RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 SCMH1Q96GD3 660 aa16.53■□□□□ 0.24
DDX55-204ENST00000536079 ZNF764Q96H86 408 aaPredicted RBP16.53■□□□□ 0.24
DDX55-204ENST00000536079 MAELQ96JY0 434 aaKnown RBP16.53■□□□□ 0.24
DDX55-204ENST00000536079 TEX37Q96LM6 180 aa16.53■□□□□ 0.24
DDX55-204ENST00000536079 ITPAQ9BY32 194 aa16.53■□□□□ 0.24
DDX55-204ENST00000536079 ASF1BQ9NVP2 202 aa16.53■□□□□ 0.24
DDX55-204ENST00000536079 NOP53Q9NZM5 478 aaKnown RBP16.53■□□□□ 0.24
DDX55-204ENST00000536079 MAP10Q9P2G4 905 aa16.53■□□□□ 0.24
DDX55-204ENST00000536079 USH1CQ9Y6N9 552 aa16.53■□□□□ 0.24
DDX55-204ENST00000536079 C2orf92A0A1B0GVN3 265 aa16.52■□□□□ 0.24
DDX55-204ENST00000536079 SP1P08047 785 aa16.52■□□□□ 0.24
DDX55-204ENST00000536079 NTSP30990 170 aa16.52■□□□□ 0.24
DDX55-204ENST00000536079 CDK9P50750 372 aaKnown RBP16.52■□□□□ 0.24
DDX55-204ENST00000536079 NME5P56597 212 aa16.52■□□□□ 0.24
DDX55-204ENST00000536079 CLDN8P56748 225 aa16.52■□□□□ 0.24
DDX55-204ENST00000536079 HSPB3Q12988 150 aa16.52■□□□□ 0.24
DDX55-204ENST00000536079 NNATQ16517 81 aa16.52■□□□□ 0.24
DDX55-204ENST00000536079 TMEM198Q66K66 360 aa16.52■□□□□ 0.24
DDX55-204ENST00000536079 OGFOD2Q6N063 350 aa16.52■□□□□ 0.24
DDX55-204ENST00000536079 SLC29A4Q7RTT9 530 aa16.52■□□□□ 0.24
DDX55-204ENST00000536079 SAMD14Q8IZD0 417 aaPredicted RBP16.52■□□□□ 0.24
DDX55-204ENST00000536079 KIRREL3Q8IZU9 778 aa16.52■□□□□ 0.24
DDX55-204ENST00000536079 CPT1CQ8TCG5 803 aa16.52■□□□□ 0.24
DDX55-204ENST00000536079 ASB15Q8WXK1 588 aa16.52■□□□□ 0.24
DDX55-204ENST00000536079 MAGED4Q96JG8 741 aa16.52■□□□□ 0.24
DDX55-204ENST00000536079 MARK4Q96L34 752 aa16.52■□□□□ 0.24
DDX55-204ENST00000536079 MAGEB18Q96M61 343 aa16.52■□□□□ 0.24
DDX55-204ENST00000536079 NXF5Q9H1B4 397 aaKnown RBP16.52■□□□□ 0.24
DDX55-204ENST00000536079 CROCCQ5TZA2 2017 aa16.52■□□□□ 0.23
DDX55-204ENST00000536079 A0A0G2JMM0 328 aa16.51■□□□□ 0.23
DDX55-204ENST00000536079 A0A1W2PPB8 328 aa16.51■□□□□ 0.23
DDX55-204ENST00000536079 A0A1W2PRS3 328 aa16.51■□□□□ 0.23
DDX55-204ENST00000536079 TRPC5OSA6NMA1 111 aa16.51■□□□□ 0.23
DDX55-204ENST00000536079 KIR3DP1A8MWS1 328 aa16.51■□□□□ 0.23
DDX55-204ENST00000536079 SLCO1B7G3V0H7 640 aa16.51■□□□□ 0.23
DDX55-204ENST00000536079 UPK1AO00322 258 aa16.51■□□□□ 0.23
DDX55-204ENST00000536079 PLOD3O60568 738 aa16.51■□□□□ 0.23
DDX55-204ENST00000536079 VPS4BO75351 444 aa16.51■□□□□ 0.23
DDX55-204ENST00000536079 SLC25A12O75746 678 aa16.51■□□□□ 0.23
DDX55-204ENST00000536079 IL12AP29459 219 aa16.51■□□□□ 0.23
DDX55-204ENST00000536079 HPCAL1P37235 193 aa16.51■□□□□ 0.23
DDX55-204ENST00000536079 ZNF791Q3KP31 576 aaPredicted RBP16.51■□□□□ 0.23
DDX55-204ENST00000536079 C6orf163Q5TEZ5 329 aa16.51■□□□□ 0.23
DDX55-204ENST00000536079 DESI1Q6ICB0 168 aa16.51■□□□□ 0.23
DDX55-204ENST00000536079 SLC25A25Q6KCM7 469 aa16.51■□□□□ 0.23
DDX55-204ENST00000536079 RPUSD3Q6P087 351 aaKnown RBP16.51■□□□□ 0.23
DDX55-204ENST00000536079 EPGNQ6UW88 154 aa16.51■□□□□ 0.23
DDX55-204ENST00000536079 GALNTL5Q7Z4T8 443 aa16.51■□□□□ 0.23
DDX55-204ENST00000536079 WDR53Q7Z5U6 358 aaPredicted RBP16.51■□□□□ 0.23
DDX55-204ENST00000536079 PRR22Q8IZ63 422 aa16.51■□□□□ 0.23
DDX55-204ENST00000536079 CYP4Z2PQ8N1L4 340 aa16.51■□□□□ 0.23
DDX55-204ENST00000536079 MIB2Q96AX9 1013 aa16.51■□□□□ 0.23
DDX55-204ENST00000536079 COQ8BQ96D53 544 aa16.51■□□□□ 0.23
DDX55-204ENST00000536079 MTERF3Q96E29 417 aa16.51■□□□□ 0.23
DDX55-204ENST00000536079 ELP4Q96EB1 424 aa16.51■□□□□ 0.23
DDX55-204ENST00000536079 THOC1Q96FV9 657 aaKnown RBP16.51■□□□□ 0.23
DDX55-204ENST00000536079 BARD1Q99728 777 aaKnown RBP16.51■□□□□ 0.23
DDX55-204ENST00000536079 DEPPQ9NTK1 212 aa16.51■□□□□ 0.23
DDX55-204ENST00000536079 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.51■□□□□ 0.23
DDX55-204ENST00000536079 ERVK-11Q9UQG0 969 aa16.51■□□□□ 0.23
DDX55-204ENST00000536079 PINLYPA6NC86 204 aa16.5■□□□□ 0.23
DDX55-204ENST00000536079 A8MVJ9 347 aa16.5■□□□□ 0.23
DDX55-204ENST00000536079 C9JVG2 144 aa16.5■□□□□ 0.23
DDX55-204ENST00000536079 PLOD2O00469 737 aa16.5■□□□□ 0.23
DDX55-204ENST00000536079 NME2P1O60361 137 aa16.5■□□□□ 0.23
DDX55-204ENST00000536079 NME2P22392 152 aa16.5■□□□□ 0.23
DDX55-204ENST00000536079 WNT3P56703 355 aa16.5■□□□□ 0.23
DDX55-204ENST00000536079 CORO7P57737 925 aa16.5■□□□□ 0.23
DDX55-204ENST00000536079 C21orf58P58505 322 aa16.5■□□□□ 0.23
DDX55-204ENST00000536079 UFM1P61960 85 aa16.5■□□□□ 0.23
DDX55-204ENST00000536079 PHC1P78364 1004 aa16.5■□□□□ 0.23
DDX55-204ENST00000536079 MAD2L1Q13257 205 aaPredicted RBP16.5■□□□□ 0.23
DDX55-204ENST00000536079 MAPKAPK3Q16644 382 aa16.5■□□□□ 0.23
DDX55-204ENST00000536079 CPTPQ5TA50 214 aa16.5■□□□□ 0.23
DDX55-204ENST00000536079 NPSR1Q6W5P4 371 aa16.5■□□□□ 0.23
DDX55-204ENST00000536079 RGS9BPQ6ZS82 235 aa16.5■□□□□ 0.23
DDX55-204ENST00000536079 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.5■□□□□ 0.23
DDX55-204ENST00000536079 OR2L13Q8N349 312 aa16.5■□□□□ 0.23
DDX55-204ENST00000536079 GRHL3Q8TE85 626 aa16.5■□□□□ 0.23
DDX55-204ENST00000536079 VSTM2LQ96N03 204 aa16.5■□□□□ 0.23
DDX55-204ENST00000536079 EBF4Q9BQW3 602 aa16.5■□□□□ 0.23
DDX55-204ENST00000536079 FOLH1BQ9HBA9 442 aa16.5■□□□□ 0.23
DDX55-204ENST00000536079 SH2D2AQ9NP31 389 aa16.5■□□□□ 0.23
DDX55-204ENST00000536079 SIRT3Q9NTG7 399 aaPredicted RBP16.5■□□□□ 0.23
DDX55-204ENST00000536079 AIG1Q9NVV5 245 aa16.5■□□□□ 0.23
DDX55-204ENST00000536079 HPF1Q9NWY4 346 aa16.5■□□□□ 0.23
DDX55-204ENST00000536079 C19orf53Q9UNZ5 99 aaPredicted RBP16.5■□□□□ 0.23
DDX55-204ENST00000536079 GPR45Q9Y5Y3 372 aa16.5■□□□□ 0.23
DDX55-204ENST00000536079 COPG1Q9Y678 874 aaKnown RBP16.5■□□□□ 0.23
DDX55-204ENST00000536079 A0A087WV62 115 aa16.49■□□□□ 0.23
DDX55-204ENST00000536079 TCP11X1B4DZS4 312 aa16.49■□□□□ 0.23
DDX55-204ENST00000536079 G3V3Y1 287 aa16.49■□□□□ 0.23
DDX55-204ENST00000536079 ATP8B1O43520 1251 aa16.49■□□□□ 0.23
DDX55-204ENST00000536079 DIAPH2O60879 1101 aa16.49■□□□□ 0.23
DDX55-204ENST00000536079 PSMG1O95456 288 aa16.49■□□□□ 0.23
DDX55-204ENST00000536079 FBXO45P0C2W1 286 aa16.49■□□□□ 0.23
DDX55-204ENST00000536079 CCL3P10147 92 aa16.49■□□□□ 0.23
DDX55-204ENST00000536079 CD46P15529 392 aa16.49■□□□□ 0.23
DDX55-204ENST00000536079 PRPS1L1P21108 318 aa16.49■□□□□ 0.23
DDX55-204ENST00000536079 IDH3AP50213 366 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms