RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 NFATC3Q12968 1075 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 TP53BP2Q13625 1128 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 CEBPEQ15744 281 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 NNATQ16517 81 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 MAPKAPK3Q16644 382 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 TIGD2Q4W5G0 525 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 C6orf10Q5SRN2 563 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 METTL21CQ5VZV1 264 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 CGB2Q6NT52 195 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 BHLHB9Q6PI77 547 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 OPN5Q6U736 354 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 IL20RBQ6UXL0 311 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 C16orf47Q6ZP98 133 aaPredicted RBP5.86□□□□□ -1.47
LTBR-212ENST00000543542 ANKRD46Q86W74 232 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 PTRH1Q86Y79 214 aaKnown RBP5.86□□□□□ -1.47
LTBR-212ENST00000543542 HPS6Q86YV9 775 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 RIMKLAQ8IXN7 391 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 C9orf40Q8IXQ3 194 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 CLECL1Q8IZS7 167 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 TRIML2Q8N7C3 387 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 EXD3Q8N9H8 876 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 NUP43Q8NFH3 380 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 OR7G2Q8NG99 324 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 OR8J2Q8NGG1 315 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 OR8K3Q8NH51 312 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 OR5AK3PQ8NH89 298 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 C16orf52Q8NHV5 167 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 ZNF675Q8TD23 568 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 SLC9A6Q92581 669 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 JADE3Q92613 823 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 TMEM125Q96AQ2 219 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 TESCQ96BS2 214 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 MOAP1Q96BY2 351 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 ERP27Q96DN0 273 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 ELP4Q96EB1 424 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 WBP1Q96G27 269 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 ZNF764Q96H86 408 aaPredicted RBP5.86□□□□□ -1.47
LTBR-212ENST00000543542 C5orf34Q96MH7 638 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 ZNF317Q96PQ6 595 aaPredicted RBP5.86□□□□□ -1.47
LTBR-212ENST00000543542 PANX1Q96RD7 426 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 LMF1Q96S06 567 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 SMAD5Q99717 465 aaKnown RBP5.86□□□□□ -1.47
LTBR-212ENST00000543542 ITPAQ9BY32 194 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 SEMA4CQ9C0C4 833 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 WWTR1Q9GZV5 400 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 CLMPQ9H6B4 373 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 FOLH1BQ9HBA9 442 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 NEUROD4Q9HD90 331 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 SLAMF7Q9NQ25 335 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 MRGBPQ9NV56 204 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 HPF1Q9NWY4 346 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 FAM120CQ9NX05 1096 aaKnown RBP5.86□□□□□ -1.47
LTBR-212ENST00000543542 LRFN1Q9P244 771 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 MYOTQ9UBF9 498 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 ZNF223Q9UK11 482 aaPredicted RBP5.86□□□□□ -1.47
LTBR-212ENST00000543542 PPIEQ9UNP9 301 aaKnown RBP5.86□□□□□ -1.47
LTBR-212ENST00000543542 YARS2Q9Y2Z4 477 aaKnown RBP5.86□□□□□ -1.47
LTBR-212ENST00000543542 OR10H1Q9Y4A9 318 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 HEMK1Q9Y5R4 338 aaPredicted RBP5.86□□□□□ -1.47
LTBR-212ENST00000543542 COPG1Q9Y678 874 aaKnown RBP5.86□□□□□ -1.47
LTBR-212ENST00000543542 ZZEF1O43149 2961 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 LAMA5O15230 3695 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 DSPP15924 2871 aaKnown RBP5.85□□□□□ -1.47
LTBR-212ENST00000543542 A0A087WV62 115 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 RNF103-CHMP3A0A140T963 221 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 PRSS51A0A1B0GVH4 220 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 OR5H15A6NDH6 313 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 CAPN14A8MX76 684 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 K7EM74 188 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 UPK1AO00322 258 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 PLOD2O00469 737 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 RNASET2O00584 256 aaKnown RBP5.85□□□□□ -1.47
LTBR-212ENST00000543542 RFXANKO14593 260 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 ANKRD28O15084 1053 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 ANGPT2O15123 496 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 ATXN7O15265 892 aaPredicted RBP5.85□□□□□ -1.47
LTBR-212ENST00000543542 MAN1A2O60476 641 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 PLOD3O60568 738 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 CCDC22O60826 627 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 ERN1O75460 977 aaKnown RBP5.85□□□□□ -1.47
LTBR-212ENST00000543542 CBX7O95931 251 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 IGKV3-11P04433 115 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 KRT16P08779 473 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 ALOX5P09917 674 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 CD46P15529 392 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 DRD4P21917 467 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 GPX3P22352 226 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 IL12AP29459 219 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 IL12BP29460 328 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 SOX11P35716 441 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 RFX3P48380 749 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 CCT3P49368 545 aaKnown RBP5.85□□□□□ -1.47
LTBR-212ENST00000543542 PRIM2P49643 509 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 TMED10P49755 219 aaKnown RBP5.85□□□□□ -1.47
LTBR-212ENST00000543542 ATP4BP51164 291 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 MLF1P58340 268 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 C21orf58P58505 322 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 DCAF7P61962 342 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 PLCXD2Q0VAA5 305 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 MGAT2Q10469 447 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms