RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 OR4C11Q6IEV9 310 aa7.79□□□□□ -1.16
PRKAB1-207ENST00000542698 C8orf82Q6P1X6 216 aaPredicted RBP7.79□□□□□ -1.16
PRKAB1-207ENST00000542698 SLCO4C1Q6ZQN7 724 aa7.79□□□□□ -1.16
PRKAB1-207ENST00000542698 SPATC1Q76KD6 591 aa7.79□□□□□ -1.16
PRKAB1-207ENST00000542698 KLHDC8BQ8IXV7 354 aa7.79□□□□□ -1.16
PRKAB1-207ENST00000542698 DTX3Q8N9I9 347 aa7.79□□□□□ -1.16
PRKAB1-207ENST00000542698 ZNF248Q8NDW4 579 aa7.79□□□□□ -1.16
PRKAB1-207ENST00000542698 OR5AR1Q8NGP9 310 aa7.79□□□□□ -1.16
PRKAB1-207ENST00000542698 OR8K5Q8NH50 307 aa7.79□□□□□ -1.16
PRKAB1-207ENST00000542698 OR52P1PQ8NH57 321 aa7.79□□□□□ -1.16
PRKAB1-207ENST00000542698 ZNF563Q8TA94 476 aa7.79□□□□□ -1.16
PRKAB1-207ENST00000542698 GRHL3Q8TE85 626 aa7.79□□□□□ -1.16
PRKAB1-207ENST00000542698 MYLIPQ8WY64 445 aa7.79□□□□□ -1.16
PRKAB1-207ENST00000542698 AKAP1Q92667 903 aaKnown RBP eCLIP7.79□□□□□ -1.165e-9■■■■■ 39.7
PRKAB1-207ENST00000542698 DPH7Q9BTV6 452 aa7.79□□□□□ -1.16
PRKAB1-207ENST00000542698 GSDMCQ9BYG8 508 aa7.79□□□□□ -1.16
PRKAB1-207ENST00000542698 MKKSQ9NPJ1 570 aaPredicted RBP7.79□□□□□ -1.16
PRKAB1-207ENST00000542698 POLR1DQ9Y2S0 133 aa7.79□□□□□ -1.16
PRKAB1-207ENST00000542698 C1orf226A1L170 272 aa7.79□□□□□ -1.16
PRKAB1-207ENST00000542698 I3L521 148 aa7.79□□□□□ -1.16
PRKAB1-207ENST00000542698 FOXE1O00358 373 aaPredicted RBP7.79□□□□□ -1.16
PRKAB1-207ENST00000542698 SCN2BO60939 215 aa7.79□□□□□ -1.16
PRKAB1-207ENST00000542698 CYP17A1P05093 508 aa7.79□□□□□ -1.16
PRKAB1-207ENST00000542698 PYCR1P32322 319 aa7.79□□□□□ -1.16
PRKAB1-207ENST00000542698 CASP3P42574 277 aa7.79□□□□□ -1.16
PRKAB1-207ENST00000542698 TMEM107Q6UX40 140 aa7.79□□□□□ -1.16
PRKAB1-207ENST00000542698 NOXA1Q86UR1 476 aa7.79□□□□□ -1.16
PRKAB1-207ENST00000542698 TIGD4Q8IY51 512 aa7.79□□□□□ -1.16
PRKAB1-207ENST00000542698 LMNTD1Q8N9Z9 388 aa7.79□□□□□ -1.16
PRKAB1-207ENST00000542698 OR4K14Q8NGD5 310 aa7.79□□□□□ -1.16
PRKAB1-207ENST00000542698 OR51A7Q8NH64 312 aa7.79□□□□□ -1.16
PRKAB1-207ENST00000542698 FOXJ1Q92949 421 aa7.79□□□□□ -1.16
PRKAB1-207ENST00000542698 BEX1Q9HBH7 125 aa7.79□□□□□ -1.16
PRKAB1-207ENST00000542698 SOHLH2Q9NX45 425 aa7.79□□□□□ -1.16
PRKAB1-207ENST00000542698 IL20RAQ9UHF4 553 aa7.79□□□□□ -1.16
PRKAB1-207ENST00000542698 ZNF639Q9UID6 485 aa7.79□□□□□ -1.16
PRKAB1-207ENST00000542698 MAFFQ9ULX9 164 aa7.79□□□□□ -1.16
PRKAB1-207ENST00000542698 A0A0G2JPF8 293 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 HNRNPCL3B7ZW38 293 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 PDCD5O14737 125 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 PRKYO43930 277 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 HNRNPCL4P0DMR1 293 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 TGFBR2P37173 567 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 MRPL19P49406 292 aaKnown RBP7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 PRLHRP49683 370 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 SLC7A9P82251 487 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 MLLT11Q13015 90 aaPredicted RBP7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 DHCR24Q15392 516 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 LRRC26Q2I0M4 334 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 ZNF791Q3KP31 576 aaPredicted RBP7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 INAVAQ3KP66 663 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 TMEM35AQ53FP2 167 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 SOWAHCQ53LP3 525 aaPredicted RBP7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 RASSF6Q6ZTQ3 369 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 CEACAM19Q7Z692 300 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 SLC9B2Q86UD5 537 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 SLC38A5Q8WUX1 472 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 CHFRQ96EP1 664 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 ZNF334Q9HCZ1 680 aaPredicted RBP7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 NFKBIL1Q9UBC1 381 aaPredicted RBP7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 PFDN2Q9UHV9 154 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 SSC5DA1L4H1 1573 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 ZFC3H1O60293 1989 aaKnown RBP7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 DOCK1Q14185 1865 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 HMX3A6NHT5 357 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 EEF1E1O43324 174 aaKnown RBP7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 LYRM1O43325 122 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 IL1AP01583 271 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 FURINP09958 794 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 HK1P19367 917 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 LHCGRP22888 699 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 GPR4P46093 362 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 ILKQ13418 452 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 PODNL1Q6PEZ8 512 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 CNIH2Q6PI25 160 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 ENPP7Q6UWV6 458 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 COMMD2Q86X83 199 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 GPALPP1Q8IXQ4 340 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 KLHDC8AQ8IYD2 350 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 ZNF683Q8IZ20 524 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 SLC39A11Q8N1S5 342 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 HORMAD2Q8N7B1 307 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 POMGNT2Q8NAT1 580 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 ZNF740Q8NDX6 193 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 OR5D16Q8NGK9 328 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 OR2A12Q8NGT7 310 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 ACOT12Q8WYK0 555 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 FAM46AQ96IP4 442 aaKnown RBP7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 TREX2Q9BQ50 279 aaPredicted RBP7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 RHNO1Q9BSD3 238 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 DPEP2Q9H4A9 486 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 FOLH1BQ9HBA9 442 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 PLCXD1Q9NUJ7 323 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 TMEM5Q9Y2B1 443 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 TRBV4-1A0A0J9YWV2 114 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 CCDC85CA6NKD9 419 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 ANXA2P2A6NMY6 339 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 ZNF879B4DU55 563 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 FAM47E-STBD1D6RA91 191 aa7.78□□□□□ -1.16
PRKAB1-207ENST00000542698 GFYI3L273 518 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms