RNA–Protein interactions for RNA: ENST00000535327.5

CCDC7-207, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-207ENST00000535327 HMGCLP35914 325 aa3.26□□□□□ -1.89
CCDC7-207ENST00000535327 MDH2P40926 338 aaKnown RBP3.26□□□□□ -1.89
CCDC7-207ENST00000535327 ACADSBP45954 432 aa3.26□□□□□ -1.89
CCDC7-207ENST00000535327 NT5C2P49902 561 aa3.26□□□□□ -1.89
CCDC7-207ENST00000535327 HERV-K104P63124 156 aa3.26□□□□□ -1.89
CCDC7-207ENST00000535327 CCZ1BP86790 482 aa3.26□□□□□ -1.89
CCDC7-207ENST00000535327 CCZ1P86791 482 aaPredicted RBP3.26□□□□□ -1.89
CCDC7-207ENST00000535327 C17orf67Q0P5P2 114 aa3.26□□□□□ -1.89
CCDC7-207ENST00000535327 CBX3Q13185 183 aa3.26□□□□□ -1.89
CCDC7-207ENST00000535327 CRMP1Q14194 572 aa3.26□□□□□ -1.89
CCDC7-207ENST00000535327 SHROOM1Q2M3G4 852 aaPredicted RBP3.26□□□□□ -1.89
CCDC7-207ENST00000535327 DCAF12Q5T6F0 453 aa3.26□□□□□ -1.89
CCDC7-207ENST00000535327 HIST2H2AA3Q6FI13 130 aa3.26□□□□□ -1.89
CCDC7-207ENST00000535327 KRTAP5-7Q6L8G8 165 aa3.26□□□□□ -1.89
CCDC7-207ENST00000535327 CDC42EP5Q6NZY7 148 aa3.26□□□□□ -1.89
CCDC7-207ENST00000535327 ZNF713Q8N859 430 aaPredicted RBP3.26□□□□□ -1.89
CCDC7-207ENST00000535327 OR1K1Q8NGR3 316 aa3.26□□□□□ -1.89
CCDC7-207ENST00000535327 RDH11Q8TC12 318 aa3.26□□□□□ -1.89
CCDC7-207ENST00000535327 RNASE8Q8TDE3 154 aaKnown RBP3.26□□□□□ -1.89
CCDC7-207ENST00000535327 SIGLEC12Q96PQ1 595 aa3.26□□□□□ -1.89
CCDC7-207ENST00000535327 TEX13AQ9BXU3 409 aaPredicted RBP3.26□□□□□ -1.89
CCDC7-207ENST00000535327 PRMT8Q9NR22 394 aaPredicted RBP3.26□□□□□ -1.89
CCDC7-207ENST00000535327 SEC14L4Q9UDX3 406 aa3.26□□□□□ -1.89
CCDC7-207ENST00000535327 CIDEBQ9UHD4 219 aa3.26□□□□□ -1.89
CCDC7-207ENST00000535327 AFF2P51816 1311 aa3.25□□□□□ -1.89
CCDC7-207ENST00000535327 SYCE3A1L190 88 aa3.25□□□□□ -1.89
CCDC7-207ENST00000535327 TRIM64A6NGJ6 449 aa3.25□□□□□ -1.89
CCDC7-207ENST00000535327 TRIM64BA6NI03 449 aa3.25□□□□□ -1.89
CCDC7-207ENST00000535327 FOXI3A8MTJ6 420 aaPredicted RBP3.25□□□□□ -1.89
CCDC7-207ENST00000535327 E2F3O00716 465 aa3.25□□□□□ -1.89
CCDC7-207ENST00000535327 TNFSF11O14788 317 aa3.25□□□□□ -1.89
CCDC7-207ENST00000535327 FRAT2O75474 233 aaPredicted RBP3.25□□□□□ -1.89
CCDC7-207ENST00000535327 FCER2P06734 321 aa3.25□□□□□ -1.89
CCDC7-207ENST00000535327 APRTP07741 180 aa3.25□□□□□ -1.89
CCDC7-207ENST00000535327 FCGR3AP08637 254 aa3.25□□□□□ -1.89
CCDC7-207ENST00000535327 HIST1H2AGP0C0S8 130 aaPredicted RBP3.25□□□□□ -1.89
CCDC7-207ENST00000535327 FCARP24071 287 aa3.25□□□□□ -1.89
CCDC7-207ENST00000535327 SSTP61278 116 aa3.25□□□□□ -1.89
CCDC7-207ENST00000535327 GSG1Q2KHT4 349 aa3.25□□□□□ -1.89
CCDC7-207ENST00000535327 CNPY1Q3B7I2 92 aa3.25□□□□□ -1.89
CCDC7-207ENST00000535327 GPAT3Q53EU6 434 aa3.25□□□□□ -1.89
CCDC7-207ENST00000535327 NKAIN2Q5VXU1 208 aa3.25□□□□□ -1.89
CCDC7-207ENST00000535327 ABRAXAS1Q6UWZ7 409 aa3.25□□□□□ -1.89
CCDC7-207ENST00000535327 CWC27Q6UX04 472 aaKnown RBP3.25□□□□□ -1.89
CCDC7-207ENST00000535327 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.25□□□□□ -1.89
CCDC7-207ENST00000535327 WDR49Q8IV35 697 aa3.25□□□□□ -1.89
CCDC7-207ENST00000535327 PEX5LQ8IYB4 626 aa3.25□□□□□ -1.89
CCDC7-207ENST00000535327 LINC00518Q8N0U6 118 aa3.25□□□□□ -1.89
CCDC7-207ENST00000535327 HIST1H2ACQ93077 130 aa3.25□□□□□ -1.89
CCDC7-207ENST00000535327 ZNF560Q96MR9 790 aa3.25□□□□□ -1.89
CCDC7-207ENST00000535327 DDX47Q9H0S4 455 aaKnown RBP3.25□□□□□ -1.89
CCDC7-207ENST00000535327 MYOZ2Q9NPC6 264 aa3.25□□□□□ -1.89
CCDC7-207ENST00000535327 PIGVQ9NUD9 493 aa3.25□□□□□ -1.89
CCDC7-207ENST00000535327 DIMT1Q9UNQ2 313 aaKnown RBP3.25□□□□□ -1.89
CCDC7-207ENST00000535327 SLC9A8Q9Y2E8 581 aa3.25□□□□□ -1.89
CCDC7-207ENST00000535327 SH3PXD2BA1X283 911 aa3.24□□□□□ -1.89
CCDC7-207ENST00000535327 KRTAP4-16G5E9R7 235 aaPredicted RBP3.24□□□□□ -1.89
CCDC7-207ENST00000535327 CFLARO15519 480 aa3.24□□□□□ -1.89
CCDC7-207ENST00000535327 TSPAN2O60636 221 aa3.24□□□□□ -1.89
CCDC7-207ENST00000535327 GSTA1P08263 222 aa3.24□□□□□ -1.89
CCDC7-207ENST00000535327 ABHD2P08910 425 aa3.24□□□□□ -1.89
CCDC7-207ENST00000535327 VDRP11473 427 aa3.24□□□□□ -1.89
CCDC7-207ENST00000535327 FOSL2P15408 326 aa3.24□□□□□ -1.89
CCDC7-207ENST00000535327 ZNF17P17021 662 aa3.24□□□□□ -1.89
CCDC7-207ENST00000535327 MTIF2P46199 727 aaKnown RBP3.24□□□□□ -1.89
CCDC7-207ENST00000535327 BRCC3P46736 316 aa3.24□□□□□ -1.89
CCDC7-207ENST00000535327 SLC7A2P52569 658 aa3.24□□□□□ -1.89
CCDC7-207ENST00000535327 ABRAXAS2Q15018 415 aa3.24□□□□□ -1.89
CCDC7-207ENST00000535327 HAGHQ16775 308 aa3.24□□□□□ -1.89
CCDC7-207ENST00000535327 ITIH5Q86UX2 942 aa3.24□□□□□ -1.89
CCDC7-207ENST00000535327 UBQLNLQ8IYU4 475 aa3.24□□□□□ -1.89
CCDC7-207ENST00000535327 SFRP1Q8N474 314 aa3.24□□□□□ -1.89
CCDC7-207ENST00000535327 ZNF564Q8TBZ8 553 aaPredicted RBP3.24□□□□□ -1.89
CCDC7-207ENST00000535327 SLCO4A1Q96BD0 722 aa3.24□□□□□ -1.89
CCDC7-207ENST00000535327 RAB39BQ96DA2 213 aa3.24□□□□□ -1.89
CCDC7-207ENST00000535327 C19orf43Q9BQ61 176 aa3.24□□□□□ -1.89
CCDC7-207ENST00000535327 ZBP1Q9H171 429 aa3.24□□□□□ -1.89
CCDC7-207ENST00000535327 CXXC4Q9H2H0 198 aa3.24□□□□□ -1.89
CCDC7-207ENST00000535327 DCTPP1Q9H773 170 aa3.24□□□□□ -1.89
CCDC7-207ENST00000535327 SLC25A19Q9HC21 320 aa3.24□□□□□ -1.89
CCDC7-207ENST00000535327 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.24□□□□□ -1.89
CCDC7-207ENST00000535327 HOMER3Q9NSC5 361 aa3.24□□□□□ -1.89
CCDC7-207ENST00000535327 ABCC13Q9NSE7 274 aa3.24□□□□□ -1.89
CCDC7-207ENST00000535327 TUBGCP4Q9UGJ1 667 aa3.24□□□□□ -1.89
CCDC7-207ENST00000535327 ATG4BQ9Y4P1 393 aa3.24□□□□□ -1.89
CCDC7-207ENST00000535327 ZNF487B1APH4 448 aa3.23□□□□□ -1.89
CCDC7-207ENST00000535327 SAP18O00422 153 aaKnown RBP3.23□□□□□ -1.89
CCDC7-207ENST00000535327 ARPC1BO15143 372 aaKnown RBP3.23□□□□□ -1.89
CCDC7-207ENST00000535327 ZNF133P52736 654 aaPredicted RBP3.23□□□□□ -1.89
CCDC7-207ENST00000535327 CASP9P55211 416 aa3.23□□□□□ -1.89
CCDC7-207ENST00000535327 EXOSC7Q15024 291 aaKnown RBP3.23□□□□□ -1.89
CCDC7-207ENST00000535327 CARTPTQ16568 116 aa3.23□□□□□ -1.89
CCDC7-207ENST00000535327 STEAP1BQ6NZ63 245 aa3.23□□□□□ -1.89
CCDC7-207ENST00000535327 ZCCHC12Q6PEW1 402 aa3.23□□□□□ -1.89
CCDC7-207ENST00000535327 CCDC71Q8IV32 467 aaPredicted RBP3.23□□□□□ -1.89
CCDC7-207ENST00000535327 CNTN4Q8IWV2 1026 aa3.23□□□□□ -1.89
CCDC7-207ENST00000535327 ARL14Q8N4G2 192 aa3.23□□□□□ -1.89
CCDC7-207ENST00000535327 COLGALT1Q8NBJ5 622 aa3.23□□□□□ -1.89
CCDC7-207ENST00000535327 CHDHQ8NE62 594 aaPredicted RBP3.23□□□□□ -1.89
CCDC7-207ENST00000535327 LINC01006Q8NI28 216 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms