RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 SEC22BO75396 215 aa8.06□□□□□ -1.12
COPB1-210ENST00000533533 SKAP2O75563 359 aaPredicted RBP8.06□□□□□ -1.12
COPB1-210ENST00000533533 LYPLA1O75608 230 aaPredicted RBP8.06□□□□□ -1.12
COPB1-210ENST00000533533 ERAL1O75616 437 aaKnown RBP8.06□□□□□ -1.12
COPB1-210ENST00000533533 TOXO94900 526 aa8.06□□□□□ -1.12
COPB1-210ENST00000533533 SERPINE1P05121 402 aa8.06□□□□□ -1.12
COPB1-210ENST00000533533 ANXA4P09525 319 aaPredicted RBP8.06□□□□□ -1.12
COPB1-210ENST00000533533 ALOX15P16050 662 aaPredicted RBP8.06□□□□□ -1.12
COPB1-210ENST00000533533 MSX1P28360 303 aa8.06□□□□□ -1.12
COPB1-210ENST00000533533 TIA1P31483 386 aaKnown RBP eCLIP8.06□□□□□ -1.12
COPB1-210ENST00000533533 CLCN2P51788 898 aa8.06□□□□□ -1.12
COPB1-210ENST00000533533 PLIN5Q00G26 463 aa8.06□□□□□ -1.12
COPB1-210ENST00000533533 MPP2Q14168 576 aa8.06□□□□□ -1.12
COPB1-210ENST00000533533 ELAVL1Q15717 326 aaKnown RBP8.06□□□□□ -1.12
COPB1-210ENST00000533533 GALNTL6Q49A17 601 aa8.06□□□□□ -1.12
COPB1-210ENST00000533533 TNFAIP8L3Q5GJ75 292 aa8.06□□□□□ -1.12
COPB1-210ENST00000533533 NDUFAF5Q5TEU4 345 aa8.06□□□□□ -1.12
COPB1-210ENST00000533533 C6orf163Q5TEZ5 329 aa8.06□□□□□ -1.12
COPB1-210ENST00000533533 OR52E8Q6IFG1 317 aa8.06□□□□□ -1.12
COPB1-210ENST00000533533 MRM1Q6IN84 353 aaKnown RBP8.06□□□□□ -1.12
COPB1-210ENST00000533533 ARHGAP11AQ6P4F7 1023 aa8.06□□□□□ -1.12
COPB1-210ENST00000533533 DMRTC2Q8IXT2 367 aaPredicted RBP8.06□□□□□ -1.12
COPB1-210ENST00000533533 CLYBLQ8N0X4 340 aa8.06□□□□□ -1.12
COPB1-210ENST00000533533 MMP21Q8N119 569 aa8.06□□□□□ -1.12
COPB1-210ENST00000533533 CYP4Z2PQ8N1L4 340 aa8.06□□□□□ -1.12
COPB1-210ENST00000533533 ZFP62Q8NB50 900 aaPredicted RBP8.06□□□□□ -1.12
COPB1-210ENST00000533533 NFAM1Q8NET5 270 aaPredicted RBP8.06□□□□□ -1.12
COPB1-210ENST00000533533 B3GNT7Q8NFL0 401 aa8.06□□□□□ -1.12
COPB1-210ENST00000533533 C16orf52Q8NHV5 167 aa8.06□□□□□ -1.12
COPB1-210ENST00000533533 TWIST2Q8WVJ9 160 aa8.06□□□□□ -1.12
COPB1-210ENST00000533533 RND1Q92730 232 aa8.06□□□□□ -1.12
COPB1-210ENST00000533533 DAZLQ92904 295 aaKnown RBP8.06□□□□□ -1.12
COPB1-210ENST00000533533 NCLNQ969V3 563 aa8.06□□□□□ -1.12
COPB1-210ENST00000533533 ANKRD9Q96BM1 317 aaPredicted RBP8.06□□□□□ -1.12
COPB1-210ENST00000533533 ARL8AQ96BM9 186 aa8.06□□□□□ -1.12
COPB1-210ENST00000533533 CNPPD1Q9BV87 410 aa8.06□□□□□ -1.12
COPB1-210ENST00000533533 UCK2Q9BZX2 261 aa8.06□□□□□ -1.12
COPB1-210ENST00000533533 TP63Q9H3D4 680 aaPredicted RBP8.06□□□□□ -1.12
COPB1-210ENST00000533533 KCNJ16Q9NPI9 418 aa8.06□□□□□ -1.12
COPB1-210ENST00000533533 MCM8Q9UJA3 840 aa8.06□□□□□ -1.12
COPB1-210ENST00000533533 POLR3HQ9Y535 204 aaPredicted RBP8.06□□□□□ -1.12
COPB1-210ENST00000533533 C1orf226A1L170 272 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 SYNDIG1LA6NDD5 238 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 PIP5K1BO14986 540 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 ITM2AO43736 263 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 PDE9AO76083 593 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 NADKO95544 446 aaPredicted RBP8.05□□□□□ -1.12
COPB1-210ENST00000533533 GPR75O95800 540 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 IL3P08700 152 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 HOXD4P09016 255 aaPredicted RBP8.05□□□□□ -1.12
COPB1-210ENST00000533533 H2AFXP16104 143 aaPredicted RBP8.05□□□□□ -1.12
COPB1-210ENST00000533533 NT5EP21589 574 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 DNAJA1P31689 397 aaKnown RBP8.05□□□□□ -1.12
COPB1-210ENST00000533533 SERPINB5P36952 375 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 FEN1P39748 380 aaKnown RBP8.05□□□□□ -1.12
COPB1-210ENST00000533533 STT3AP46977 705 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 SLC1A6P48664 564 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 XKP51811 444 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 GPR85P60893 370 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 ABCE1P61221 599 aaKnown RBP8.05□□□□□ -1.12
COPB1-210ENST00000533533 RPL38P63173 70 aaKnown RBP8.05□□□□□ -1.12
COPB1-210ENST00000533533 C2orf80Q0P641 193 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 STX3Q13277 289 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 ZNF267Q14586 743 aaPredicted RBP8.05□□□□□ -1.12
COPB1-210ENST00000533533 EMC4Q5J8M3 183 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 AGBL2Q5U5Z8 902 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 CES4AQ5XG92 561 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 KANK2Q63ZY3 851 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 FAM180BQ6P0A1 224 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 MDGA2Q7Z553 956 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 TMEM200AQ86VY9 491 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 CCDC71Q8IV32 467 aaPredicted RBP8.05□□□□□ -1.12
COPB1-210ENST00000533533 RPRMLQ8N4K4 120 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 TMEM156Q8N614 296 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 APCDD1LQ8NCL9 501 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 C7orf57Q8NEG2 295 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 OR4K14Q8NGD5 310 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 OR52N2Q8NGI0 321 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 OR14A16Q8NHC5 309 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 C16orf78Q8WTQ4 265 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 TM4SF18Q96CE8 201 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 KLHL29Q96CT2 875 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 VMP1Q96GC9 406 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 PPP1R36Q96LQ0 422 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 ZNF559Q9BR84 538 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 PELOQ9BRX2 385 aaKnown RBP8.05□□□□□ -1.12
COPB1-210ENST00000533533 ZNF395Q9H8N7 513 aaPredicted RBP8.05□□□□□ -1.12
COPB1-210ENST00000533533 LRTM1Q9HBL6 345 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 COPS7AQ9UBW8 275 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 VTI1BQ9UEU0 232 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 KCNN3Q9UGI6 736 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 ZDHHC2Q9UIJ5 367 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 PSME2Q9UL46 239 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 DLGAP4Q9Y2H0 992 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 PCDHA9Q9Y5H5 950 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 ZNF780BQ9Y6R6 833 aa8.05□□□□□ -1.12
COPB1-210ENST00000533533 UQCRHLA0A096LP55 91 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 ATP6AP2A0A1C7CYW4 349 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 A0A1W2PS29 197 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 SERTM1A2A2V5 107 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms