RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 CNR1P21554 472 aa14.17□□□□□ -0.14
CPSF1-210ENST00000532935 GPX3P22352 226 aa14.17□□□□□ -0.14
CPSF1-210ENST00000532935 ARRB2P32121 409 aa14.17□□□□□ -0.14
CPSF1-210ENST00000532935 SERPINB4P48594 390 aa14.17□□□□□ -0.14
CPSF1-210ENST00000532935 MRPS35P82673 323 aaKnown RBP14.17□□□□□ -0.14
CPSF1-210ENST00000532935 DUSP8Q13202 625 aa14.17□□□□□ -0.14
CPSF1-210ENST00000532935 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.17□□□□□ -0.14
CPSF1-210ENST00000532935 UGT3A2Q3SY77 523 aa14.17□□□□□ -0.14
CPSF1-210ENST00000532935 TRMT12Q53H54 448 aaKnown RBP14.17□□□□□ -0.14
CPSF1-210ENST00000532935 ZNF628Q5EBL2 1059 aa14.17□□□□□ -0.14
CPSF1-210ENST00000532935 SH2D4BQ5SQS7 431 aa14.17□□□□□ -0.14
CPSF1-210ENST00000532935 BNC2Q6ZN30 1099 aaPredicted RBP14.17□□□□□ -0.14
CPSF1-210ENST00000532935 FAM47EQ6ZV65 393 aa14.17□□□□□ -0.14
CPSF1-210ENST00000532935 FJX1Q86VR8 437 aa14.17□□□□□ -0.14
CPSF1-210ENST00000532935 NUDCD3Q8IVD9 361 aa14.17□□□□□ -0.14
CPSF1-210ENST00000532935 GHDCQ8N2G8 530 aa14.17□□□□□ -0.14
CPSF1-210ENST00000532935 SIMC1Q8NDZ2 872 aa14.17□□□□□ -0.14
CPSF1-210ENST00000532935 C17orf47Q8NEP4 570 aa14.17□□□□□ -0.14
CPSF1-210ENST00000532935 OR52R1Q8NGF1 315 aa14.17□□□□□ -0.14
CPSF1-210ENST00000532935 OR9A2Q8NGT5 310 aa14.17□□□□□ -0.14
CPSF1-210ENST00000532935 AGR3Q8TD06 166 aa14.17□□□□□ -0.14
CPSF1-210ENST00000532935 ZNF675Q8TD23 568 aa14.17□□□□□ -0.14
CPSF1-210ENST00000532935 TWIST2Q8WVJ9 160 aa14.17□□□□□ -0.14
CPSF1-210ENST00000532935 MAGED4Q96JG8 741 aa14.17□□□□□ -0.14
CPSF1-210ENST00000532935 FAM173AQ9BQD7 235 aa14.17□□□□□ -0.14
CPSF1-210ENST00000532935 MIEF1Q9NQG6 463 aa14.17□□□□□ -0.14
CPSF1-210ENST00000532935 CFL2Q9Y281 166 aa14.17□□□□□ -0.14
CPSF1-210ENST00000532935 DTX4Q9Y2E6 619 aa14.17□□□□□ -0.14
CPSF1-210ENST00000532935 ACTL7BQ9Y614 415 aa14.17□□□□□ -0.14
CPSF1-210ENST00000532935 PCNX1Q96RV3 2341 aa14.16□□□□□ -0.14
CPSF1-210ENST00000532935 TRGV8A0A0C4DH27 118 aa14.16□□□□□ -0.14
CPSF1-210ENST00000532935 PIP5K1BO14986 540 aa14.16□□□□□ -0.14
CPSF1-210ENST00000532935 TM9SF1O15321 606 aa14.16□□□□□ -0.14
CPSF1-210ENST00000532935 HS6ST1O60243 411 aa14.16□□□□□ -0.14
CPSF1-210ENST00000532935 SLC19A2O60779 497 aa14.16□□□□□ -0.14
CPSF1-210ENST00000532935 MYZAPP0CAP1 466 aa14.16□□□□□ -0.14
CPSF1-210ENST00000532935 TACR1P25103 407 aa14.16□□□□□ -0.14
CPSF1-210ENST00000532935 PER3P56645 1201 aa14.16□□□□□ -0.14
CPSF1-210ENST00000532935 NRG3P56975 720 aa14.16□□□□□ -0.14
CPSF1-210ENST00000532935 PPIAP62937 165 aaKnown RBP14.16□□□□□ -0.14
CPSF1-210ENST00000532935 HSF1Q00613 529 aa14.16□□□□□ -0.14
CPSF1-210ENST00000532935 PLGLB1Q02325 96 aa14.16□□□□□ -0.14
CPSF1-210ENST00000532935 CEBPEQ15744 281 aa14.16□□□□□ -0.14
CPSF1-210ENST00000532935 NTRK2Q16620 822 aa14.16□□□□□ -0.14
CPSF1-210ENST00000532935 PRSS53Q2L4Q9 553 aa14.16□□□□□ -0.14
CPSF1-210ENST00000532935 SLC22A10Q63ZE4 541 aa14.16□□□□□ -0.14
CPSF1-210ENST00000532935 TMEM64Q6YI46 380 aa14.16□□□□□ -0.14
CPSF1-210ENST00000532935 GK5Q6ZS86 529 aa14.16□□□□□ -0.14
CPSF1-210ENST00000532935 IKBIPQ70UQ0 350 aa14.16□□□□□ -0.14
CPSF1-210ENST00000532935 TICAM1Q8IUC6 712 aa14.16□□□□□ -0.14
CPSF1-210ENST00000532935 DDIASQ8IXT1 998 aa14.16□□□□□ -0.14
CPSF1-210ENST00000532935 FAM13CQ8NE31 585 aa14.16□□□□□ -0.14
CPSF1-210ENST00000532935 OR10G3Q8NGC4 313 aa14.16□□□□□ -0.14
CPSF1-210ENST00000532935 PAQR8Q8TEZ7 354 aa14.16□□□□□ -0.14
CPSF1-210ENST00000532935 KAT2AQ92830 837 aa14.16□□□□□ -0.14
CPSF1-210ENST00000532935 RELTQ969Z4 430 aa14.16□□□□□ -0.14
CPSF1-210ENST00000532935 PGM2Q96G03 612 aa14.16□□□□□ -0.14
CPSF1-210ENST00000532935 FCRL1Q96LA6 429 aa14.16□□□□□ -0.14
CPSF1-210ENST00000532935 BBS4Q96RK4 519 aa14.16□□□□□ -0.14
CPSF1-210ENST00000532935 TTTY12Q9BZ98 90 aa14.16□□□□□ -0.14
CPSF1-210ENST00000532935 NXF5Q9H1B4 397 aaKnown RBP14.16□□□□□ -0.14
CPSF1-210ENST00000532935 ZDHHC2Q9UIJ5 367 aa14.16□□□□□ -0.14
CPSF1-210ENST00000532935 EXO1Q9UQ84 846 aaKnown RBP14.16□□□□□ -0.14
CPSF1-210ENST00000532935 ZNF835Q9Y2P0 537 aa14.16□□□□□ -0.14
CPSF1-210ENST00000532935 CHCHD2Q9Y6H1 151 aaPredicted RBP14.16□□□□□ -0.14
CPSF1-210ENST00000532935 WDR91A4D1P6 747 aa14.15□□□□□ -0.14
CPSF1-210ENST00000532935 FAM166BA8MTA8 275 aa14.15□□□□□ -0.14
CPSF1-210ENST00000532935 CAPN14A8MX76 684 aa14.15□□□□□ -0.14
CPSF1-210ENST00000532935 MYO1GB0I1T2 1018 aa14.15□□□□□ -0.14
CPSF1-210ENST00000532935 LSM1O15116 133 aaKnown RBP14.15□□□□□ -0.14
CPSF1-210ENST00000532935 BCAS2O75934 225 aaPredicted RBP14.15□□□□□ -0.14
CPSF1-210ENST00000532935 GLSO94925 669 aaPredicted RBP14.15□□□□□ -0.14
CPSF1-210ENST00000532935 MPIP34949 423 aa14.15□□□□□ -0.14
CPSF1-210ENST00000532935 PIGAP37287 484 aa14.15□□□□□ -0.14
CPSF1-210ENST00000532935 CA7P43166 264 aa14.15□□□□□ -0.14
CPSF1-210ENST00000532935 DNASE1L1P49184 302 aa14.15□□□□□ -0.14
CPSF1-210ENST00000532935 EMDP50402 254 aa14.15□□□□□ -0.14
CPSF1-210ENST00000532935 RPL38P63173 70 aaKnown RBP14.15□□□□□ -0.14
CPSF1-210ENST00000532935 HSP90B2PQ58FF3 399 aa14.15□□□□□ -0.14
CPSF1-210ENST00000532935 CMPK2Q5EBM0 449 aa14.15□□□□□ -0.14
CPSF1-210ENST00000532935 Q6ZPB1 254 aaPredicted RBP14.15□□□□□ -0.14
CPSF1-210ENST00000532935 RGS9BPQ6ZS82 235 aa14.15□□□□□ -0.14
CPSF1-210ENST00000532935 SPPL2CQ8IUH8 684 aa14.15□□□□□ -0.14
CPSF1-210ENST00000532935 CHERPQ8IWX8 916 aaKnown RBP14.15□□□□□ -0.14
CPSF1-210ENST00000532935 FAM9CQ8IZT9 166 aa14.15□□□□□ -0.14
CPSF1-210ENST00000532935 FBXW8Q8N3Y1 598 aa14.15□□□□□ -0.14
CPSF1-210ENST00000532935 GOLGA6L1Q8N7Z2 621 aa14.15□□□□□ -0.14
CPSF1-210ENST00000532935 OR52N2Q8NGI0 321 aa14.15□□□□□ -0.14
CPSF1-210ENST00000532935 OR5M3Q8NGP4 307 aa14.15□□□□□ -0.14
CPSF1-210ENST00000532935 PPP1R14CQ8TAE6 165 aa14.15□□□□□ -0.14
CPSF1-210ENST00000532935 ERP27Q96DN0 273 aa14.15□□□□□ -0.14
CPSF1-210ENST00000532935 EGLN2Q96KS0 407 aa14.15□□□□□ -0.14
CPSF1-210ENST00000532935 ITPAQ9BY32 194 aa14.15□□□□□ -0.14
CPSF1-210ENST00000532935 IL1RL2Q9HB29 575 aa14.15□□□□□ -0.14
CPSF1-210ENST00000532935 KCNK9Q9NPC2 374 aa14.15□□□□□ -0.14
CPSF1-210ENST00000532935 TAS2R7Q9NYW3 318 aa14.15□□□□□ -0.14
CPSF1-210ENST00000532935 CNIH4Q9P003 139 aa14.15□□□□□ -0.14
CPSF1-210ENST00000532935 PRODH2Q9UF12 536 aa14.15□□□□□ -0.14
CPSF1-210ENST00000532935 TMED5Q9Y3A6 229 aa14.15□□□□□ -0.14
CPSF1-210ENST00000532935 NPFFR2Q9Y5X5 522 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms