RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 LAS2Q8IYD9 372 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 PHACTR4Q8IZ21 702 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 EID2Q8N6I1 236 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 NETO2Q8NC67 525 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 BVESQ8NE79 360 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 OR52B6Q8NGF0 335 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 OR56B4Q8NH76 319 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 CLHC1Q8NHS4 586 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 CD200R1Q8TD46 325 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 SETD7Q8WTS6 366 aaKnown RBP6.35□□□□□ -1.39
USP28-207ENST00000538475 SLC9A6Q92581 669 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 ATOH1Q92858 354 aaPredicted RBP6.35□□□□□ -1.39
USP28-207ENST00000538475 LINGO1Q96FE5 620 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 SCRN2Q96FV2 425 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 TRMT61AQ96FX7 289 aaKnown RBP6.35□□□□□ -1.39
USP28-207ENST00000538475 ARL5BQ96KC2 179 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 HIST1H2AHQ96KK5 128 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 C10orf90Q96M02 699 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 FDXACB1Q9BRP7 624 aaPredicted RBP6.35□□□□□ -1.39
USP28-207ENST00000538475 YIPF4Q9BSR8 244 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 MED10Q9BTT4 135 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 JAM3Q9BX67 310 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 POLDIP3Q9BY77 421 aaKnown RBP6.35□□□□□ -1.39
USP28-207ENST00000538475 PRRG3Q9BZD7 231 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 CHST8Q9H2A9 424 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 TMEM38AQ9H6F2 299 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 AGO3Q9H9G7 860 aaKnown RBP6.35□□□□□ -1.39
USP28-207ENST00000538475 SP110Q9HB58 689 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 GALNT9Q9HCQ5 603 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 DLL4Q9NR61 685 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 TLR8Q9NR97 1041 aaKnown RBP6.35□□□□□ -1.39
USP28-207ENST00000538475 CYSLTR2Q9NS75 346 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 MBNL3Q9NUK0 354 aaKnown RBP6.35□□□□□ -1.39
USP28-207ENST00000538475 HPF1Q9NWY4 346 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 COX16Q9P0S2 106 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 UXTQ9UBK9 157 aaPredicted RBP6.35□□□□□ -1.39
USP28-207ENST00000538475 ZNF282Q9UDV7 671 aaPredicted RBP6.35□□□□□ -1.39
USP28-207ENST00000538475 PURGQ9UJV8 347 aaKnown RBP6.35□□□□□ -1.39
USP28-207ENST00000538475 KCND3Q9UK17 655 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 SF3B6Q9Y3B4 125 aaKnown RBP6.35□□□□□ -1.39
USP28-207ENST00000538475 ZNF451Q9Y4E5 1061 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 CLCA3PQ9Y6N3 262 aa6.35□□□□□ -1.39
USP28-207ENST00000538475 TP53BP1Q12888 1972 aaPredicted RBP6.35□□□□□ -1.39
USP28-207ENST00000538475 TEX13CA0A0J9YWL9 993 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 CIB4A0PJX0 185 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 TMEM82A0PJX8 343 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 NUDT19A8MXV4 375 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 ISM1B1AKI9 464 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 HHLA1C9JL84 531 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 TEX46H3BTG2 121 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 GPR171O14626 319 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 CTDSPLO15194 276 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 PLOD3O60568 738 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 TSC22D2O75157 780 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 ENTPD6O75354 484 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 RASGRP1O95267 797 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 MPC2O95563 127 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 EGFP01133 1207 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 TCRBP04435 133 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 S100A8P05109 93 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 THP07101 528 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 ADRB1P08588 477 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 HBQ1P09105 142 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 GIPP09681 153 aaPredicted RBP6.34□□□□□ -1.39
USP28-207ENST00000538475 CBSLP0DN79 551 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 CPN1P15169 458 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 BPIP17213 487 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 LPOP22079 712 aaPredicted RBP6.34□□□□□ -1.39
USP28-207ENST00000538475 DGKAP23743 735 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 PCSK1P29120 753 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 CCND3P30281 292 aaPredicted RBP6.34□□□□□ -1.39
USP28-207ENST00000538475 RPL9P32969 192 aaKnown RBP6.34□□□□□ -1.39
USP28-207ENST00000538475 CBSP35520 551 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 KCNJ5P48544 419 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 MTNR1BP49286 362 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 ZNF81P51508 661 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 NUDT6P53370 316 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 EPHA5P54756 1037 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 CYP4F8P98187 520 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 C2orf80Q0P641 193 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 OPCMLQ14982 345 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 HEPACAMQ14CZ8 416 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 MICBQ29980 383 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 ZNF630Q2M218 657 aaPredicted RBP6.34□□□□□ -1.39
USP28-207ENST00000538475 FAM214AQ32MH5 1076 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 ZRANB3Q5FWF4 1079 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 NOMO2Q5JPE7 1267 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 ZNF57Q68EA5 555 aaPredicted RBP6.34□□□□□ -1.39
USP28-207ENST00000538475 SLC27A4Q6P1M0 643 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 BHLHB9Q6PI77 547 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 UQCC3Q6UW78 93 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 SCIMPQ6UWF3 145 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 SUSD1Q6UWL2 747 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 SBSNQ6UWP8 590 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 LINGO4Q6UY18 593 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 LIPIQ6XZB0 460 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 ZNF704Q6ZNC4 412 aaPredicted RBP6.34□□□□□ -1.39
USP28-207ENST00000538475 CFAP77Q6ZQR2 320 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 USP30Q70CQ3 517 aa6.34□□□□□ -1.39
USP28-207ENST00000538475 BHLHA9Q7RTU4 235 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms