RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 PCOLCEQ15113 449 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 TGIF1Q15583 401 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 TRMT5Q32P41 509 aaKnown RBP7.39□□□□□ -1.23
SSBP3-211ENST00000528787 CYP27C1Q4G0S4 372 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 TIGD2Q4W5G0 525 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 ZNF628Q5EBL2 1059 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 ABHD17BQ5VST6 288 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 OPN5Q6U736 354 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 ANGPTL8Q6UXH0 198 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 SZRD1Q7Z422 152 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 VASH2Q86V25 355 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 OR4N5Q8IXE1 308 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 GALNT16Q8N428 558 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 KRTCAP2Q8N6L1 136 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 NUP43Q8NFH3 380 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 OR8J3Q8NGG0 315 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 OR9A2Q8NGT5 310 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 SUN3Q8TAQ9 357 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 ADAMTS15Q8TE58 950 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 PTPMT1Q8WUK0 201 aaPredicted RBP7.39□□□□□ -1.23
SSBP3-211ENST00000528787 TSLPQ969D9 159 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 NCLNQ969V3 563 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 MARK4Q96L34 752 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 IMMP1LQ96LU5 166 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 LMF1Q96S06 567 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 SLC35A5Q9BS91 424 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 CCDC106Q9BWC9 280 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 TMEM121BQ9BXQ6 578 aaPredicted RBP7.39□□□□□ -1.23
SSBP3-211ENST00000528787 ACTRT3Q9BYD9 372 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 ING2Q9H160 280 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 MYLK2Q9H1R3 596 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 GLIPR2Q9H4G4 154 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 ARMC7Q9H6L4 198 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 AKIRIN1Q9H9L7 192 aaPredicted RBP7.39□□□□□ -1.23
SSBP3-211ENST00000528787 ZNF160Q9HCG1 818 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 POLE3Q9NRF9 147 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 DUSP22Q9NRW4 184 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 MAT2BQ9NZL9 334 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 IL17BQ9UHF5 180 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 ZNF639Q9UID6 485 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 ERVK-19Q9WJR5 959 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 GMEB1Q9Y692 573 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 RNF103-CHMP3A0A140T963 221 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 FRG2CA6NGY1 282 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 C1QTNF9BB2RNN3 333 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 TP53I11O14683 189 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 MRASO14807 208 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 CNOT3O75175 753 aaKnown RBP7.38□□□□□ -1.23
SSBP3-211ENST00000528787 CPSF4O95639 269 aaKnown RBP7.38□□□□□ -1.23
SSBP3-211ENST00000528787 C6orf47O95873 294 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 IFNA14P01570 189 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 IGKV3-11P04433 115 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 ABCB1P08183 1280 aaPredicted RBP7.38□□□□□ -1.23
SSBP3-211ENST00000528787 GUSBP08236 651 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 C1QTNF9P0C862 333 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 PRKAR1AP10644 381 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 ATP6V1C1P21283 382 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 F8A1P23610 371 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 MC3RP41968 323 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 PPICP45877 212 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 SLC37A1P57057 533 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 RPS18P62269 152 aaKnown RBP7.38□□□□□ -1.23
SSBP3-211ENST00000528787 HBA1P69905 142 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 RNF4P78317 190 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 ID2Q02363 134 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 ZNF155Q12901 538 aaPredicted RBP7.38□□□□□ -1.23
SSBP3-211ENST00000528787 IL10RAQ13651 578 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 ATP1A4Q13733 1029 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 EFR3AQ14156 821 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 DECR1Q16698 335 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 ZSWIM7Q19AV6 140 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 TBCELQ5QJ74 424 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 LRIF1Q5T3J3 769 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 INTS11Q5TA45 600 aaKnown RBP7.38□□□□□ -1.23
SSBP3-211ENST00000528787 CDC73Q6P1J9 531 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 ERICH5Q6P6B1 374 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 TMEM107Q6UX40 140 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 ISLR2Q6UXK2 745 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 LANCL3Q6ZV70 420 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 GPR155Q7Z3F1 870 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 DHDDSQ86SQ9 333 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 SNX32Q86XE0 403 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 DTWD1Q8N5C7 304 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 ZNF527Q8NB42 609 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 FAM98AQ8NCA5 519 aaKnown RBP7.38□□□□□ -1.23
SSBP3-211ENST00000528787 TMEM52Q8NDY8 209 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 BHLHE22Q8NFJ8 381 aaPredicted RBP7.38□□□□□ -1.23
SSBP3-211ENST00000528787 OR52R1Q8NGF1 315 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 MIPOL1Q8TD10 442 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 ELP5Q8TE02 316 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 ZNF721Q8TF20 911 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 TMEM125Q96AQ2 219 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 CIDECQ96AQ7 238 aaPredicted RBP7.38□□□□□ -1.23
SSBP3-211ENST00000528787 NEURL3Q96EH8 262 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 NSL1Q96IY1 281 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 THOC3Q96J01 351 aaKnown RBP7.38□□□□□ -1.23
SSBP3-211ENST00000528787 LCORQ96JN0 433 aaPredicted RBP7.38□□□□□ -1.23
SSBP3-211ENST00000528787 SLC35G5Q96KT7 338 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 SGCZQ96LD1 299 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 SPATA5L1Q9BVQ7 753 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms