RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 SWT1Q5T5J6 900 aaKnown RBP5.09□□□□□ -1.59
LRP6-203ENST00000538239 FCRLBQ6BAA4 426 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 OR5M10Q6IEU7 315 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 RSPO2Q6UXX9 243 aaPredicted RBP5.09□□□□□ -1.59
LRP6-203ENST00000538239 ZNF440Q8IYI8 595 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 OR13C3Q8NGS6 347 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 IFI44Q8TCB0 444 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 TNFAIP8L1Q8WVP5 186 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 CPNE2Q96FN4 548 aaPredicted RBP5.09□□□□□ -1.59
LRP6-203ENST00000538239 FAM46AQ96IP4 442 aaKnown RBP5.09□□□□□ -1.59
LRP6-203ENST00000538239 INPP5KQ9BT40 448 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 HDAC8Q9BY41 377 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 WBP11Q9Y2W2 641 aaKnown RBP5.09□□□□□ -1.59
LRP6-203ENST00000538239 SH3PXD2BA1X283 911 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 GGT3PA6NGU5 568 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 TOR1BO14657 336 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 KLF11O14901 512 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 ABCB7O75027 752 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 CLPXO76031 633 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 SCGB1D2O95969 90 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 PRLP01236 227 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 LAMP1P11279 417 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 FPR1P21462 350 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 SOX2P48431 317 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 GINS1Q14691 196 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 TMEM201Q5SNT2 666 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 USP43Q70EL4 1123 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 CROCCP3Q8IVE0 287 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 FAM174AQ8TBP5 190 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 TM9SF4Q92544 642 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 NINJ1Q92982 152 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 TESCQ96BS2 214 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 TMEM80Q96HE8 168 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 BARD1Q99728 777 aaKnown RBP5.09□□□□□ -1.6
LRP6-203ENST00000538239 TBC1D24Q9ULP9 559 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 ZCWPW2A0A1B0GU75 182 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 SHISA7A6NL88 538 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 J3QRK9 145 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 AK1P00568 194 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 GSTT2BP0CG30 244 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 CFL1P23528 166 aaKnown RBP5.09□□□□□ -1.6
LRP6-203ENST00000538239 VASPP50552 380 aaPredicted RBP5.09□□□□□ -1.6
LRP6-203ENST00000538239 BCAP31P51572 246 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 DCTN2Q13561 401 aaKnown RBP5.09□□□□□ -1.6
LRP6-203ENST00000538239 GAS6Q14393 721 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 ALG10BQ5I7T1 473 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 GTF2IRD2BQ6EKJ0 949 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 TLDC1Q6P9B6 456 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 ZNF782Q6ZMW2 699 aaPredicted RBP5.09□□□□□ -1.6
LRP6-203ENST00000538239 GTF2IRD2Q86UP8 949 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 ALDH16A1Q8IZ83 802 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 RNF175Q8N4F7 328 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 ACOT4Q8N9L9 421 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 OR51Q1Q8NH59 317 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 SNIP1Q8TAD8 396 aaKnown RBP5.09□□□□□ -1.6
LRP6-203ENST00000538239 WFDC5Q8TCV5 224 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 DNAJA4Q8WW22 397 aaPredicted RBP5.09□□□□□ -1.6
LRP6-203ENST00000538239 GAL3ST3Q96A11 431 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 TCTN2Q96GX1 697 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 MS4A4EQ96PG1 132 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 PIP5K1AQ99755 562 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 WDR12Q9GZL7 423 aaKnown RBP5.09□□□□□ -1.6
LRP6-203ENST00000538239 NANSQ9NR45 359 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 AIG1Q9NVV5 245 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 SLC7A8Q9UHI5 535 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 SLC7A11Q9UPY5 501 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 PLEKHM1Q9Y4G2 1056 aa5.09□□□□□ -1.6
LRP6-203ENST00000538239 PPM1BO75688 479 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 DHFRP00374 187 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 CD36P16671 472 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 ZNF43P17038 809 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 TCN2P20062 427 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 SLC15A1P46059 708 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 CEBPGP53567 150 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 KCNC4Q03721 635 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 FADDQ13158 208 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 CTC1Q2NKJ3 1217 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 LEG1Q6P5S2 330 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 PAMR1Q6UXH9 720 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 LINC00696Q6ZRV3 163 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 ZNF619Q8N2I2 560 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 ZNF565Q8N9K5 539 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 RCBTB1Q8NDN9 531 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 OR5D16Q8NGK9 328 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 GPR150Q8NGU9 434 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 FRS2Q8WU20 508 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 NXPE2Q96DL1 559 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 SLC39A13Q96H72 371 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 TMEM19Q96HH6 336 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 RBM24Q9BX46 236 aaKnown RBP5.08□□□□□ -1.6
LRP6-203ENST00000538239 TBX21Q9UL17 535 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 ZNF451Q9Y4E5 1061 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 FABP12A6NFH5 140 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 E7ESA3 106 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 KDM4BO94953 1096 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 ACPPP15309 386 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 CD46P15529 392 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 TNFRSF1BP20333 461 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 CTGFP29279 349 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 PRKCDQ05655 676 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms