RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 PAIP2Q9BPZ3 127 aaKnown RBP18.88■□□□□ 0.61
CCS-208ENST00000533244 CFL2Q9Y281 166 aa18.88■□□□□ 0.61
CCS-208ENST00000533244 PEX1O43933 1283 aa18.87■□□□□ 0.61
CCS-208ENST00000533244 PLOD3O60568 738 aa18.87■□□□□ 0.61
CCS-208ENST00000533244 PEX11AO75192 247 aa18.87■□□□□ 0.61
CCS-208ENST00000533244 MEOX1P50221 254 aa18.87■□□□□ 0.61
CCS-208ENST00000533244 EMDP50402 254 aa18.87■□□□□ 0.61
CCS-208ENST00000533244 RPL14P50914 215 aaKnown RBP18.87■□□□□ 0.61
CCS-208ENST00000533244 ATP6AP1LQ52LC2 224 aa18.87■□□□□ 0.61
CCS-208ENST00000533244 FHL5Q5TD97 284 aa18.87■□□□□ 0.61
CCS-208ENST00000533244 SIAH3Q8IW03 269 aa18.87■□□□□ 0.61
CCS-208ENST00000533244 ZFP62Q8NB50 900 aaPredicted RBP18.87■□□□□ 0.61
CCS-208ENST00000533244 OR52R1Q8NGF1 315 aa18.87■□□□□ 0.61
CCS-208ENST00000533244 RAB3IL1Q8TBN0 382 aa18.87■□□□□ 0.61
CCS-208ENST00000533244 TSSK3Q96PN8 268 aa18.87■□□□□ 0.61
CCS-208ENST00000533244 BBS4Q96RK4 519 aa18.87■□□□□ 0.61
CCS-208ENST00000533244 SH3GL2Q99962 352 aa18.87■□□□□ 0.61
CCS-208ENST00000533244 REEP4Q9H6H4 257 aa18.87■□□□□ 0.61
CCS-208ENST00000533244 VIPAS39Q9H9C1 493 aa18.87■□□□□ 0.61
CCS-208ENST00000533244 DEPPQ9NTK1 212 aa18.87■□□□□ 0.61
CCS-208ENST00000533244 NKIRAS1Q9NYS0 192 aa18.87■□□□□ 0.61
CCS-208ENST00000533244 BAIAP2L1Q9UHR4 511 aa18.87■□□□□ 0.61
CCS-208ENST00000533244 KLRC4-KLRK1H3BQV0 150 aa18.86■□□□□ 0.61
CCS-208ENST00000533244 SNNO75324 88 aaPredicted RBP18.86■□□□□ 0.61
CCS-208ENST00000533244 BCAS2O75934 225 aaPredicted RBP18.86■□□□□ 0.61
CCS-208ENST00000533244 WISP2O76076 250 aa18.86■□□□□ 0.61
CCS-208ENST00000533244 SLITRK5O94991 958 aa18.86■□□□□ 0.61
CCS-208ENST00000533244 MAPK1P28482 360 aa18.86■□□□□ 0.61
CCS-208ENST00000533244 ASMTP46597 345 aa18.86■□□□□ 0.61
CCS-208ENST00000533244 NR0B1P51843 470 aaKnown RBP18.86■□□□□ 0.61
CCS-208ENST00000533244 SRSF11Q05519 484 aaKnown RBP18.86■□□□□ 0.61
CCS-208ENST00000533244 EIF2S3LQ2VIR3 472 aaKnown RBP18.86■□□□□ 0.61
CCS-208ENST00000533244 RNFT1Q5M7Z0 435 aa18.86■□□□□ 0.61
CCS-208ENST00000533244 HLA-DQA1Q5Y7H0 255 aa18.86■□□□□ 0.61
CCS-208ENST00000533244 HDXQ7Z353 690 aa18.86■□□□□ 0.61
CCS-208ENST00000533244 TAGAPQ8N103 731 aa18.86■□□□□ 0.61
CCS-208ENST00000533244 MGARPQ8TDB4 240 aa18.86■□□□□ 0.61
CCS-208ENST00000533244 PAQR8Q8TEZ7 354 aa18.86■□□□□ 0.61
CCS-208ENST00000533244 KAT2AQ92830 837 aa18.86■□□□□ 0.61
CCS-208ENST00000533244 MTERF3Q96E29 417 aa18.86■□□□□ 0.61
CCS-208ENST00000533244 AMDHD1Q96NU7 426 aa18.86■□□□□ 0.61
CCS-208ENST00000533244 ITPAQ9BY32 194 aa18.86■□□□□ 0.61
CCS-208ENST00000533244 BCAP29Q9UHQ4 241 aa18.86■□□□□ 0.61
CCS-208ENST00000533244 ZGRF1Q86YA3 2104 aa18.85■□□□□ 0.61
CCS-208ENST00000533244 A0A087WV62 115 aa18.85■□□□□ 0.61
CCS-208ENST00000533244 IFI6P09912 130 aa18.85■□□□□ 0.61
CCS-208ENST00000533244 CCL3P10147 92 aa18.85■□□□□ 0.61
CCS-208ENST00000533244 NTSP30990 170 aa18.85■□□□□ 0.61
CCS-208ENST00000533244 NCBP2P52298 156 aaKnown RBP eCLIP18.85■□□□□ 0.617e-7■□□□□ 10.9
CCS-208ENST00000533244 ALDH6A1Q02252 535 aaKnown RBP18.85■□□□□ 0.61
CCS-208ENST00000533244 PDCD2Q16342 344 aaPredicted RBP18.85■□□□□ 0.61
CCS-208ENST00000533244 NTRK2Q16620 822 aa18.85■□□□□ 0.61
CCS-208ENST00000533244 SMU1Q2TAY7 513 aa18.85■□□□□ 0.61
CCS-208ENST00000533244 ZNF385BQ569K4 471 aa18.85■□□□□ 0.61
CCS-208ENST00000533244 TTMPQ5BVD1 217 aa18.85■□□□□ 0.61
CCS-208ENST00000533244 OR7G2Q8NG99 324 aa18.85■□□□□ 0.61
CCS-208ENST00000533244 CLHC1Q8NHS4 586 aa18.85■□□□□ 0.61
CCS-208ENST00000533244 GFM2Q969S9 779 aaKnown RBP18.85■□□□□ 0.61
CCS-208ENST00000533244 TUBGCP3Q96CW5 907 aa18.85■□□□□ 0.61
CCS-208ENST00000533244 ATP6V1G3Q96LB4 118 aa18.85■□□□□ 0.61
CCS-208ENST00000533244 NXF5Q9H1B4 397 aaKnown RBP18.85■□□□□ 0.61
CCS-208ENST00000533244 GLIPR2Q9H4G4 154 aa18.85■□□□□ 0.61
CCS-208ENST00000533244 ANKRA2Q9H9E1 313 aa18.85■□□□□ 0.61
CCS-208ENST00000533244 PRODH2Q9UF12 536 aa18.85■□□□□ 0.61
CCS-208ENST00000533244 PINLYPA6NC86 204 aa18.84■□□□□ 0.61
CCS-208ENST00000533244 PLOD2O00469 737 aa18.84■□□□□ 0.61
CCS-208ENST00000533244 ZNF24P17028 368 aa18.84■□□□□ 0.61
CCS-208ENST00000533244 FRKP42685 505 aaPredicted RBP18.84■□□□□ 0.61
CCS-208ENST00000533244 GPR85P60893 370 aa18.84■□□□□ 0.61
CCS-208ENST00000533244 ELOAQ14241 798 aaKnown RBP18.84■□□□□ 0.61
CCS-208ENST00000533244 LIX1Q8N485 282 aa18.84■□□□□ 0.61
CCS-208ENST00000533244 FNDC5Q8NAU1 212 aa18.84■□□□□ 0.61
CCS-208ENST00000533244 OR2M7Q8NG81 312 aa18.84■□□□□ 0.61
CCS-208ENST00000533244 GPR137Q96N19 417 aa18.84■□□□□ 0.61
CCS-208ENST00000533244 SACM1LQ9NTJ5 587 aa18.84■□□□□ 0.61
CCS-208ENST00000533244 THAP1Q9NVV9 213 aa18.84■□□□□ 0.61
CCS-208ENST00000533244 ASIC5Q9NY37 505 aa18.84■□□□□ 0.61
CCS-208ENST00000533244 ATP6V1HQ9UI12 483 aa18.84■□□□□ 0.61
CCS-208ENST00000533244 NPFFR2Q9Y5X5 522 aa18.84■□□□□ 0.61
CCS-208ENST00000533244 CHCHD2Q9Y6H1 151 aaPredicted RBP18.84■□□□□ 0.61
CCS-208ENST00000533244 EXPH5Q8NEV8 1989 aa18.84■□□□□ 0.61
CCS-208ENST00000533244 A0A0G2JMM0 328 aa18.83■□□□□ 0.61
CCS-208ENST00000533244 A0A1W2PPB8 328 aa18.83■□□□□ 0.61
CCS-208ENST00000533244 A0A1W2PRS3 328 aa18.83■□□□□ 0.61
CCS-208ENST00000533244 KIR3DP1A8MWS1 328 aa18.83■□□□□ 0.61
CCS-208ENST00000533244 AKAP10O43572 662 aa18.83■□□□□ 0.61
CCS-208ENST00000533244 LRATO95237 230 aa18.83■□□□□ 0.61
CCS-208ENST00000533244 PSMG1O95456 288 aa18.83■□□□□ 0.61
CCS-208ENST00000533244 PRPS2P11908 318 aa18.83■□□□□ 0.61
CCS-208ENST00000533244 CNR1P21554 472 aa18.83■□□□□ 0.61
CCS-208ENST00000533244 PPICP45877 212 aa18.83■□□□□ 0.61
CCS-208ENST00000533244 DCAF7P61962 342 aa18.83■□□□□ 0.61
CCS-208ENST00000533244 IL23RQ5VWK5 629 aa18.83■□□□□ 0.61
CCS-208ENST00000533244 ANKRD26P1Q6NSI1 321 aa18.83■□□□□ 0.61
CCS-208ENST00000533244 FAM26EQ8N5C1 309 aa18.83■□□□□ 0.61
CCS-208ENST00000533244 OR10G3Q8NGC4 313 aa18.83■□□□□ 0.61
CCS-208ENST00000533244 PPCDCQ96CD2 204 aa18.83■□□□□ 0.61
CCS-208ENST00000533244 LCORQ96JN0 433 aaPredicted RBP18.83■□□□□ 0.61
CCS-208ENST00000533244 VSTM2LQ96N03 204 aa18.83■□□□□ 0.61
CCS-208ENST00000533244 BTBD9Q96Q07 612 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms