -1.41
LDHA-223ENST00000545215 OR2L2Q8NH16 312 aa6.22□□□□□ -1.41
LDHA-223ENST00000545215 OR1L3Q8NH93 324 aa6.22□□□□□ -1.41
LDHA-223ENST00000545215 HM13Q8TCT9 377 aa6.22□□□□□ -1.41
LDHA-223ENST00000545215 ASZ1Q8WWH4 475 aa6.22□□□□□ -1.41
LDHA-223ENST00000545215 RNASE6Q93091 150 aaKnown RBP6.22□□□□□ -1.41
LDHA-223ENST00000545215 LRRC46Q96FV0 321 aa6.22□□□□□ -1.41
LDHA-223ENST00000545215 GPR22Q99680 433 aa6.22□□□□□ -1.41
LDHA-223ENST00000545215 RBBP8Q99708 897 aa6.22□□□□□ -1.41
LDHA-223ENST00000545215 TTYH2Q9BSA4 534 aa6.22□□□□□ -1.41
LDHA-223ENST00000545215 CCM2Q9BSQ5 444 aa6.22□□□□□ -1.41
LDHA-223ENST00000545215 IQCGQ9H095 443 aaKnown RBP6.22□□□□□ -1.41
LDHA-223ENST00000545215 STMN4Q9H169 189 aaPredicted RBP6.22□□□□□ -1.41
LDHA-223ENST00000545215 VIPAS39Q9H9C1 493 aa6.22□□□□□ -1.41
LDHA-223ENST00000545215 SYTL2Q9HCH5 934 aa6.22□□□□□ -1.41
LDHA-223ENST00000545215 PSMC3IPQ9P2W1 217 aaPredicted RBP6.22□□□□□ -1.41
LDHA-223ENST00000545215 ACSL5Q9ULC5 683 aa6.22□□□□□ -1.41
LDHA-223ENST00000545215 WDR37Q9Y2I8 494 aa6.22□□□□□ -1.41
LDHA-223ENST00000545215 PMF1-BGLAPU3KQ54 211 aa6.22□□□□□ -1.41
LDHA-223ENST00000545215 ANKRD12Q6UB98 2062 aa6.21□□□□□ -1.41
LDHA-223ENST00000545215 A0A087WWL8 130 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 MBD3L3A6NE82 208 aaPredicted RBP6.21□□□□□ -1.42
LDHA-223ENST00000545215 OR2AG2A6NM03 316 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 GOLGA8KD6RF30 607 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 GOLGA8TH3BQL2 631 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 PIN1P1O15428 100 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 ATP8B1O43520 1251 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 POP7O75817 140 aaKnown RBP6.21□□□□□ -1.42
LDHA-223ENST00000545215 HAUS5O94927 633 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 ZBTB11O95625 1053 aaPredicted RBP6.21□□□□□ -1.42
LDHA-223ENST00000545215 RPN2P04844 631 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 SNRPAP09012 282 aaKnown RBP6.21□□□□□ -1.42
LDHA-223ENST00000545215 PRR35P0CG20 571 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 ZNF888P0CJ79 500 aaPredicted RBP6.21□□□□□ -1.42
LDHA-223ENST00000545215 RAP2AP10114 183 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 STMN1P16949 149 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 CHRM3P20309 590 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 CYP2A7P20853 494 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 PTGER1P34995 402 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 SERPINF1P36955 418 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 SERPINB8P50452 374 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 ATP5J2P56134 94 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 DCDP81605 110 aaKnown RBP6.21□□□□□ -1.42
LDHA-223ENST00000545215 RAB32Q13637 225 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 SEMA3AQ14563 771 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 RPE65Q16518 533 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 FBXL19-AS1Q494R0 122 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 SYTL3Q4VX76 610 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 TMEM220Q6QAJ8 160 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 TIFABQ6ZNK6 161 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 IL17RELQ6ZVW7 336 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 NEK10Q6ZWH5 1172 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 RNF44Q7L0R7 432 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 KBTBD2Q8IY47 623 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 SIRT6Q8N6T7 355 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 ANKRD53Q8N9V6 530 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 OR56A3Q8NH54 315 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 ACMSDQ8TDX5 336 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 MPP4Q96JB8 637 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 VPS50Q96JG6 964 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 CABS1Q96KC9 395 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 BIRC8Q96P09 236 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 DIRC2Q96SL1 478 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 PAFAH2Q99487 392 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 SLC7A5P2Q9GIP4 190 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 FAM96AQ9H5X1 160 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 FBXO6Q9NRD1 293 aaPredicted RBP6.21□□□□□ -1.42
LDHA-223ENST00000545215 IMP3Q9NV31 184 aaKnown RBP6.21□□□□□ -1.42
LDHA-223ENST00000545215 PSD3Q9NYI0 1048 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 JKAMPQ9P055 326 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 SENP1Q9P0U3 644 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 IFT80Q9P2H3 777 aaPredicted RBP6.21□□□□□ -1.42
LDHA-223ENST00000545215 TRMT6Q9UJA5 497 aaKnown RBP6.21□□□□□ -1.42
LDHA-223ENST00000545215 PSMD13Q9UNM6 376 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 CDYLQ9Y232 598 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 CRYL1Q9Y2S2 319 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 PCDHGB1Q9Y5G3 927 aa6.21□□□□□ -1.42
LDHA-223ENST00000545215 CMYA5Q8N3K9 4069 aa6.2□□□□□ -1.42
LDHA-223ENST00000545215 SCN2AQ99250 2005 aa6.2□□□□□ -1.42
LDHA-223ENST00000545215 A0A1B0GVC2 190 aa6.2□□□□□ -1.42
LDHA-223ENST00000545215 CXorf49A8MYA2 514 aaPredicted RBP6.2□□□□□ -1.42
LDHA-223ENST00000545215 POC1B-GALNT4F8VUJ3 575 aa6.2□□□□□ -1.42
LDHA-223ENST00000545215 ZNF749O43361 778 aa6.2□□□□□ -1.42
LDHA-223ENST00000545215 OR1I1O60431 355 aa6.2□□□□□ -1.42
LDHA-223ENST00000545215 LMX1BO60663 402 aa6.2□□□□□ -1.42
LDHA-223ENST00000545215 ONECUT2O95948 504 aa6.2□□□□□ -1.42
LDHA-223ENST00000545215 HPP00738 406 aa6.2□□□□□ -1.42
LDHA-223ENST00000545215 SP1P08047 785 aa6.2□□□□□ -1.42
LDHA-223ENST00000545215 MYZAPP0CAP1 466 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms