RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 A0A1W2PPM1 405 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 FRG2CA6NGY1 282 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 FOXO6A8MYZ6 492 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 C4orf51C9J302 202 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 G3V2L1 256 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 AZIN1O14977 448 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 PGRMC2O15173 223 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 BIRC5O15392 142 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 WDR1O75083 606 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 DNAJB6O75190 326 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 LYPLA1O75608 230 aaPredicted RBP5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 OR6B1O95007 311 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 ZWINTO95229 277 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 ETHE1O95571 254 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 CLDN1O95832 211 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 TBX6O95947 436 aaPredicted RBP5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 LDLRP01130 860 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 GBAP04062 536 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 TPOP07202 933 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 KRT16P08779 473 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 IFI6P09912 130 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 GCAP28676 217 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 ALDH3A1P30838 453 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 GPC1P35052 558 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 HPCAL1P37235 193 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 MAN2A2P49641 1150 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 NR0B1P51843 470 aaKnown RBP5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 HNRNPFP52597 415 aaKnown RBP5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 KCNK10P57789 538 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 VSNL1P62760 191 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 EEF1A1P68104 462 aaKnown RBP5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 BTKQ06187 659 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 C2orf80Q0P641 193 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 PLCXD2Q0VAA5 305 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 EBPQ15125 230 aaKnown RBP5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 NTRK2Q16620 822 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 DECR1Q16698 335 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 ATP6AP1LQ52LC2 224 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 WLSQ5T9L3 541 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 EEF1A1P5Q5VTE0 462 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 SLC30A6Q6NXT4 461 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 Q6ZPB1 254 aaPredicted RBP5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 NUP54Q7Z3B4 507 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 TRABD2AQ86V40 505 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 NUDCD3Q8IVD9 361 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 SPNS2Q8IVW8 549 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 C9orf40Q8IXQ3 194 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 DDIASQ8IXT1 998 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 GSPT2Q8IYD1 628 aaKnown RBP5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 C4orf33Q8N1A6 199 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 FAM109AQ8N4B1 249 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 CPSF7Q8N684 471 aaKnown RBP5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 TMEM52Q8NDY8 209 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 VPS37AQ8NEZ2 397 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 OR2M7Q8NG81 312 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 C16orf52Q8NHV5 167 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 CDC26Q8NHZ8 85 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 FAM57AQ8TBR7 257 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 ZNF675Q8TD23 568 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 EPS8L3Q8TE67 593 aaKnown RBP5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 PAQR8Q8TEZ7 354 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 AGAP11Q8TF27 550 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 CA5BP1Q8WTZ4 195 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 PHF10Q8WUB8 498 aaKnown RBP5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 RND1Q92730 232 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 DIO2Q92813 273 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 TM4SF18Q96CE8 201 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 MTERF3Q96E29 417 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 LCORQ96JN0 433 aaPredicted RBP5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 JSRP1Q96MG2 331 aaPredicted RBP5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 TAAR6Q96RI8 345 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 MESP1Q9BRJ9 268 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 SORBS1Q9BX66 1292 aaKnown RBP5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 PARD6BQ9BYG5 372 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 ACPTQ9BZG2 426 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 ANKZF1Q9H8Y5 726 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 LRTM1Q9HBL6 345 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 Q9N2J8 555 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 SLC35C2Q9NQQ7 365 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 DDX18Q9NVP1 670 aaKnown RBP5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 NKIRAS1Q9NYS0 192 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 TAS2R7Q9NYW3 318 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 KLRF1Q9NZS2 232 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 EDARQ9UNE0 448 aa5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 EIF3LQ9Y262 564 aaKnown RBP5.18□□□□□ -1.58
CLSTN3-215ENST00000544584 A0A087WV62 115 aa5.17□□□□□ -1.58
CLSTN3-215ENST00000544584 AHRRA9YTQ3 701 aa5.17□□□□□ -1.58
CLSTN3-215ENST00000544584 NPIPB8E9PQR5 432 aa5.17□□□□□ -1.58
CLSTN3-215ENST00000544584 LINC01387J3KSC0 135 aa5.17□□□□□ -1.58
CLSTN3-215ENST00000544584 PDPK1O15530 556 aa5.17□□□□□ -1.58
CLSTN3-215ENST00000544584 HNRNPRO43390 633 aaKnown RBP5.17□□□□□ -1.58
CLSTN3-215ENST00000544584 PLOD3O60568 738 aa5.17□□□□□ -1.58
CLSTN3-215ENST00000544584 SEMA7AO75326 666 aa5.17□□□□□ -1.58
CLSTN3-215ENST00000544584 REM1O75628 298 aa5.17□□□□□ -1.58
CLSTN3-215ENST00000544584 PPM1BO75688 479 aa5.17□□□□□ -1.58
CLSTN3-215ENST00000544584 CBR3O75828 277 aa5.17□□□□□ -1.58
CLSTN3-215ENST00000544584 KCNH1O95259 989 aa5.17□□□□□ -1.58
CLSTN3-215ENST00000544584 SHBGP04278 402 aa5.17□□□□□ -1.58
CLSTN3-215ENST00000544584 FGF4P08620 206 aa5.17□□□□□ -1.58
CLSTN3-215ENST00000544584 IL3P08700 152 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms