RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 PPP1R14AQ96A00 147 aa6.84□□□□□ -1.31
CPSF7-224ENST00000544990 PPWD1Q96BP3 646 aaKnown RBP6.84□□□□□ -1.31
CPSF7-224ENST00000544990 SCMH1Q96GD3 660 aa6.84□□□□□ -1.31
CPSF7-224ENST00000544990 PSMG3-AS1Q96PY0 264 aa6.84□□□□□ -1.31
CPSF7-224ENST00000544990 TAAR6Q96RI8 345 aa6.84□□□□□ -1.31
CPSF7-224ENST00000544990 HBEGFQ99075 208 aa6.84□□□□□ -1.31
CPSF7-224ENST00000544990 TRMOQ9BU70 441 aa6.84□□□□□ -1.31
CPSF7-224ENST00000544990 TMEM109Q9BVC6 243 aa6.84□□□□□ -1.31
CPSF7-224ENST00000544990 TRIM45Q9H8W5 580 aaPredicted RBP6.84□□□□□ -1.31
CPSF7-224ENST00000544990 RRAGDQ9NQL2 400 aaPredicted RBP6.84□□□□□ -1.31
CPSF7-224ENST00000544990 KLHL1Q9NR64 748 aa6.84□□□□□ -1.31
CPSF7-224ENST00000544990 TEX10Q9NXF1 929 aaPredicted RBP6.84□□□□□ -1.31
CPSF7-224ENST00000544990 SENP1Q9P0U3 644 aa6.84□□□□□ -1.31
CPSF7-224ENST00000544990 MYOTQ9UBF9 498 aa6.84□□□□□ -1.31
CPSF7-224ENST00000544990 PFDN2Q9UHV9 154 aa6.84□□□□□ -1.31
CPSF7-224ENST00000544990 MCM8Q9UJA3 840 aa6.84□□□□□ -1.31
CPSF7-224ENST00000544990 ZNF223Q9UK11 482 aaPredicted RBP6.84□□□□□ -1.31
CPSF7-224ENST00000544990 RAB21Q9UL25 225 aa6.84□□□□□ -1.31
CPSF7-224ENST00000544990 ERVK-11Q9UQG0 969 aa6.84□□□□□ -1.31
CPSF7-224ENST00000544990 KLF13Q9Y2Y9 288 aaPredicted RBP6.84□□□□□ -1.31
CPSF7-224ENST00000544990 TIMM22Q9Y584 194 aa6.84□□□□□ -1.31
CPSF7-224ENST00000544990 PCDHA9Q9Y5H5 950 aa6.84□□□□□ -1.31
CPSF7-224ENST00000544990 RP1L1Q8IWN7 2480 aaPredicted RBP6.83□□□□□ -1.32
CPSF7-224ENST00000544990 SVILO95425 2214 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 GNG14A0A1W2PPG7 69 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 OR6C76A6NM76 312 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 A8MVJ9 347 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 WWP2O00308 870 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 PGRMC2O15173 223 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 RGS16O15492 202 aaPredicted RBP6.83□□□□□ -1.32
CPSF7-224ENST00000544990 PCDH7O60245 1069 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 PRKNO60260 465 aaPredicted RBP6.83□□□□□ -1.32
CPSF7-224ENST00000544990 NME2P1O60361 137 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 SPAG7O75391 227 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 ERLIN1O75477 346 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 ERAL1O75616 437 aaKnown RBP6.83□□□□□ -1.32
CPSF7-224ENST00000544990 OR2J2O76002 312 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 CHEK2O96017 543 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 UROSP10746 265 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 PORP16435 677 aaPredicted RBP6.83□□□□□ -1.32
CPSF7-224ENST00000544990 GSTM5P46439 218 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 HTR6P50406 440 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 XKP51811 444 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 HK2P52789 917 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 ERVK-8P63133 956 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 ALDH6A1Q02252 535 aaKnown RBP6.83□□□□□ -1.32
CPSF7-224ENST00000544990 BTKQ06187 659 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 RBPJQ06330 500 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 GALNT1Q10472 559 aaPredicted RBP6.83□□□□□ -1.32
CPSF7-224ENST00000544990 ZNF267Q14586 743 aaPredicted RBP6.83□□□□□ -1.32
CPSF7-224ENST00000544990 HEPACAMQ14CZ8 416 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 MPEG1Q2M385 716 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 KRT71Q3SY84 523 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 SPDYAQ5MJ70 313 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 TCHHL1Q5QJ38 904 aaPredicted RBP6.83□□□□□ -1.32
CPSF7-224ENST00000544990 SFRP5Q5T4F7 317 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 ZNF324BQ6AW86 544 aaPredicted RBP6.83□□□□□ -1.32
CPSF7-224ENST00000544990 SLC48A1Q6P1K1 146 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 OPN5Q6U736 354 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 SEZ6L2Q6UXD5 910 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 IL20RBQ6UXL0 311 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 GFRALQ6UXV0 394 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 RNF111Q6ZNA4 994 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 SLC29A4Q7RTT9 530 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 C10orf107Q8IVU9 208 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 ZNF321PQ8N8H1 164 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 NUBPLQ8TB37 319 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 SLC22A8Q8TCC7 542 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 TCP10LQ8TDR4 215 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 TM4SF18Q96CE8 201 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 FBXL20Q96IG2 436 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 FAM111AQ96PZ2 611 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 KCNA7Q96RP8 456 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 RASL10BQ96S79 203 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 SLX1AQ9BQ83 275 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 CNPPD1Q9BV87 410 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 SSBP4Q9BWG4 385 aaPredicted RBP6.83□□□□□ -1.32
CPSF7-224ENST00000544990 ACPTQ9BZG2 426 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 C12orf65Q9H3J6 166 aaKnown RBP6.83□□□□□ -1.32
CPSF7-224ENST00000544990 LIN28AQ9H9Z2 209 aaKnown RBP6.83□□□□□ -1.32
CPSF7-224ENST00000544990 EML4Q9HC35 981 aaKnown RBP6.83□□□□□ -1.32
CPSF7-224ENST00000544990 HPF1Q9NWY4 346 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 SIRT5Q9NXA8 310 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 ERVK-19Q9WJR5 959 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 ZNF780BQ9Y6R6 833 aa6.83□□□□□ -1.32
CPSF7-224ENST00000544990 CLEC18AA5D8T8 446 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 ASPDHA6ND91 283 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 TMEM200CA6NKL6 621 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 WASHC1A8K0Z3 465 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 SLC28A1O00337 649 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 UBFD1O14562 309 aaKnown RBP6.82□□□□□ -1.32
CPSF7-224ENST00000544990 AZIN1O14977 448 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 CTIFO43310 598 aaKnown RBP6.82□□□□□ -1.32
CPSF7-224ENST00000544990 RGS14O43566 566 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 NPHS1O60500 1241 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 IGKV3-11P04433 115 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 ANXA4P09525 319 aaPredicted RBP6.82□□□□□ -1.32
CPSF7-224ENST00000544990 MYZAPP0CAP1 466 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 CPMP14384 443 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 CHN1P15882 459 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms