RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 GSTM5P46439 218 aa16.11■□□□□ 0.17
PCDHB17P-201ENST00000539533 MVDP53602 400 aa16.11■□□□□ 0.17
PCDHB17P-201ENST00000539533 MANFP55145 182 aaKnown RBP16.11■□□□□ 0.17
PCDHB17P-201ENST00000539533 ARF3P61204 181 aaPredicted RBP16.11■□□□□ 0.17
PCDHB17P-201ENST00000539533 SIGLEC14Q08ET2 396 aa16.11■□□□□ 0.17
PCDHB17P-201ENST00000539533 COX20Q5RI15 118 aa16.11■□□□□ 0.17
PCDHB17P-201ENST00000539533 ZCCHC10Q8TBK6 192 aa16.11■□□□□ 0.17
PCDHB17P-201ENST00000539533 GAL3ST3Q96A11 431 aa16.11■□□□□ 0.17
PCDHB17P-201ENST00000539533 TBC1D20Q96BZ9 403 aa16.11■□□□□ 0.17
PCDHB17P-201ENST00000539533 NDEL1Q9GZM8 345 aa16.11■□□□□ 0.17
PCDHB17P-201ENST00000539533 CHST8Q9H2A9 424 aa16.11■□□□□ 0.17
PCDHB17P-201ENST00000539533 CXorf36Q9H7Y0 433 aa16.11■□□□□ 0.17
PCDHB17P-201ENST00000539533 TMEM74BQ9NUR3 256 aa16.11■□□□□ 0.17
PCDHB17P-201ENST00000539533 POMT2Q9UKY4 750 aa16.11■□□□□ 0.17
PCDHB17P-201ENST00000539533 GMPPBQ9Y5P6 360 aa16.11■□□□□ 0.17
PCDHB17P-201ENST00000539533 PGRMC2O15173 223 aa16.1■□□□□ 0.17
PCDHB17P-201ENST00000539533 PDPK1O15530 556 aa16.1■□□□□ 0.17
PCDHB17P-201ENST00000539533 RGS10O43665 173 aa16.1■□□□□ 0.17
PCDHB17P-201ENST00000539533 ZNF682O95780 498 aa16.1■□□□□ 0.17
PCDHB17P-201ENST00000539533 C9P02748 559 aa16.1■□□□□ 0.17
PCDHB17P-201ENST00000539533 HOXA6P31267 233 aa16.1■□□□□ 0.17
PCDHB17P-201ENST00000539533 DHPSP49366 369 aaPredicted RBP16.1■□□□□ 0.17
PCDHB17P-201ENST00000539533 ARFIP1P53367 373 aa16.1■□□□□ 0.17
PCDHB17P-201ENST00000539533 PCBP4P57723 403 aaKnown RBP16.1■□□□□ 0.17
PCDHB17P-201ENST00000539533 CLPPQ16740 277 aaPredicted RBP16.1■□□□□ 0.17
PCDHB17P-201ENST00000539533 VMACQ2NL98 169 aa16.1■□□□□ 0.17
PCDHB17P-201ENST00000539533 C18orf63Q68DL7 685 aa16.1■□□□□ 0.17
PCDHB17P-201ENST00000539533 KDM4DQ6B0I6 523 aa16.1■□□□□ 0.17
PCDHB17P-201ENST00000539533 OR2T5Q6IEZ7 315 aa16.1■□□□□ 0.17
PCDHB17P-201ENST00000539533 C17orf82Q86X59 251 aaPredicted RBP16.1■□□□□ 0.17
PCDHB17P-201ENST00000539533 SVOPQ8N4V2 548 aa16.1■□□□□ 0.17
PCDHB17P-201ENST00000539533 ZNF540Q8NDQ6 660 aa16.1■□□□□ 0.17
PCDHB17P-201ENST00000539533 OR2T29Q8NH02 315 aa16.1■□□□□ 0.17
PCDHB17P-201ENST00000539533 SLC38A3Q99624 504 aa16.1■□□□□ 0.17
PCDHB17P-201ENST00000539533 APOL4Q9BPW4 351 aa16.1■□□□□ 0.17
PCDHB17P-201ENST00000539533 SLIRPQ9GZT3 109 aaKnown RBP16.1■□□□□ 0.17
PCDHB17P-201ENST00000539533 FAM60AQ9NP50 221 aa16.1■□□□□ 0.17
PCDHB17P-201ENST00000539533 ACOT13Q9NPJ3 140 aa16.1■□□□□ 0.17
PCDHB17P-201ENST00000539533 POLE4Q9NR33 117 aa16.1■□□□□ 0.17
PCDHB17P-201ENST00000539533 RAPGEFL1Q9UHV5 662 aa16.1■□□□□ 0.17
PCDHB17P-201ENST00000539533 SNX8Q9Y5X2 465 aa16.1■□□□□ 0.17
PCDHB17P-201ENST00000539533 SPEGQ15772 3267 aa16.1■□□□□ 0.17
PCDHB17P-201ENST00000539533 DRD2P14416 443 aa16.09■□□□□ 0.17
PCDHB17P-201ENST00000539533 SOAT1P35610 550 aa16.09■□□□□ 0.17
PCDHB17P-201ENST00000539533 ARHGDIAP52565 204 aa16.09■□□□□ 0.17
PCDHB17P-201ENST00000539533 MVKQ03426 396 aa16.09■□□□□ 0.17
PCDHB17P-201ENST00000539533 MAPK11Q15759 364 aa16.09■□□□□ 0.17
PCDHB17P-201ENST00000539533 SMN1Q16637 294 aaKnown RBP16.09■□□□□ 0.17
PCDHB17P-201ENST00000539533 PRSS48Q7RTY5 328 aa16.09■□□□□ 0.17
PCDHB17P-201ENST00000539533 GALNT10Q86SR1 603 aa16.09■□□□□ 0.17
PCDHB17P-201ENST00000539533 MAL2Q969L2 176 aa16.09■□□□□ 0.17
PCDHB17P-201ENST00000539533 MAPKAP1Q9BPZ7 522 aa16.09■□□□□ 0.17
PCDHB17P-201ENST00000539533 SAMD4AQ9UPU9 718 aaKnown RBP16.09■□□□□ 0.17
PCDHB17P-201ENST00000539533 TP53BP1Q12888 1972 aaPredicted RBP16.09■□□□□ 0.17
PCDHB17P-201ENST00000539533 CCDC163A0A0D9SF12 145 aa16.09■□□□□ 0.17
PCDHB17P-201ENST00000539533 MYO1GB0I1T2 1018 aa16.09■□□□□ 0.17
PCDHB17P-201ENST00000539533 DNAJB6O75190 326 aa16.09■□□□□ 0.17
PCDHB17P-201ENST00000539533 FKBP9O95302 570 aa16.09■□□□□ 0.17
PCDHB17P-201ENST00000539533 TDGF1P13385 188 aa16.09■□□□□ 0.17
PCDHB17P-201ENST00000539533 ETFAP13804 333 aa16.09■□□□□ 0.17
PCDHB17P-201ENST00000539533 PPIBP23284 216 aaKnown RBP16.09■□□□□ 0.17
PCDHB17P-201ENST00000539533 CRATP43155 626 aa16.09■□□□□ 0.17
PCDHB17P-201ENST00000539533 TSFMP43897 325 aaKnown RBP16.09■□□□□ 0.17
PCDHB17P-201ENST00000539533 TGM3Q08188 693 aa16.09■□□□□ 0.17
PCDHB17P-201ENST00000539533 HSPB3Q12988 150 aa16.09■□□□□ 0.17
PCDHB17P-201ENST00000539533 NDUFA5Q16718 116 aa16.09■□□□□ 0.17
PCDHB17P-201ENST00000539533 DEFB134Q4QY38 66 aa16.09■□□□□ 0.17
PCDHB17P-201ENST00000539533 OGFOD3Q6PK18 319 aa16.09■□□□□ 0.17
PCDHB17P-201ENST00000539533 SLC22A16Q86VW1 577 aa16.09■□□□□ 0.17
PCDHB17P-201ENST00000539533 RPL3LQ92901 407 aaKnown RBP16.09■□□□□ 0.17
PCDHB17P-201ENST00000539533 RERGQ96A58 199 aaPredicted RBP16.09■□□□□ 0.17
PCDHB17P-201ENST00000539533 LGALS12Q96DT0 336 aa16.09■□□□□ 0.17
PCDHB17P-201ENST00000539533 FAIM2Q9BWQ8 316 aa16.09■□□□□ 0.17
PCDHB17P-201ENST00000539533 SEMA6CQ9H3T2 930 aa16.09■□□□□ 0.17
PCDHB17P-201ENST00000539533 CCNB1IP1Q9NPC3 277 aa16.09■□□□□ 0.17
PCDHB17P-201ENST00000539533 IL1RAPQ9NPH3 570 aa16.09■□□□□ 0.17
PCDHB17P-201ENST00000539533 TAS2R7Q9NYW3 318 aa16.09■□□□□ 0.17
PCDHB17P-201ENST00000539533 MRPS2Q9Y399 296 aaKnown RBP16.09■□□□□ 0.17
PCDHB17P-201ENST00000539533 TECTAO75443 2155 aa16.09■□□□□ 0.17
PCDHB17P-201ENST00000539533 FAM20BO75063 409 aa16.08■□□□□ 0.17
PCDHB17P-201ENST00000539533 AIFM1O95831 613 aa16.08■□□□□ 0.17
PCDHB17P-201ENST00000539533 SMIM10L1P0DMW3 83 aa16.08■□□□□ 0.17
PCDHB17P-201ENST00000539533 CHI3L1P36222 383 aaPredicted RBP16.08■□□□□ 0.17
PCDHB17P-201ENST00000539533 FRKP42685 505 aaPredicted RBP16.08■□□□□ 0.17
PCDHB17P-201ENST00000539533 MAD2L1BPQ15013 274 aaPredicted RBP16.08■□□□□ 0.17
PCDHB17P-201ENST00000539533 RNF44Q7L0R7 432 aa16.08■□□□□ 0.17
PCDHB17P-201ENST00000539533 RNF130Q86XS8 419 aa16.08■□□□□ 0.17
PCDHB17P-201ENST00000539533 SLC25A45Q8N413 288 aa16.08■□□□□ 0.17
PCDHB17P-201ENST00000539533 TTC29Q8NA56 475 aaPredicted RBP16.08■□□□□ 0.17
PCDHB17P-201ENST00000539533 CAMKVQ8NCB2 501 aa16.08■□□□□ 0.17
PCDHB17P-201ENST00000539533 OR5P2Q8WZ92 322 aa16.08■□□□□ 0.17
PCDHB17P-201ENST00000539533 SMIM10Q96HG1 83 aa16.08■□□□□ 0.17
PCDHB17P-201ENST00000539533 DSN1Q9H410 356 aa16.08■□□□□ 0.17
PCDHB17P-201ENST00000539533 STARD5Q9NSY2 213 aa16.08■□□□□ 0.17
PCDHB17P-201ENST00000539533 ZNF229Q9UJW7 825 aa16.08■□□□□ 0.17
PCDHB17P-201ENST00000539533 NDRG4Q9ULP0 352 aaKnown RBP16.08■□□□□ 0.17
PCDHB17P-201ENST00000539533 MAP4K5Q9Y4K4 846 aa16.08■□□□□ 0.17
PCDHB17P-201ENST00000539533 PROM1O43490 865 aa16.08■□□□□ 0.16
PCDHB17P-201ENST00000539533 ERAL1O75616 437 aaKnown RBP16.08■□□□□ 0.16
PCDHB17P-201ENST00000539533 PROS1P07225 676 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms