RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 SREK1Q8WXA9 508 aaKnown RBP8.22□□□□□ -1.09
CCDC90B-217ENST00000530253 CCT6BQ92526 530 aa8.22□□□□□ -1.09
CCDC90B-217ENST00000530253 ZNF75CPQ92670 426 aaPredicted RBP8.22□□□□□ -1.09
CCDC90B-217ENST00000530253 MR1Q95460 341 aa8.22□□□□□ -1.09
CCDC90B-217ENST00000530253 FKBP10Q96AY3 582 aa8.22□□□□□ -1.09
CCDC90B-217ENST00000530253 MTFMTQ96DP5 389 aaKnown RBP8.22□□□□□ -1.09
CCDC90B-217ENST00000530253 C11orf24Q96F05 449 aaPredicted RBP8.22□□□□□ -1.09
CCDC90B-217ENST00000530253 C17orf62Q9BQA9 187 aa8.22□□□□□ -1.09
CCDC90B-217ENST00000530253 SORBS1Q9BX66 1292 aaKnown RBP8.22□□□□□ -1.09
CCDC90B-217ENST00000530253 SLC26A1Q9H2B4 701 aa8.22□□□□□ -1.09
CCDC90B-217ENST00000530253 BRF2Q9HAW0 419 aa8.22□□□□□ -1.09
CCDC90B-217ENST00000530253 ANKHQ9HCJ1 492 aa8.22□□□□□ -1.09
CCDC90B-217ENST00000530253 ZNF304Q9HCX3 659 aa8.22□□□□□ -1.09
CCDC90B-217ENST00000530253 CTSFQ9UBX1 484 aa8.22□□□□□ -1.09
CCDC90B-217ENST00000530253 PADI1Q9ULC6 663 aa8.22□□□□□ -1.09
CCDC90B-217ENST00000530253 NAALAD2Q9Y3Q0 740 aa8.22□□□□□ -1.09
CCDC90B-217ENST00000530253 MAU2Q9Y6X3 613 aa8.22□□□□□ -1.09
CCDC90B-217ENST00000530253 SETXQ7Z333 2677 aaKnown RBP8.22□□□□□ -1.09
CCDC90B-217ENST00000530253 A0A0A6YYD5 115 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 URADA6NGE7 173 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 VSTM2BA6NLU5 285 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 C21orf140B9A014 251 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 ULK1O75385 1050 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 EEDO75530 441 aaKnown RBP8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 KLF7O75840 302 aaPredicted RBP8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 SNUPNO95149 360 aaKnown RBP8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 HSPA4LO95757 839 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 KLK3P07288 261 aaPredicted RBP8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 RAB40ALP0C0E4 278 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 LIFP15018 202 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 HIST1H1TP22492 207 aaPredicted RBP8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 PRPH2P23942 346 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 ATP5A1P25705 553 aaKnown RBP8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 PTX3P26022 381 aaPredicted RBP8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 CERS1P27544 350 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 TSFMP43897 325 aaKnown RBP8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 AVPR1BP47901 424 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 PLA2G16P53816 162 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 OLR1P78380 273 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 BTN3A2P78410 334 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 HMGCS1Q01581 520 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 DNASE1L3Q13609 305 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 RUNX2Q13950 521 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 ARHGAP40Q5TG30 622 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 FAM69BQ5VUD6 431 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 TTC19Q6DKK2 380 aaPredicted RBP8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 TRIM40Q6P9F5 258 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 SCIMPQ6UWF3 145 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 RGS9BPQ6ZS82 235 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 MED25Q71SY5 747 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 FGD2Q7Z6J4 655 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 CLYBLQ8N0X4 340 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 CA13Q8N1Q1 262 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 METTL4Q8N3J2 472 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 ENDOVQ8N8Q3 282 aaKnown RBP8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 GBP7Q8N8V2 638 aaPredicted RBP8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 OR2T11Q8NH01 316 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 AGR3Q8TD06 166 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 TWIST2Q8WVJ9 160 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 KCNE4Q8WWG9 221 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 MMABQ96EY8 250 aaPredicted RBP8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 C16orf92Q96LL3 132 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 SERPINI1Q99574 410 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 TBCDQ9BTW9 1192 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 MRPL1Q9BYD6 325 aaKnown RBP8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 SLC7A5P2Q9GIP4 190 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 MANSC1Q9H8J5 431 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 WDR54Q9H977 334 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 CLK4Q9HAZ1 481 aaKnown RBP8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 EML4Q9HC35 981 aaKnown RBP8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 LANCL2Q9NS86 450 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 INTS9Q9NV88 658 aaKnown RBP8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 HCN3Q9P1Z3 774 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 IL17BQ9UHF5 180 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 CDC14AQ9UNH5 594 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 SLC12A4Q9UP95 1085 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 RAP2CQ9Y3L5 183 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 PCDHGA6Q9Y5G7 932 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 ZNF462Q96JM2 2506 aa8.21□□□□□ -1.1
CCDC90B-217ENST00000530253 PRRC2CQ9Y520 2896 aaKnown RBP8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 A0A087WV48 116 aa8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 PIP5K1BO14986 540 aa8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 CHST10O43529 356 aa8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 TMPRSS11DO60235 418 aa8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 JRKO75564 520 aa8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 RSL1D1O76021 490 aaKnown RBP8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 UMODP07911 640 aa8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 TCN2P20062 427 aa8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 AGXTP21549 392 aa8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 DLSTP36957 453 aa8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 SSR2P43308 183 aa8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 MTTPP55157 894 aa8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 RPS18P62269 152 aaKnown RBP8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 RAE1P78406 368 aaKnown RBP8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 PHEXP78562 749 aa8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 TLE3Q04726 772 aa8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 HNRNPA0Q13151 305 aaKnown RBP8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 KIAA0040Q15053 153 aa8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 HSP90B2PQ58FF3 399 aa8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 ATG16L1Q676U5 607 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms