RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 SLC22A11Q9NSA0 550 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 IFT80Q9P2H3 777 aaPredicted RBP11.56□□□□□ -0.56
SCARB1-204ENST00000535005 EXO1Q9UQ84 846 aaKnown RBP11.56□□□□□ -0.56
SCARB1-204ENST00000535005 MAP4K5Q9Y4K4 846 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 SPACA6W5XKT8 324 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 IGLV3-12A0A075B6K2 115 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 BLACEA4D250 179 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 CYR61O00622 381 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 NME4O00746 187 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 ANGPT2O15123 496 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 DXOO77932 396 aaKnown RBP11.56□□□□□ -0.56
SCARB1-204ENST00000535005 STK17BO94768 372 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 LDLRP01130 860 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 IL3P08700 152 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 TFPTP0C1Z6 253 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 FBLP22087 321 aaKnown RBP11.56□□□□□ -0.56
SCARB1-204ENST00000535005 RPL3P39023 403 aaKnown RBP11.56□□□□□ -0.56
SCARB1-204ENST00000535005 EIF2B2P49770 351 aaKnown RBP11.56□□□□□ -0.56
SCARB1-204ENST00000535005 EEFSECP57772 596 aaKnown RBP11.56□□□□□ -0.56
SCARB1-204ENST00000535005 GABREP78334 506 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 OLR1P78380 273 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 TNFRSF17Q02223 184 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 C2orf80Q0P641 193 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 PDE7AQ13946 482 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 HEPACAMQ14CZ8 416 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 AGAP7PQ5VUJ5 663 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 COX15Q7KZN9 410 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 OVCH1Q7RTY7 1134 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 PROSER1Q86XN7 944 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 PARP8Q8N3A8 854 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 TMEM132CQ8N3T6 1108 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 GLB1L3Q8NCI6 653 aaPredicted RBP11.56□□□□□ -0.56
SCARB1-204ENST00000535005 PIK3C3Q8NEB9 887 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 OR51Q1Q8NH59 317 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.56□□□□□ -0.56
SCARB1-204ENST00000535005 C17orf50Q8WW18 174 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 STARD8Q92502 1023 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 HDAC2Q92769 488 aaKnown RBP11.56□□□□□ -0.56
SCARB1-204ENST00000535005 COL26A1Q96A83 441 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 TAMM41Q96BW9 452 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 VMP1Q96GC9 406 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 BDH2Q9BUT1 245 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 DPY30Q9C005 99 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 REEP4Q9H6H4 257 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 NANOGQ9H9S0 305 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 TEX10Q9NXF1 929 aaPredicted RBP11.56□□□□□ -0.56
SCARB1-204ENST00000535005 TAS2R7Q9NYW3 318 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 EHD3Q9NZN3 535 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 ATP6V1HQ9UI12 483 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 ANAPC2Q9UJX6 822 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 FBXW2Q9UKT8 454 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 OAZ3Q9UMX2 235 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 WASF3Q9UPY6 502 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 AURKCQ9UQB9 309 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 PCDHA9Q9Y5H5 950 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 SCN3AQ9NY46 2000 aa11.55□□□□□ -0.56
SCARB1-204ENST00000535005 C1orf226A1L170 272 aa11.55□□□□□ -0.56
SCARB1-204ENST00000535005 CDRT15L2A8MXV6 281 aa11.55□□□□□ -0.56
SCARB1-204ENST00000535005 ARPC2O15144 300 aa11.55□□□□□ -0.56
SCARB1-204ENST00000535005 SLC22A3O75751 556 aa11.55□□□□□ -0.56
SCARB1-204ENST00000535005 AIFM1O95831 613 aa11.55□□□□□ -0.56
SCARB1-204ENST00000535005 NPPAP01160 153 aa11.55□□□□□ -0.56
SCARB1-204ENST00000535005 ALBP02768 609 aa11.55□□□□□ -0.56
SCARB1-204ENST00000535005 KLK3P07288 261 aaPredicted RBP11.55□□□□□ -0.56
SCARB1-204ENST00000535005 HOXB6P17509 224 aaKnown RBP11.55□□□□□ -0.56
SCARB1-204ENST00000535005 DDCP20711 480 aa11.55□□□□□ -0.56
SCARB1-204ENST00000535005 AGXTP21549 392 aa11.55□□□□□ -0.56
SCARB1-204ENST00000535005 CPN2P22792 545 aa11.55□□□□□ -0.56
SCARB1-204ENST00000535005 CD82P27701 267 aa11.55□□□□□ -0.56
SCARB1-204ENST00000535005 RBMS1P29558 406 aaKnown RBP11.55□□□□□ -0.56
SCARB1-204ENST00000535005 TLX1P31314 330 aaPredicted RBP11.55□□□□□ -0.56
SCARB1-204ENST00000535005 BUD31P41223 144 aaPredicted RBP11.55□□□□□ -0.56
SCARB1-204ENST00000535005 HNRNPFP52597 415 aaKnown RBP11.55□□□□□ -0.56
SCARB1-204ENST00000535005 UFM1P61960 85 aa11.55□□□□□ -0.56
SCARB1-204ENST00000535005 MAT1AQ00266 395 aaKnown RBP11.55□□□□□ -0.56
SCARB1-204ENST00000535005 FXNQ16595 210 aa11.55□□□□□ -0.56
SCARB1-204ENST00000535005 NDUFAF5Q5TEU4 345 aa11.55□□□□□ -0.56
SCARB1-204ENST00000535005 ARHGAP40Q5TG30 622 aa11.55□□□□□ -0.56
SCARB1-204ENST00000535005 IGFN1Q86VF2 1251 aa11.55□□□□□ -0.56
SCARB1-204ENST00000535005 METTL27Q8N6F8 245 aaPredicted RBP11.55□□□□□ -0.56
SCARB1-204ENST00000535005 CLHC1Q8NHS4 586 aa11.55□□□□□ -0.56
SCARB1-204ENST00000535005 FKBP10Q96AY3 582 aa11.55□□□□□ -0.56
SCARB1-204ENST00000535005 TESCQ96BS2 214 aa11.55□□□□□ -0.56
SCARB1-204ENST00000535005 OR1F2PQ96R84 312 aa11.55□□□□□ -0.56
SCARB1-204ENST00000535005 TGIF2Q9GZN2 237 aa11.55□□□□□ -0.56
SCARB1-204ENST00000535005 SLC26A1Q9H2B4 701 aa11.55□□□□□ -0.56
SCARB1-204ENST00000535005 MKKSQ9NPJ1 570 aaPredicted RBP11.55□□□□□ -0.56
SCARB1-204ENST00000535005 HCN3Q9P1Z3 774 aa11.55□□□□□ -0.56
SCARB1-204ENST00000535005 ACSL6Q9UKU0 697 aa11.55□□□□□ -0.56
SCARB1-204ENST00000535005 MAU2Q9Y6X3 613 aa11.55□□□□□ -0.56
SCARB1-204ENST00000535005 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.54□□□□□ -0.56
SCARB1-204ENST00000535005 EI24O14681 340 aa11.54□□□□□ -0.56
SCARB1-204ENST00000535005 SCAMP2O15127 329 aaKnown RBP11.54□□□□□ -0.56
SCARB1-204ENST00000535005 FURINP09958 794 aa11.54□□□□□ -0.56
SCARB1-204ENST00000535005 NR2F6P10588 404 aa11.54□□□□□ -0.56
SCARB1-204ENST00000535005 CD247P20963 164 aa11.54□□□□□ -0.56
SCARB1-204ENST00000535005 HPCAL1P37235 193 aa11.54□□□□□ -0.56
SCARB1-204ENST00000535005 SHC2P98077 582 aa11.54□□□□□ -0.56
SCARB1-204ENST00000535005 MC1RQ01726 317 aa11.54□□□□□ -0.56
SCARB1-204ENST00000535005 COL9A2Q14055 689 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms