RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 ALCAMQ13740 583 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 ARHGEF7Q14155 803 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 IRF4Q15306 451 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 PSG3Q16557 428 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 ZNF311Q5JNZ3 666 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 AVPI1Q5T686 147 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 GPRC6AQ5T6X5 926 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 METRNLQ641Q3 311 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 DHRS7BQ6IAN0 325 aaPredicted RBP5.21□□□□□ -1.58
CD44-236ENST00000533222 USP17L6PQ6QN14 398 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 UQCC3Q6UW78 93 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 ZDHHC24Q6UX98 284 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 ANGPTL5Q86XS5 388 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 DENND1CQ8IV53 801 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 MISPQ8IVT2 679 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 FOXRED2Q8IWF2 684 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 OR13D1Q8NGV5 346 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 OR51A7Q8NH64 312 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 IL17DQ8TAD2 202 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 DYNC2LI1Q8TCX1 351 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 CHURC1Q8WUH1 139 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 XAGE5Q8WWM1 108 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 EXTL1Q92935 676 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 DVL3Q92997 716 aaPredicted RBP5.21□□□□□ -1.58
CD44-236ENST00000533222 HGDQ93099 445 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 PSMG2Q969U7 264 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 PABPC5Q96DU9 382 aaKnown RBP5.21□□□□□ -1.58
CD44-236ENST00000533222 RAB3CQ96E17 227 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 C1GALT1C1Q96EU7 318 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 KAZALD1Q96I82 304 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 MS4A14Q96JA4 679 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 Q96MT0 163 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 ZNF48Q96MX3 618 aaPredicted RBP5.21□□□□□ -1.58
CD44-236ENST00000533222 LGMNQ99538 433 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 PRRX2Q99811 253 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 THTPAQ9BU02 230 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 C1orf43Q9BWL3 253 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 ERVK-6Q9BXR3 956 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 REG4Q9BYZ8 158 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 TRIM31Q9BZY9 425 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 ZNF436Q9C0F3 470 aaPredicted RBP5.21□□□□□ -1.58
CD44-236ENST00000533222 NMUR2Q9GZQ4 415 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 DCSTAMPQ9H295 470 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 TTYH1Q9H313 450 aaPredicted RBP5.21□□□□□ -1.58
CD44-236ENST00000533222 DSN1Q9H410 356 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 FAM83DQ9H4H8 585 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 ARMT1Q9H993 441 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 COPS7BQ9H9Q2 264 aaPredicted RBP5.21□□□□□ -1.58
CD44-236ENST00000533222 POLR1BQ9H9Y6 1135 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 CACYBPQ9HB71 228 aaKnown RBP5.21□□□□□ -1.58
CD44-236ENST00000533222 FBRSL1Q9HCM7 1045 aaKnown RBP5.21□□□□□ -1.58
CD44-236ENST00000533222 KRT84Q9NSB2 600 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 NINJ2Q9NZG7 142 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 SEC14L4Q9UDX3 406 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 NAGKQ9UJ70 344 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 STAP1Q9ULZ2 295 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 AAR2Q9Y312 384 aaKnown RBP5.21□□□□□ -1.58
CD44-236ENST00000533222 MRPS18CQ9Y3D5 142 aaKnown RBP5.21□□□□□ -1.58
CD44-236ENST00000533222 DISP2A7MBM2 1401 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 SPATA31A1Q5TZJ5 1347 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 SPATA31A5Q5VU36 1347 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 SPATA31A7Q8IWB4 1347 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 PXDNLA1KZ92 1463 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 METP08581 1390 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 A0A1W2PPL8 197 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 SLC5A10A0PJK1 596 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 KRTAP23-1A1A580 65 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 GLTPD2A6NH11 291 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 CLDN24A6NM45 220 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 PMM2O15305 246 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 MID1O15344 667 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 B3GALT2O43825 422 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 TYROBPO43914 113 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 GMFGO60234 142 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 FAM20BO75063 409 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 AKAP3O75969 853 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 TBX18O95935 607 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 MT-CYBP00156 380 aaPredicted RBP5.2□□□□□ -1.58
CD44-236ENST00000533222 LDLRP01130 860 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 IL1AP01583 271 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 OR2T7P0C7T2 308 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 SCGB1A1P11684 91 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 F3P13726 295 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 NDUFB7P17568 137 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 CBLP22681 906 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 G0S2P27469 103 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 HTR1BP28222 390 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 PRDX5P30044 214 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 BDKRB2P30411 391 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 OR1E1P30953 314 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 TGFBR2P37173 567 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 IL15P40933 162 aaPredicted RBP5.2□□□□□ -1.58
CD44-236ENST00000533222 SLC1A2P43004 574 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 GABRB2P47870 512 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 HTR5AP47898 357 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 CSNK1EP49674 416 aaKnown RBP5.2□□□□□ -1.58
CD44-236ENST00000533222 ERFP50548 548 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 LUMP51884 338 aaPredicted RBP5.2□□□□□ -1.58
CD44-236ENST00000533222 EMP2P54851 167 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 WNT4P56705 351 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms