RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 JRKO75564 520 aa7.51□□□□□ -1.21
COL21A1-212ENST00000535941 PRKRAO75569 313 aaKnown RBP7.51□□□□□ -1.21
COL21A1-212ENST00000535941 ZNF682O95780 498 aa7.51□□□□□ -1.21
COL21A1-212ENST00000535941 VIPP01282 170 aa7.51□□□□□ -1.21
COL21A1-212ENST00000535941 CTSBP07858 339 aa7.51□□□□□ -1.21
COL21A1-212ENST00000535941 ST6GAL1P15907 406 aa7.51□□□□□ -1.21
COL21A1-212ENST00000535941 ZNF182P17025 639 aaPredicted RBP7.51□□□□□ -1.21
COL21A1-212ENST00000535941 POLR2CP19387 275 aaPredicted RBP7.51□□□□□ -1.21
COL21A1-212ENST00000535941 CLK3P49761 638 aaKnown RBP7.51□□□□□ -1.21
COL21A1-212ENST00000535941 CHRNB3Q05901 458 aa7.51□□□□□ -1.21
COL21A1-212ENST00000535941 CARTPTQ16568 116 aa7.51□□□□□ -1.21
COL21A1-212ENST00000535941 SIGIRRQ6IA17 410 aa7.51□□□□□ -1.21
COL21A1-212ENST00000535941 CEP68Q76N32 757 aa7.51□□□□□ -1.21
COL21A1-212ENST00000535941 SHISA5Q8N114 240 aa7.51□□□□□ -1.21
COL21A1-212ENST00000535941 FAM162AQ96A26 154 aa7.51□□□□□ -1.21
COL21A1-212ENST00000535941 ELP4Q96EB1 424 aa7.51□□□□□ -1.21
COL21A1-212ENST00000535941 ADI1Q9BV57 179 aa7.51□□□□□ -1.21
COL21A1-212ENST00000535941 PIF1Q9H611 641 aa7.51□□□□□ -1.21
COL21A1-212ENST00000535941 UCKL1Q9NWZ5 548 aa7.51□□□□□ -1.21
COL21A1-212ENST00000535941 IFT80Q9P2H3 777 aaPredicted RBP7.51□□□□□ -1.21
COL21A1-212ENST00000535941 SPASTQ9UBP0 616 aa7.51□□□□□ -1.21
COL21A1-212ENST00000535941 SIT1Q9Y3P8 196 aa7.51□□□□□ -1.21
COL21A1-212ENST00000535941 CORINQ9Y5Q5 1042 aa7.51□□□□□ -1.21
COL21A1-212ENST00000535941 RNF103-CHMP3A0A140T963 221 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 H3BMQ9 156 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 SCAMP1O15126 338 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 ZW10O43264 779 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 HYAL3O43820 417 aaPredicted RBP7.5□□□□□ -1.21
COL21A1-212ENST00000535941 SH3BGRLO75368 114 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 MTRF1O75570 445 aaKnown RBP7.5□□□□□ -1.21
COL21A1-212ENST00000535941 CPSF4O95639 269 aaKnown RBP7.5□□□□□ -1.21
COL21A1-212ENST00000535941 ALOX5P09917 674 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 FOSL1P15407 271 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 CAPGP40121 348 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 SSR2P43308 183 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 GPR3P46089 330 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 DSTNP60981 165 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 PLIN5Q00G26 463 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 RGS1Q08116 209 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 SUZ12Q15022 739 aaKnown RBP7.5□□□□□ -1.21
COL21A1-212ENST00000535941 ABHD13Q7L211 337 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 C6orf120Q7Z4R8 191 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 IGFN1Q86VF2 1251 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 CLIP4Q8N3C7 705 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 FAM181AQ8N9Y4 354 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 HDAC2Q92769 488 aaKnown RBP7.5□□□□□ -1.21
COL21A1-212ENST00000535941 TCTN2Q96GX1 697 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 SPACA7Q96KW9 195 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 COG8Q96MW5 612 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 BARD1Q99728 777 aaKnown RBP7.5□□□□□ -1.21
COL21A1-212ENST00000535941 MACROD1Q9BQ69 325 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 C12orf4Q9NQ89 552 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 MS4A12Q9NXJ0 267 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 SH3BP4Q9P0V3 963 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 MYO15AQ9UKN7 3530 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 SCN3AQ9NY46 2000 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 TGFBR3LH3BV60 316 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 ZNF701M0R085 212 aaPredicted RBP7.5□□□□□ -1.21
COL21A1-212ENST00000535941 FFAR1O14842 300 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 FABP3P05413 133 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 ANKRD34CP0C6C1 535 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 CXCL12P48061 93 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 RAB38P57729 211 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 IL18R1Q13478 541 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 FAM53BQ14153 422 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 PRICKLE4Q2TBC4 344 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 OR2T5Q6IEZ7 315 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 WDR74Q6RFH5 385 aaPredicted RBP7.5□□□□□ -1.21
COL21A1-212ENST00000535941 ZBTB49Q6ZSB9 765 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 DGLUCYQ7Z3D6 616 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 VTCN1Q7Z7D3 282 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 ZDHHC21Q8IVQ6 265 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 OR2T29Q8NH02 315 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 FGF11Q92914 225 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 NCLNQ969V3 563 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 MED30Q96HR3 178 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 ARHGDIGQ99819 225 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 YTHDF1Q9BYJ9 559 aaKnown RBP7.5□□□□□ -1.21
COL21A1-212ENST00000535941 TP63Q9H3D4 680 aaPredicted RBP7.5□□□□□ -1.21
COL21A1-212ENST00000535941 POLR1BQ9H9Y6 1135 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 PTGFRNQ9P2B2 879 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 AURKCQ9UQB9 309 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 LYVE1Q9Y5Y7 322 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 PLOD3O60568 738 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 SRPX2O60687 465 aaPredicted RBP7.5□□□□□ -1.21
COL21A1-212ENST00000535941 ICMTO60725 284 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 BMP10O95393 424 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 GNAO1P09471 354 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 SLC35G6P0C7Q6 338 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 NR2F6P10588 404 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 FPR1P21462 350 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 TTKP33981 857 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 RYKP34925 604 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 KCNJ5P48544 419 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 DAPP51397 102 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 AFF3P51826 1226 aaKnown RBP7.5□□□□□ -1.21
COL21A1-212ENST00000535941 MAZP56270 477 aaKnown RBP7.5□□□□□ -1.21
COL21A1-212ENST00000535941 CDK6Q00534 326 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 TEKQ02763 1124 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 RPL6Q02878 288 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms