RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 SGO1Q5FBB7 561 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 FCRLBQ6BAA4 426 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 CPEB2Q7Z5Q1 589 aaKnown RBP8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 WDR53Q7Z5U6 358 aaPredicted RBP8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 ANKRD37Q7Z713 158 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 CRLF3Q8IUI8 442 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 LGI4Q8N135 537 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 SLC5A8Q8N695 610 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 CCNYL1Q8N7R7 359 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 CDYL2Q8N8U2 506 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 CCDC63Q8NA47 563 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 SRFBP1Q8NEF9 429 aaKnown RBP8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 OR6Y1Q8NGX8 325 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 METTL21AQ8WXB1 218 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 RNASE6Q93091 150 aaKnown RBP8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 TSLPQ969D9 159 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 UCN3Q969E3 161 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 TMEM125Q96AQ2 219 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 RGMAQ96B86 450 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 REPS1Q96D71 796 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 PGM2Q96G03 612 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 PTCHD1Q96NR3 888 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 KCNC2Q96PR1 638 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 KCNA7Q96RP8 456 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 SMC6Q96SB8 1091 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 ZNF382Q96SR6 550 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 CSF3RQ99062 836 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 MAPKAP1Q9BPZ7 522 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 MECRQ9BV79 373 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 MID1IP1Q9NPA3 183 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 NECTIN3Q9NQS3 549 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 TIMM22Q9Y584 194 aa8.18□□□□□ -1.1
TRAPPC1-202ENST00000540486 MPDZO75970 2070 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 IGKV3D-11A0A0A0MRZ8 115 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 OR14I1A6ND48 311 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 CLCA1A8K7I4 914 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 MANBAO00462 879 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 KCNAB3O43448 404 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 TMPRSS11DO60235 418 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 ERLIN1O75477 346 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 EEDO75530 441 aaKnown RBP8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 CNOT4O95628 575 aaKnown RBP8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 ESRRBO95718 433 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 CYC1P08574 325 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 RNH1P13489 461 aaKnown RBP8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 MAOAP21397 527 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 TACR1P25103 407 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 SERPINB3P29508 390 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 ARRB2P32121 409 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 HPDP32754 393 aaPredicted RBP8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 HTR6P50406 440 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 ARFIP1P53367 373 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 PKNOX1P55347 436 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 RAB38P57729 211 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 SKP1P63208 163 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 DMTNQ08495 405 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 TBL3Q12788 808 aaKnown RBP8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 LCP2Q13094 533 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 CASP8Q14790 479 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 NSDHLQ15738 373 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 AP5B1Q2VPB7 878 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 KRTAP24-1Q3LI83 254 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 FBXL19-AS1Q494R0 122 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 MFSD4BQ5TF39 518 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 LIPMQ5VYY2 423 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 TTC19Q6DKK2 380 aaPredicted RBP8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 MRM1Q6IN84 353 aaKnown RBP8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 SCIMPQ6UWF3 145 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 GPRIN3Q6ZVF9 776 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 KIF18BQ86Y91 864 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 ULK2Q8IYT8 1036 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 M1APQ8TC57 530 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 METTL6Q8TCB7 284 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 SELENOMQ8WWX9 145 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 HBEGFQ99075 208 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 SERPINI1Q99574 410 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 NPAS2Q99743 824 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 SHCBP1LQ9BZQ2 653 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 CENPHQ9H3R5 247 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 DDX31Q9H8H2 851 aaKnown RBP8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 TRIM45Q9H8W5 580 aaPredicted RBP8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 TMBIM4Q9HC24 238 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 SSU72Q9NP77 194 aaKnown RBP8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 C19orf25Q9UFG5 118 aaPredicted RBP8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 FBXW2Q9UKT8 454 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 KLF13Q9Y2Y9 288 aaPredicted RBP8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 ATG4BQ9Y4P1 393 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 ASB4Q9Y574 426 aa8.17□□□□□ -1.1
TRAPPC1-202ENST00000540486 A0A088AWK7 358 aa8.16□□□□□ -1.1
TRAPPC1-202ENST00000540486 A0A0A6YYD5 115 aa8.16□□□□□ -1.1
TRAPPC1-202ENST00000540486 MYOCOSA0A1B0GUC4 107 aa8.16□□□□□ -1.1
TRAPPC1-202ENST00000540486 A0A1W2PR48 441 aa8.16□□□□□ -1.1
TRAPPC1-202ENST00000540486 TCRBV16S1A1N1A0A5B0 115 aa8.16□□□□□ -1.1
TRAPPC1-202ENST00000540486 NPIPA2E9PIF3 369 aa8.16□□□□□ -1.1
TRAPPC1-202ENST00000540486 NPIPA3F8WFD2 350 aa8.16□□□□□ -1.1
TRAPPC1-202ENST00000540486 BCKDKO14874 412 aa8.16□□□□□ -1.1
TRAPPC1-202ENST00000540486 TLX2O43763 284 aaPredicted RBP8.16□□□□□ -1.1
TRAPPC1-202ENST00000540486 CTNSO60931 367 aa8.16□□□□□ -1.1
TRAPPC1-202ENST00000540486 DNAJC13O75165 2243 aa8.16□□□□□ -1.1
TRAPPC1-202ENST00000540486 ULK1O75385 1050 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms