RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 ZDHHC20Q5W0Z9 365 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 ZNF449Q6P9G9 518 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 PLEKHM3Q6ZWE6 761 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 ZNF550Q7Z398 422 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 VN1R4Q7Z5H5 301 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 MTERF4Q7Z6M4 381 aaKnown RBP2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 KIAA1328Q86T90 577 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 CCDC50Q8IVM0 306 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 ZNF567Q8N184 647 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 TMEM156Q8N614 296 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 ZNF321PQ8N8H1 164 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 APCDD1LQ8NCL9 501 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 PLPP5Q8NEB5 264 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 NEK11Q8NG66 645 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 ZCCHC10Q8TBK6 192 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 DOK4Q8TEW6 326 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 NRG4Q8WWG1 115 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 HTRA1Q92743 480 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 NEUROG1Q92886 237 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 ULK4Q96C45 1275 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 HAUS1Q96CS2 278 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 FAF2Q96CS3 445 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 MVB12AQ96EY5 273 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 LRGUKQ96M69 825 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 C16orf45Q96MC5 204 aaPredicted RBP2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 PRAP1Q96NZ9 151 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 FCRL5Q96RD9 977 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 TRIB1Q96RU8 372 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 SARGQ9BW04 601 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 TRIM5Q9C035 493 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 AMBRA1Q9C0C7 1298 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 RHBGQ9H310 441 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 TRABDQ9H4I3 376 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 HAUS4Q9H6D7 363 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 MANSC1Q9H8J5 431 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 IL1RL2Q9HB29 575 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 NRIP3Q9NQ35 241 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 ZNF701Q9NV72 531 aaPredicted RBP2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 B4GALT7Q9UBV7 327 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 ZNF629Q9UEG4 869 aaPredicted RBP2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 C19orf25Q9UFG5 118 aaPredicted RBP2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 PCYOX1Q9UHG3 505 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 HOOK1Q9UJC3 728 aaKnown RBP2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 TTC7AQ9ULT0 858 aaPredicted RBP2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 LAMP3Q9UQV4 416 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 SLC6A5Q9Y345 797 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 NAALAD2Q9Y3Q0 740 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 FAM169AQ9Y6X4 670 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 V9GYY5 206 aaPredicted RBP2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 KIAA1549Q9HCM3 1950 aa2.7□□□□□ -1.98
CHMP4A-208ENST00000534106 NUP210LQ5VU65 1888 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 IGHV4-30-2A0A087WSY4 118 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 C15orf38-AP3S2A0A0A6YYH1 394 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 TRBV5-4A0A0C4DH59 114 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 CCDC162PA2VCL2 907 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 LRRD1A4D1F6 860 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 CTAGE15A4D2H0 777 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 CDHR4A6H8M9 788 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 C5orf60A6NFR6 353 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 ERICH4A6NGS2 130 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 A8MVJ9 347 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 MAGEB17A8MXT2 336 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 E7ENX8 843 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 H3BML4 177 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 FCHO1O14526 889 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 PRPF4O43172 522 aaKnown RBP eCLIP2.69□□□□□ -1.984e-7■□□□□ 10.7
CHMP4A-208ENST00000534106 GPC4O75487 556 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 TRAPPC6AO75865 159 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 VENTXO95231 258 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 C1orf105O95561 183 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 IGHV4-39P01824 125 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 TUBB4AP04350 444 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 TPM3P06753 285 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 SOD3P08294 240 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 F7P08709 466 aaPredicted RBP2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 TMIGD3P0DMS9 266 aaPredicted RBP2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 TNNT1P13805 278 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 PAX1P15863 534 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 PECAM1P16284 738 aaPredicted RBP2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 ITGALP20701 1170 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 FPR1P21462 350 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 DPP4P27487 766 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 CMPK1P30085 196 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 ADRA1AP35348 466 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 TIMP3P35625 211 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 COILP38432 576 aaPredicted RBP2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 PEX19P40855 299 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 HNF4AP41235 474 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 CPA2P48052 419 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 SSR4P51571 173 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 GPR143P51810 404 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 TPM4P67936 248 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 TAP2Q03519 686 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 UBXN1Q04323 297 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 SRYQ05066 204 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 MGAT2Q10469 447 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 FAM53BQ14153 422 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 PIGHQ14442 188 aaPredicted RBP2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 SEMA3AQ14563 771 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms