RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 NUBPLQ8TB37 319 aa11.78□□□□□ -0.52
TSPAN9-207ENST00000539631 HAS2Q92819 552 aa11.78□□□□□ -0.52
TSPAN9-207ENST00000539631 ELP4Q96EB1 424 aa11.78□□□□□ -0.52
TSPAN9-207ENST00000539631 MAGED4Q96JG8 741 aa11.78□□□□□ -0.52
TSPAN9-207ENST00000539631 ZNF317Q96PQ6 595 aaPredicted RBP11.78□□□□□ -0.52
TSPAN9-207ENST00000539631 WWTR1Q9GZV5 400 aa11.78□□□□□ -0.52
TSPAN9-207ENST00000539631 CLMPQ9H6B4 373 aa11.78□□□□□ -0.52
TSPAN9-207ENST00000539631 ANKRD10Q9NXR5 420 aa11.78□□□□□ -0.52
TSPAN9-207ENST00000539631 ABI3Q9P2A4 366 aa11.78□□□□□ -0.52
TSPAN9-207ENST00000539631 YARS2Q9Y2Z4 477 aaKnown RBP11.78□□□□□ -0.52
TSPAN9-207ENST00000539631 EXPH5Q8NEV8 1989 aa11.78□□□□□ -0.52
TSPAN9-207ENST00000539631 A0A087WV62 115 aa11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 C2orf92A0A1B0GVN3 265 aa11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 DYTNA2CJ06 578 aa11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 OR5H15A6NDH6 313 aa11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 PLOD3O60568 738 aa11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 PRAMEF2O60811 474 aa11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 BCAS2O75934 225 aaPredicted RBP11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 SLITRK5O94991 958 aa11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 NADKO95544 446 aaPredicted RBP11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 C6orf47O95873 294 aa11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 TROVE2P10155 538 aaKnown RBP eCLIP11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 GPX3P22352 226 aa11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 CD96P40200 585 aa11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 EMDP50402 254 aa11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 NR0B1P51843 470 aaKnown RBP11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 PHC1P78364 1004 aa11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 SRSF11Q05519 484 aaKnown RBP11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 KLRB1Q12918 225 aa11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 TUBA3CQ13748 450 aa11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 MLC1Q15049 377 aa11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 SPANXN4Q5MJ08 99 aa11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 TUBA3EQ6PEY2 450 aa11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 PAOXQ6QHF9 649 aa11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 CLECL1Q8IZS7 167 aa11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 NATD1Q8N6N6 113 aa11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 TEX19Q8NA77 164 aa11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 OR8J2Q8NGG1 315 aa11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 STON2Q8WXE9 905 aa11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 OR5P2Q8WZ92 322 aa11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 ADIPOR1Q96A54 375 aa11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 TESCQ96BS2 214 aa11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 ERP27Q96DN0 273 aa11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 RILPQ96NA2 401 aa11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 SIGLEC12Q96PQ1 595 aa11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 RASL10BQ96S79 203 aa11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 UTP23Q9BRU9 249 aaKnown RBP11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 SIKE1Q9BRV8 207 aa11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 TMEM120AQ9BXJ8 343 aa11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 ITPAQ9BY32 194 aa11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 RNF32Q9H0A6 362 aa11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 SIRT3Q9NTG7 399 aaPredicted RBP11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 FAM53CQ9NYF3 392 aa11.77□□□□□ -0.53
TSPAN9-207ENST00000539631 EML6Q6ZMW3 1958 aa11.76□□□□□ -0.53
TSPAN9-207ENST00000539631 UPK1AO00322 258 aa11.76□□□□□ -0.53
TSPAN9-207ENST00000539631 SCN2BO60939 215 aa11.76□□□□□ -0.53
TSPAN9-207ENST00000539631 SLC22A3O75751 556 aa11.76□□□□□ -0.53
TSPAN9-207ENST00000539631 S100A3P33764 101 aa11.76□□□□□ -0.53
TSPAN9-207ENST00000539631 TRHRP34981 398 aaPredicted RBP11.76□□□□□ -0.53
TSPAN9-207ENST00000539631 SOX3P41225 446 aa11.76□□□□□ -0.53
TSPAN9-207ENST00000539631 KIR3DL1P43629 444 aa11.76□□□□□ -0.53
TSPAN9-207ENST00000539631 ZFP36L2P47974 494 aaKnown RBP11.76□□□□□ -0.53
TSPAN9-207ENST00000539631 TNFSF10P50591 281 aa11.76□□□□□ -0.53
TSPAN9-207ENST00000539631 SSR4P51571 173 aa11.76□□□□□ -0.53
TSPAN9-207ENST00000539631 DGKQP52824 942 aa11.76□□□□□ -0.53
TSPAN9-207ENST00000539631 OC90Q02509 493 aaPredicted RBP11.76□□□□□ -0.53
TSPAN9-207ENST00000539631 FAM174BQ3ZCQ3 159 aa11.76□□□□□ -0.53
TSPAN9-207ENST00000539631 PLEKHN1Q494U1 663 aaPredicted RBP11.76□□□□□ -0.53
TSPAN9-207ENST00000539631 PIGGQ5H8A4 983 aa11.76□□□□□ -0.53
TSPAN9-207ENST00000539631 HLA-DQA1Q5Y7H0 255 aa11.76□□□□□ -0.53
TSPAN9-207ENST00000539631 SLC6A19Q695T7 634 aa11.76□□□□□ -0.53
TSPAN9-207ENST00000539631 Q6ZS92 163 aa11.76□□□□□ -0.53
TSPAN9-207ENST00000539631 MIER2Q8N344 545 aa11.76□□□□□ -0.53
TSPAN9-207ENST00000539631 OR2L13Q8N349 312 aa11.76□□□□□ -0.53
TSPAN9-207ENST00000539631 TMEM156Q8N614 296 aa11.76□□□□□ -0.53
TSPAN9-207ENST00000539631 ZNF441Q8N8Z8 693 aa11.76□□□□□ -0.53
TSPAN9-207ENST00000539631 OR9I1Q8NGQ6 314 aa11.76□□□□□ -0.53
TSPAN9-207ENST00000539631 ASB15Q8WXK1 588 aa11.76□□□□□ -0.53
TSPAN9-207ENST00000539631 ZBTB18Q99592 522 aa11.76□□□□□ -0.53
TSPAN9-207ENST00000539631 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.76□□□□□ -0.53
TSPAN9-207ENST00000539631 FOLH1BQ9HBA9 442 aa11.76□□□□□ -0.53
TSPAN9-207ENST00000539631 SDR39U1Q9NRG7 319 aaPredicted RBP11.76□□□□□ -0.53
TSPAN9-207ENST00000539631 DDX18Q9NVP1 670 aaKnown RBP11.76□□□□□ -0.53
TSPAN9-207ENST00000539631 ZIM2Q9NZV7 527 aa11.76□□□□□ -0.53
TSPAN9-207ENST00000539631 LUZP4Q9P127 313 aa11.76□□□□□ -0.53
TSPAN9-207ENST00000539631 LRFN1Q9P244 771 aa11.76□□□□□ -0.53
TSPAN9-207ENST00000539631 PRODH2Q9UF12 536 aa11.76□□□□□ -0.53
TSPAN9-207ENST00000539631 C19orf53Q9UNZ5 99 aaPredicted RBP11.76□□□□□ -0.53
TSPAN9-207ENST00000539631 CFL2Q9Y281 166 aa11.76□□□□□ -0.53
TSPAN9-207ENST00000539631 HEMK1Q9Y5R4 338 aaPredicted RBP11.76□□□□□ -0.53
TSPAN9-207ENST00000539631 RNASET2O00584 256 aaKnown RBP11.75□□□□□ -0.53
TSPAN9-207ENST00000539631 CFLARO15519 480 aa11.75□□□□□ -0.53
TSPAN9-207ENST00000539631 EMC8O43402 210 aa11.75□□□□□ -0.53
TSPAN9-207ENST00000539631 COQ9O75208 318 aa11.75□□□□□ -0.53
TSPAN9-207ENST00000539631 C1QL1O75973 258 aa11.75□□□□□ -0.53
TSPAN9-207ENST00000539631 OR6B1O95007 311 aa11.75□□□□□ -0.53
TSPAN9-207ENST00000539631 CPSF4O95639 269 aaKnown RBP11.75□□□□□ -0.53
TSPAN9-207ENST00000539631 ABCB1P08183 1280 aaPredicted RBP11.75□□□□□ -0.53
TSPAN9-207ENST00000539631 IFI6P09912 130 aa11.75□□□□□ -0.53
TSPAN9-207ENST00000539631 NCF2P19878 526 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms