RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 MIEF1Q9NQG6 463 aa12.07□□□□□ -0.48
CCDC42-202ENST00000539522 NDE1Q9NXR1 346 aa12.07□□□□□ -0.48
CCDC42-202ENST00000539522 SH3BP4Q9P0V3 963 aa12.07□□□□□ -0.48
CCDC42-202ENST00000539522 CSAG2Q9Y5P2 127 aa12.07□□□□□ -0.48
CCDC42-202ENST00000539522 ZNF780BQ9Y6R6 833 aa12.07□□□□□ -0.48
CCDC42-202ENST00000539522 NUP214P35658 2090 aaPredicted RBP12.06□□□□□ -0.48
CCDC42-202ENST00000539522 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 BBIP1A8MTZ0 92 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 UPK1AO00322 258 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 AIM2O14862 343 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 GSC2O15499 205 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 PDPK1O15530 556 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 OR10H2O60403 315 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 COX7A2P14406 83 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 HOXB9P17482 250 aaPredicted RBP12.06□□□□□ -0.48
CCDC42-202ENST00000539522 NT5EP21589 574 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 HPCAL1P37235 193 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 MC3RP41968 323 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 CPA2P48052 419 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 EMDP50402 254 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 NCBP2P52298 156 aaKnown RBP eCLIP12.06□□□□□ -0.48
CCDC42-202ENST00000539522 CLNS1AP54105 237 aaKnown RBP12.06□□□□□ -0.48
CCDC42-202ENST00000539522 CORO7P57737 925 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 BIKQ13323 160 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 MYBPC3Q14896 1274 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 MLC1Q15049 377 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 EXT1Q16394 746 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 FAM174BQ3ZCQ3 159 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 MMEL1Q495T6 779 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 DNAL1Q4LDG9 190 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 COQ5Q5HYK3 327 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 CPTPQ5TA50 214 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 ZNF468Q5VIY5 522 aaPredicted RBP12.06□□□□□ -0.48
CCDC42-202ENST00000539522 GK5Q6ZS86 529 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 ZNF227Q86WZ6 799 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 GALNT12Q8IXK2 581 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 KBTBD2Q8IY47 623 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 PCYOX1LQ8NBM8 494 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 PSMA8Q8TAA3 256 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 ELP4Q96EB1 424 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 GIMAP5Q96F15 307 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 VMP1Q96GC9 406 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 RBM18Q96H35 190 aaKnown RBP12.06□□□□□ -0.48
CCDC42-202ENST00000539522 BBC3Q96PG8 261 aaPredicted RBP12.06□□□□□ -0.48
CCDC42-202ENST00000539522 DUSP26Q9BV47 211 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 CNPPD1Q9BV87 410 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 LHPPQ9H008 270 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 MMADHCQ9H3L0 296 aaPredicted RBP12.06□□□□□ -0.48
CCDC42-202ENST00000539522 CXorf36Q9H7Y0 433 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 SERHLQ9NQF3 203 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 SLC6A13Q9NSD5 602 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 PSME2Q9UL46 239 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 CLCA3PQ9Y6N3 262 aa12.06□□□□□ -0.48
CCDC42-202ENST00000539522 TRBV11-1A0A0K0K1C0 115 aa12.05□□□□□ -0.48
CCDC42-202ENST00000539522 A0A1W2PP18 115 aa12.05□□□□□ -0.48
CCDC42-202ENST00000539522 CCDC154A6NI56 674 aa12.05□□□□□ -0.48
CCDC42-202ENST00000539522 ANKRD65E5RJM6 399 aa12.05□□□□□ -0.48
CCDC42-202ENST00000539522 PLOD2O00469 737 aa12.05□□□□□ -0.48
CCDC42-202ENST00000539522 PLOD3O60568 738 aa12.05□□□□□ -0.48
CCDC42-202ENST00000539522 NADKO95544 446 aaPredicted RBP12.05□□□□□ -0.48
CCDC42-202ENST00000539522 C6orf47O95873 294 aa12.05□□□□□ -0.48
CCDC42-202ENST00000539522 IL6P05231 212 aa12.05□□□□□ -0.48
CCDC42-202ENST00000539522 TNNI3P19429 210 aa12.05□□□□□ -0.48
CCDC42-202ENST00000539522 CAPN3P20807 821 aa12.05□□□□□ -0.48
CCDC42-202ENST00000539522 ITGA3P26006 1051 aa12.05□□□□□ -0.48
CCDC42-202ENST00000539522 PTPN6P29350 595 aa12.05□□□□□ -0.48
CCDC42-202ENST00000539522 RPL3P39023 403 aaKnown RBP12.05□□□□□ -0.48
CCDC42-202ENST00000539522 CDKN2CP42773 168 aa12.05□□□□□ -0.48
CCDC42-202ENST00000539522 RRADP55042 308 aa12.05□□□□□ -0.48
CCDC42-202ENST00000539522 HBA1P69905 142 aa12.05□□□□□ -0.48
CCDC42-202ENST00000539522 RNF4P78317 190 aa12.05□□□□□ -0.48
CCDC42-202ENST00000539522 EBPQ15125 230 aaKnown RBP12.05□□□□□ -0.48
CCDC42-202ENST00000539522 EXOSC6Q5RKV6 272 aaKnown RBP12.05□□□□□ -0.48
CCDC42-202ENST00000539522 IGFL2Q6UWQ7 119 aa12.05□□□□□ -0.48
CCDC42-202ENST00000539522 TMEM107Q6UX40 140 aa12.05□□□□□ -0.48
CCDC42-202ENST00000539522 C16orf89Q6UX73 402 aa12.05□□□□□ -0.48
CCDC42-202ENST00000539522 LYPD8Q6UX82 237 aa12.05□□□□□ -0.48
CCDC42-202ENST00000539522 R3HCC1LQ7Z5L2 792 aaKnown RBP12.05□□□□□ -0.48
CCDC42-202ENST00000539522 ANKRD46Q86W74 232 aa12.05□□□□□ -0.48
CCDC42-202ENST00000539522 CLEC4FQ8N1N0 589 aa12.05□□□□□ -0.48
CCDC42-202ENST00000539522 OR2L13Q8N349 312 aa12.05□□□□□ -0.48
CCDC42-202ENST00000539522 VWA5B2Q8N398 1253 aa12.05□□□□□ -0.48
CCDC42-202ENST00000539522 CLEC1AQ8NC01 280 aa12.05□□□□□ -0.48
CCDC42-202ENST00000539522 RBM15BQ8NDT2 890 aaKnown RBP12.05□□□□□ -0.48
CCDC42-202ENST00000539522 C16orf52Q8NHV5 167 aa12.05□□□□□ -0.48
CCDC42-202ENST00000539522 DAZLQ92904 295 aaKnown RBP12.05□□□□□ -0.48
CCDC42-202ENST00000539522 ADIPOR1Q96A54 375 aa12.05□□□□□ -0.48
CCDC42-202ENST00000539522 SPDL1Q96EA4 605 aa12.05□□□□□ -0.48
CCDC42-202ENST00000539522 ABHD17AQ96GS6 310 aa12.05□□□□□ -0.48
CCDC42-202ENST00000539522 RAB3IPQ96QF0 476 aaPredicted RBP12.05□□□□□ -0.48
CCDC42-202ENST00000539522 SMAD5Q99717 465 aaKnown RBP12.05□□□□□ -0.48
CCDC42-202ENST00000539522 PELOQ9BRX2 385 aaKnown RBP12.05□□□□□ -0.48
CCDC42-202ENST00000539522 INPP5KQ9BT40 448 aa12.05□□□□□ -0.48
CCDC42-202ENST00000539522 BHLHE41Q9C0J9 482 aaPredicted RBP12.05□□□□□ -0.48
CCDC42-202ENST00000539522 OR10A5Q9H207 317 aa12.05□□□□□ -0.48
CCDC42-202ENST00000539522 ACSS1Q9NUB1 689 aaPredicted RBP12.05□□□□□ -0.48
CCDC42-202ENST00000539522 GPR83Q9NYM4 423 aa12.05□□□□□ -0.48
CCDC42-202ENST00000539522 NTMQ9P121 344 aa12.05□□□□□ -0.48
CCDC42-202ENST00000539522 PTGFRNQ9P2B2 879 aa12.05□□□□□ -0.48
CCDC42-202ENST00000539522 ENTPD4Q9Y227 616 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms