RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 JUNP05412 331 aaKnown RBP12.36□□□□□ -0.43
CAPN1-215ENST00000528396 PCSK2P16519 638 aa12.36□□□□□ -0.43
CAPN1-215ENST00000528396 SDC1P18827 310 aa12.36□□□□□ -0.43
CAPN1-215ENST00000528396 MST1P26927 711 aa12.36□□□□□ -0.43
CAPN1-215ENST00000528396 RFC3P40938 356 aa12.36□□□□□ -0.43
CAPN1-215ENST00000528396 RPL14P50914 215 aaKnown RBP12.36□□□□□ -0.43
CAPN1-215ENST00000528396 KCNK10P57789 538 aa12.36□□□□□ -0.43
CAPN1-215ENST00000528396 KCNJ2P63252 427 aa12.36□□□□□ -0.43
CAPN1-215ENST00000528396 MPP2Q14168 576 aa12.36□□□□□ -0.43
CAPN1-215ENST00000528396 PDCD2Q16342 344 aaPredicted RBP12.36□□□□□ -0.43
CAPN1-215ENST00000528396 UGT3A2Q3SY77 523 aa12.36□□□□□ -0.43
CAPN1-215ENST00000528396 RFTN2Q52LD8 501 aaPredicted RBP12.36□□□□□ -0.43
CAPN1-215ENST00000528396 KRTCAP3Q53RY4 240 aa12.36□□□□□ -0.43
CAPN1-215ENST00000528396 SLC22A10Q63ZE4 541 aa12.36□□□□□ -0.43
CAPN1-215ENST00000528396 ZNF324BQ6AW86 544 aaPredicted RBP12.36□□□□□ -0.43
CAPN1-215ENST00000528396 HDXQ7Z353 690 aa12.36□□□□□ -0.43
CAPN1-215ENST00000528396 R3HCC1LQ7Z5L2 792 aaKnown RBP12.36□□□□□ -0.43
CAPN1-215ENST00000528396 TRIM42Q8IWZ5 723 aa12.36□□□□□ -0.43
CAPN1-215ENST00000528396 ZNF615Q8N8J6 731 aa12.36□□□□□ -0.43
CAPN1-215ENST00000528396 FNDC5Q8NAU1 212 aa12.36□□□□□ -0.43
CAPN1-215ENST00000528396 CLHC1Q8NHS4 586 aa12.36□□□□□ -0.43
CAPN1-215ENST00000528396 ZNF675Q8TD23 568 aa12.36□□□□□ -0.43
CAPN1-215ENST00000528396 KAT2AQ92830 837 aa12.36□□□□□ -0.43
CAPN1-215ENST00000528396 PPCDCQ96CD2 204 aa12.36□□□□□ -0.43
CAPN1-215ENST00000528396 FAM173AQ9BQD7 235 aa12.36□□□□□ -0.43
CAPN1-215ENST00000528396 SH3BP4Q9P0V3 963 aa12.36□□□□□ -0.43
CAPN1-215ENST00000528396 EIF3LQ9Y262 564 aaKnown RBP12.36□□□□□ -0.43
CAPN1-215ENST00000528396 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.36□□□□□ -0.43
CAPN1-215ENST00000528396 POLEQ07864 2286 aa12.36□□□□□ -0.43
CAPN1-215ENST00000528396 SPTBN1Q01082 2364 aaKnown RBP12.35□□□□□ -0.43
CAPN1-215ENST00000528396 PDPK1O15530 556 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 ITM2AO43736 263 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 COQ9O75208 318 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 SLITRK5O94991 958 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 CBX7O95931 251 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 CLPSP04118 112 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 FBXO45P0C2W1 286 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 DHRS4L1P0CG22 281 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 BCKDHAP12694 445 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 CNR1P21554 472 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 GPX3P22352 226 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 TACR1P25103 407 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 ARRB2P32121 409 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 GPC1P35052 558 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 KRT20P35900 424 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 RPL3P39023 403 aaKnown RBP12.35□□□□□ -0.43
CAPN1-215ENST00000528396 TDGF1P3P51864 188 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 PER3P56645 1201 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 DCAF7P61962 342 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 DUSP2Q05923 314 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 MGAT2Q10469 447 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 MAD2L1Q13257 205 aaPredicted RBP12.35□□□□□ -0.43
CAPN1-215ENST00000528396 KIAA0040Q15053 153 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 NNATQ16517 81 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 TRMT12Q53H54 448 aaKnown RBP12.35□□□□□ -0.43
CAPN1-215ENST00000528396 ZNF628Q5EBL2 1059 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 ATG16L1Q676U5 607 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 TMEM64Q6YI46 380 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 SLC22A16Q86VW1 577 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 ZNF781Q8N8C0 355 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 C17orf47Q8NEP4 570 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 OR2M7Q8NG81 312 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 OR6Y1Q8NGX8 325 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 ZFP28Q8NHY6 868 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 PPP1R36Q96LQ0 422 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 GPR137Q96N19 417 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 C1orf50Q9BV19 199 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 ITPAQ9BY32 194 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 REEP4Q9H6H4 257 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 TAS2R9Q9NYW1 312 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 TAS2R7Q9NYW3 318 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 CNIH4Q9P003 139 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 BAIAP2L1Q9UHR4 511 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 SLC5A6Q9Y289 635 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 HIVEP3Q5T1R4 2406 aa12.35□□□□□ -0.43
CAPN1-215ENST00000528396 USP9YO00507 2555 aaPredicted RBP12.34□□□□□ -0.43
CAPN1-215ENST00000528396 FAM166BA8MTA8 275 aa12.34□□□□□ -0.43
CAPN1-215ENST00000528396 MYO1GB0I1T2 1018 aa12.34□□□□□ -0.43
CAPN1-215ENST00000528396 ACOX3O15254 700 aa12.34□□□□□ -0.43
CAPN1-215ENST00000528396 CDC40O60508 579 aaKnown RBP eCLIP12.34□□□□□ -0.43
CAPN1-215ENST00000528396 ZNF354AO60765 605 aaPredicted RBP12.34□□□□□ -0.43
CAPN1-215ENST00000528396 NADKO95544 446 aaPredicted RBP12.34□□□□□ -0.43
CAPN1-215ENST00000528396 CCL3P10147 92 aa12.34□□□□□ -0.43
CAPN1-215ENST00000528396 PRPS2P11908 318 aa12.34□□□□□ -0.43
CAPN1-215ENST00000528396 S1PR1P21453 382 aa12.34□□□□□ -0.43
CAPN1-215ENST00000528396 SLC18A1P54219 525 aa12.34□□□□□ -0.43
CAPN1-215ENST00000528396 PLCXD2Q0VAA5 305 aa12.34□□□□□ -0.43
CAPN1-215ENST00000528396 BST1Q10588 318 aa12.34□□□□□ -0.43
CAPN1-215ENST00000528396 ZNF155Q12901 538 aaPredicted RBP12.34□□□□□ -0.43
CAPN1-215ENST00000528396 RPS6KA2Q15349 733 aa12.34□□□□□ -0.43
CAPN1-215ENST00000528396 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.34□□□□□ -0.43
CAPN1-215ENST00000528396 ZNF791Q3KP31 576 aaPredicted RBP12.34□□□□□ -0.43
CAPN1-215ENST00000528396 XKR7Q5GH72 579 aa12.34□□□□□ -0.43
CAPN1-215ENST00000528396 C6orf136Q5SQH8 315 aa12.34□□□□□ -0.43
CAPN1-215ENST00000528396 AGBL2Q5U5Z8 902 aa12.34□□□□□ -0.43
CAPN1-215ENST00000528396 ANKRD26P1Q6NSI1 321 aa12.34□□□□□ -0.43
CAPN1-215ENST00000528396 TMEM107Q6UX40 140 aa12.34□□□□□ -0.43
CAPN1-215ENST00000528396 RGS9BPQ6ZS82 235 aa12.34□□□□□ -0.43
CAPN1-215ENST00000528396 PRR22Q8IZ63 422 aa12.34□□□□□ -0.43
CAPN1-215ENST00000528396 GHDCQ8N2G8 530 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms